RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KRTDAPP60985 99 aa1.01□□□□□ -2.25
LSM5-209ENST00000468872 SMIM11BQ8TCY0 68 aa1.01□□□□□ -2.25
LSM5-209ENST00000468872 PRO1854Q9UHT4 67 aa1.01□□□□□ -2.25
LSM5-209ENST00000468872 TMEM14DPA8MWL7 114 aa1□□□□□ -2.25
LSM5-209ENST00000468872 SFTA2Q6UW10 78 aa1□□□□□ -2.25
LSM5-209ENST00000468872 Q6ZRX8 168 aa1□□□□□ -2.25
LSM5-209ENST00000468872 C9orf62Q8N4C0 152 aa1□□□□□ -2.25
LSM5-209ENST00000468872 LINC00472Q9H8W2 130 aa1□□□□□ -2.25
LSM5-209ENST00000468872 LINC01558Q9Y6Z2 57 aa1□□□□□ -2.25
LSM5-209ENST00000468872 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
LSM5-209ENST00000468872 A0A0D9SG42 100 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 TRBV7-7A0A0K0K1E9 115 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 F8VRH5 84 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 SFT2D2O95562 160 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 NPVFQ9HCQ7 196 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 UQCR10Q9UDW1 63 aa0.99□□□□□ -2.25
LSM5-209ENST00000468872 LOC285095A0A1B0GVY8 99 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 F2Z2F3 143 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 H7BZZ5 65 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 ATOX1O00244 68 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 APOC3P02656 99 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 HTN3P15516 51 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 COX6B2Q6YFQ2 88 aa0.98□□□□□ -2.25
LSM5-209ENST00000468872 CTXND1A0A1B0GTU2 59 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 PVALEFA0A1B0GWK0 134 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 MRPL33O75394 65 aaKnown RBP0.97□□□□□ -2.25
LSM5-209ENST00000468872 COX6CP09669 75 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 SPINK9Q5DT21 86 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 CFAP126Q5VTH2 177 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 BAGE2Q86Y30 109 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 FAM223AQ8IWN6 122 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 SERP2Q8N6R1 65 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 V9GYS6 101 aa0.97□□□□□ -2.25
LSM5-209ENST00000468872 A0A0G2JND7 137 aa0.96□□□□□ -2.26
LSM5-209ENST00000468872 UQCR11O14957 56 aa0.96□□□□□ -2.26
LSM5-209ENST00000468872 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
LSM5-209ENST00000468872 NXT2Q9NPJ8 142 aaKnown RBP0.96□□□□□ -2.26
LSM5-209ENST00000468872 PLAC8Q9NZF1 115 aa0.96□□□□□ -2.26
LSM5-209ENST00000468872 FAM223BA6NKX1 122 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 NDUFC1O43677 76 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 WFDC2Q14508 124 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 TMEM170BQ5T4T1 132 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 SPRR4Q96PI1 79 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 TRGV9Q99603 122 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 CACFD1Q9UGQ2 172 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 HILPDAQ9Y5L2 63 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 ARL2-SNX15V9GYD0 113 aa0.95□□□□□ -2.26
LSM5-209ENST00000468872 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
LSM5-209ENST00000468872 SYS1-DBNDD2H3BUS1 97 aa0.94□□□□□ -2.26
LSM5-209ENST00000468872 TRAPPC2P0DI81 140 aa0.94□□□□□ -2.26
LSM5-209ENST00000468872 TRAPPC2BP0DI82 140 aa0.94□□□□□ -2.26
LSM5-209ENST00000468872 C20orf78Q9BR46 151 aa0.94□□□□□ -2.26
LSM5-209ENST00000468872 M0R1W7 72 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 CCL22O00626 93 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 GYPAP02724 150 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 FAUP35544 74 aaKnown RBP0.93□□□□□ -2.26
LSM5-209ENST00000468872 FXYD6P3P58550 94 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 SPINK6Q6UWN8 80 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 PRO1933Q9H354 126 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 Q9H521 79 aa0.93□□□□□ -2.26
LSM5-209ENST00000468872 TRBV25-1A0A075B6N4 114 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 GCHFRP30047 84 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 DEFB114Q30KQ6 69 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 PYY3Q5JQD4 70 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 SMIM4Q8WVI0 70 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 FAM103A1Q9BTL3 118 aaKnown RBP0.92□□□□□ -2.26
LSM5-209ENST00000468872 PRR15LQ9BU68 103 aa0.92□□□□□ -2.26
LSM5-209ENST00000468872 M0R3E3 92 aa0.91□□□□□ -2.26
LSM5-209ENST00000468872 SAA2P0DJI9 122 aaPredicted RBP0.91□□□□□ -2.26
LSM5-209ENST00000468872 COX17Q14061 63 aa0.91□□□□□ -2.26
LSM5-209ENST00000468872 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
LSM5-209ENST00000468872 HIGD1BQ9P298 99 aa0.9□□□□□ -2.27
LSM5-209ENST00000468872 K7EP34 96 aa0.89□□□□□ -2.27
LSM5-209ENST00000468872 MGPP08493 103 aa0.89□□□□□ -2.27
LSM5-209ENST00000468872 NMBP08949 121 aa0.89□□□□□ -2.27
LSM5-209ENST00000468872 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
LSM5-209ENST00000468872 PMCHL1Q16048 86 aa0.87□□□□□ -2.27
LSM5-209ENST00000468872 TDRG1Q3Y452 100 aa0.87□□□□□ -2.27
LSM5-209ENST00000468872 KAAG1Q9UBP8 84 aa0.87□□□□□ -2.27
LSM5-209ENST00000468872 A0A087WVE0 104 aa0.86□□□□□ -2.27
LSM5-209ENST00000468872 SNRPFP62306 86 aaKnown RBP0.86□□□□□ -2.27
LSM5-209ENST00000468872 TMEM263Q8WUH6 116 aaKnown RBP0.86□□□□□ -2.27
LSM5-209ENST00000468872 A0A1B0GWA3 101 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 C7orf77A4D0Y5 90 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 PSMG4Q5JS54 123 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 MINOS1Q5TGZ0 78 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 C10orf113Q5VZT2 155 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 Q6JHZ5 121 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 SSBP3-AS1Q7Z2R9 100 aa0.85□□□□□ -2.27
LSM5-209ENST00000468872 ZNF815PA8K554 130 aa0.84□□□□□ -2.27
LSM5-209ENST00000468872 PSENENQ9NZ42 101 aa0.84□□□□□ -2.27
LSM5-209ENST00000468872 F8WEM9 126 aa0.83□□□□□ -2.28
LSM5-209ENST00000468872 BCE1O60756 84 aa0.82□□□□□ -2.28
LSM5-209ENST00000468872 ARMS2P0C7Q2 107 aa0.82□□□□□ -2.28
LSM5-209ENST00000468872 DEFA5Q01523 94 aa0.82□□□□□ -2.28
LSM5-209ENST00000468872 GAFA1Q96PS6 74 aa0.82□□□□□ -2.28
LSM5-209ENST00000468872 CYB5AP00167 134 aa0.81□□□□□ -2.28
LSM5-209ENST00000468872 MT1BP07438 61 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms