RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 DDX60LQ5H9U9 1706 aaKnown RBP-2.8□□□□□ -2.86
COMMD3-209ENST00000471350 BOD1L1Q8NFC6 3051 aa-2.8□□□□□ -2.86
COMMD3-209ENST00000471350 ITSN2Q9NZM3 1697 aa-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 LINC01546A6NGU7 62 aa-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 NDUFA4O00483 81 aa-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 RPS27P42677 84 aaKnown RBP-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 S100A10P60903 97 aa-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 KRTAP19-6Q3LI70 58 aa-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 RPS27LQ71UM5 84 aaKnown RBP-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 NOP10Q9NPE3 64 aaKnown RBP-2.81□□□□□ -2.86
COMMD3-209ENST00000471350 THOC2Q8NI27 1593 aaKnown RBP-2.82□□□□□ -2.86
COMMD3-209ENST00000471350 DEFB131BA0A096LNP1 70 aa-2.82□□□□□ -2.86
COMMD3-209ENST00000471350 MYMXA0A1B0GTQ4 84 aa-2.82□□□□□ -2.86
COMMD3-209ENST00000471350 S100PP25815 95 aa-2.82□□□□□ -2.86
COMMD3-209ENST00000471350 C2orf88Q9BSF0 95 aa-2.82□□□□□ -2.86
COMMD3-209ENST00000471350 UMAD1C9J7I0 102 aa-2.83□□□□□ -2.86
COMMD3-209ENST00000471350 BVES-AS1Q5T3Y7 98 aa-2.83□□□□□ -2.86
COMMD3-209ENST00000471350 DPY30Q9C005 99 aa-2.83□□□□□ -2.86
COMMD3-209ENST00000471350 ZFHX4Q86UP3 3567 aa-2.83□□□□□ -2.86
COMMD3-209ENST00000471350 KIAA0586Q9BVV6 1533 aa-2.83□□□□□ -2.86
COMMD3-209ENST00000471350 ACBD7Q8N6N7 88 aa-2.84□□□□□ -2.86
COMMD3-209ENST00000471350 UNC13AQ9UPW8 1703 aa-2.85□□□□□ -2.86
COMMD3-209ENST00000471350 MRPL33O75394 65 aaKnown RBP-2.85□□□□□ -2.87
COMMD3-209ENST00000471350 CCDC88BA6NC98 1476 aa-2.85□□□□□ -2.87
COMMD3-209ENST00000471350 ITSN1Q15811 1721 aa-2.85□□□□□ -2.87
COMMD3-209ENST00000471350 PRUNE2Q8WUY3 3088 aa-2.86□□□□□ -2.87
COMMD3-209ENST00000471350 H3BUA1 57 aa-2.86□□□□□ -2.87
COMMD3-209ENST00000471350 KIF1AQ12756 1690 aa-2.87□□□□□ -2.87
COMMD3-209ENST00000471350 ZC3H13Q5T200 1668 aaKnown RBP-2.87□□□□□ -2.87
COMMD3-209ENST00000471350 FREM2Q5SZK8 3169 aa-2.88□□□□□ -2.87
COMMD3-209ENST00000471350 URB2Q14146 1524 aaKnown RBP-2.88□□□□□ -2.87
COMMD3-209ENST00000471350 CRIP1P50238 77 aa-2.88□□□□□ -2.87
COMMD3-209ENST00000471350 ARFGEF2Q9Y6D5 1785 aa-2.88□□□□□ -2.87
COMMD3-209ENST00000471350 CEBPZOSA8MTT3 80 aa-2.89□□□□□ -2.87
COMMD3-209ENST00000471350 M0QZ58 72 aa-2.89□□□□□ -2.87
COMMD3-209ENST00000471350 MINOS1Q5TGZ0 78 aa-2.89□□□□□ -2.87
COMMD3-209ENST00000471350 UBR1Q8IWV7 1749 aa-2.9□□□□□ -2.87
COMMD3-209ENST00000471350 GYPAP02724 150 aa-2.9□□□□□ -2.87
COMMD3-209ENST00000471350 C20orf78Q9BR46 151 aa-2.9□□□□□ -2.87
COMMD3-209ENST00000471350 RABAC1Q9UI14 185 aa-2.9□□□□□ -2.87
COMMD3-209ENST00000471350 MYO3AQ8NEV4 1616 aa-2.9□□□□□ -2.87
COMMD3-209ENST00000471350 LINC00587B1AMM8 73 aa-2.91□□□□□ -2.88
COMMD3-209ENST00000471350 SMARCA2P51531 1590 aa-2.92□□□□□ -2.88
COMMD3-209ENST00000471350 PLCH1Q4KWH8 1693 aa-2.92□□□□□ -2.88
COMMD3-209ENST00000471350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.93□□□□□ -2.88
COMMD3-209ENST00000471350 CFAP54Q96N23 3096 aa-2.93□□□□□ -2.88
COMMD3-209ENST00000471350 SPART-AS1P0CW21 52 aa-2.93□□□□□ -2.88
COMMD3-209ENST00000471350 TMEM131LA2VDJ0 1609 aa-2.93□□□□□ -2.88
COMMD3-209ENST00000471350 CRYBG3Q68DQ2 2970 aa-2.94□□□□□ -2.88
COMMD3-209ENST00000471350 M0QY20 66 aa-2.94□□□□□ -2.88
COMMD3-209ENST00000471350 HMGA1P17096 107 aaKnown RBP-2.94□□□□□ -2.88
COMMD3-209ENST00000471350 NREPQ16612 68 aa-2.94□□□□□ -2.88
COMMD3-209ENST00000471350 NCBP2-AS2Q69YL0 99 aa-2.95□□□□□ -2.88
COMMD3-209ENST00000471350 LRRIQ1Q96JM4 1722 aa-2.96□□□□□ -2.88
COMMD3-209ENST00000471350 SFTA3P0C7M3 94 aa-2.96□□□□□ -2.88
COMMD3-209ENST00000471350 TJP1Q07157 1748 aa-2.96□□□□□ -2.88
COMMD3-209ENST00000471350 RBP2P50120 134 aa-2.97□□□□□ -2.88
COMMD3-209ENST00000471350 LINC00643Q86TS7 51 aa-2.97□□□□□ -2.88
COMMD3-209ENST00000471350 KCNQ1DNQ9H478 68 aa-2.97□□□□□ -2.88
COMMD3-209ENST00000471350 CEP162Q5TB80 1403 aa-2.97□□□□□ -2.88
COMMD3-209ENST00000471350 FCER1GP30273 86 aa-2.98□□□□□ -2.89
COMMD3-209ENST00000471350 SNRPFP62306 86 aaKnown RBP-2.98□□□□□ -2.89
COMMD3-209ENST00000471350 C6orf48Q9UBA6 75 aa-2.98□□□□□ -2.89
COMMD3-209ENST00000471350 HFM1A2PYH4 1435 aa-3□□□□□ -2.89
COMMD3-209ENST00000471350 ARHGAP35Q9NRY4 1499 aa-3□□□□□ -2.89
COMMD3-209ENST00000471350 UBL5Q9BZL1 73 aa-3□□□□□ -2.89
COMMD3-209ENST00000471350 A0A1B0GUL6 1792 aa-3□□□□□ -2.89
COMMD3-209ENST00000471350 PIK3C2BO00750 1634 aa-3.01□□□□□ -2.89
COMMD3-209ENST00000471350 NRAPQ86VF7 1730 aa-3.01□□□□□ -2.89
COMMD3-209ENST00000471350 A8MTW9 85 aa-3.01□□□□□ -2.89
COMMD3-209ENST00000471350 CNTLNQ9NXG0 1405 aa-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 NCMAPQ5T1S8 102 aa-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 TCEAL7Q9BRU2 100 aa-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 MYO15AQ9UKN7 3530 aa-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 RNF17Q9BXT8 1623 aaKnown RBP-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 RICTORQ6R327 1708 aa-3.02□□□□□ -2.89
COMMD3-209ENST00000471350 INO80Q9ULG1 1556 aaPredicted RBP-3.03□□□□□ -2.89
COMMD3-209ENST00000471350 PVALEFA0A1B0GWK0 134 aa-3.03□□□□□ -2.89
COMMD3-209ENST00000471350 C14orf144Q96I85 54 aa-3.03□□□□□ -2.89
COMMD3-209ENST00000471350 CD163L1Q9NR16 1453 aa-3.03□□□□□ -2.9
COMMD3-209ENST00000471350 ERVK-7P63135 1459 aa-3.04□□□□□ -2.9
COMMD3-209ENST00000471350 MT1FP04733 61 aa-3.05□□□□□ -2.9
COMMD3-209ENST00000471350 MED14O60244 1454 aa-3.06□□□□□ -2.9
COMMD3-209ENST00000471350 RPS29P62273 56 aaKnown RBP-3.06□□□□□ -2.9
COMMD3-209ENST00000471350 ATP5EP2Q5VTU8 51 aa-3.06□□□□□ -2.9
COMMD3-209ENST00000471350 RALGAPBQ86X10 1494 aa-3.08□□□□□ -2.9
COMMD3-209ENST00000471350 PYY3Q5JQD4 70 aa-3.08□□□□□ -2.9
COMMD3-209ENST00000471350 VPS13CQ709C8 3753 aa-3.08□□□□□ -2.9
COMMD3-209ENST00000471350 ETDCA0A1B0GVM5 59 aa-3.09□□□□□ -2.9
COMMD3-209ENST00000471350 CFAP43Q8NDM7 1665 aa-3.09□□□□□ -2.9
COMMD3-209ENST00000471350 DNMBPQ6XZF7 1577 aa-3.09□□□□□ -2.9
COMMD3-209ENST00000471350 A0A087WXM4 84 aa-3.1□□□□□ -2.91
COMMD3-209ENST00000471350 ATP6V1G2-DDX39BF2Z307 99 aa-3.1□□□□□ -2.91
COMMD3-209ENST00000471350 DEFB136Q30KP8 78 aa-3.1□□□□□ -2.91
COMMD3-209ENST00000471350 M0R143 59 aa-3.11□□□□□ -2.91
COMMD3-209ENST00000471350 S100A16Q96FQ6 103 aaKnown RBP-3.11□□□□□ -2.91
COMMD3-209ENST00000471350 PPLO60437 1756 aa-3.11□□□□□ -2.91
COMMD3-209ENST00000471350 MAP3K4Q9Y6R4 1608 aa-3.11□□□□□ -2.91
COMMD3-209ENST00000471350 SMIM13P0DJ93 91 aa-3.12□□□□□ -2.91
COMMD3-209ENST00000471350 LEAP2Q969E1 77 aa-3.12□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms