RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 COX8AP10176 69 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 ELOF1P60002 83 aaKnown RBP1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 UBE2D3P61077 147 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 UBE2D2P62837 147 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 BVES-AS1Q5T3Y7 98 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 COA5Q86WW8 74 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 WFDC10BQ8IUB3 73 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 CDKN2A-AS1Q9UH64 79 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
HMGB1P25-201ENST00000468402 PRKDCP78527 4128 aaKnown RBP1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 TRBV25-1A0A075B6N4 114 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 TRBV6-5A0A0K0K1A5 114 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 H3BUT2 72 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 M0R2N4 97 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 BCE1O60756 84 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 PPP1R17O96001 155 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 ACYP1P07311 99 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 KRTAP10-1P60331 282 aa1.82□□□□□ -2.12
HMGB1P25-201ENST00000468402 CSMD3Q7Z407 3707 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 DEFB131BA0A096LNP1 70 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 MYMXA0A1B0GTQ4 84 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 A0A1W2PPM0 123 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 SPART-AS1P0CW21 52 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 SMIM13P0DJ93 91 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 PDE6GP18545 87 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 UBE2D1P51668 147 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 SPAG11BQ08648 103 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 ETDBQ3ZM63 59 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 SPAG11AQ6PDA7 123 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 MUSTN1Q8IVN3 82 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 C20orf197Q8N268 126 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 WFDC9Q8NEX5 89 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 VPS13DQ5THJ4 4388 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 NBEAL1Q6ZS30 2694 aa1.81□□□□□ -2.12
HMGB1P25-201ENST00000468402 RYR3Q15413 4870 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 LINC00959A0A1B0GUT2 108 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 NCR3O14931 201 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 PLNP26678 52 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 LINC00158P58513 81 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 TPRXLQ17RH7 258 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 AMELXQ99217 191 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 PRO0255Q9UI72 69 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 STARD9Q9P2P6 4700 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 TENM2Q9NT68 2774 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
HMGB1P25-201ENST00000468402 TRAV22A0A0B4J277 110 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 ENHOQ6UWT2 76 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 UNQ6190/PRO20217Q6UXQ8 127 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 COX7B2Q8TF08 81 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 HYDINQ4G0P3 5121 aa1.79□□□□□ -2.12
HMGB1P25-201ENST00000468402 DNAH17Q9UFH2 4485 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 DNAH2Q9P225 4427 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 ALMS1Q8TCU4 4167 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 DNAH6Q9C0G6 4158 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 KRTAP10-10P60014 251 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 WFDC2Q14508 124 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 SPACA4Q8TDM5 124 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 MGAM2Q2M2H8 2515 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 HECTD4Q9Y4D8 3996 aa1.78□□□□□ -2.12
HMGB1P25-201ENST00000468402 TGP01266 2768 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 LOC101927531A0A1B0GV80 90 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 INE1O15225 51 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 RPL37AP61513 92 aaKnown RBP1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 HAMPP81172 84 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 LELP1Q5T871 98 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 LINC00643Q86TS7 51 aa1.77□□□□□ -2.13
HMGB1P25-201ENST00000468402 KMT2AQ03164 3969 aa1.76□□□□□ -2.13
HMGB1P25-201ENST00000468402 NDUFA1O15239 70 aa1.76□□□□□ -2.13
HMGB1P25-201ENST00000468402 CCL18P55774 89 aa1.76□□□□□ -2.13
HMGB1P25-201ENST00000468402 HIGD1BQ9P298 99 aa1.76□□□□□ -2.13
HMGB1P25-201ENST00000468402 KMT2CQ8NEZ4 4911 aaKnown RBP1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 H7BZZ5 65 aa1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 KLKP1Q107X0 134 aa1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 C6orf48Q9UBA6 75 aa1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 APLNQ9ULZ1 77 aa1.75□□□□□ -2.13
HMGB1P25-201ENST00000468402 DNAH8Q96JB1 4490 aa1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 LY6G6CO95867 125 aa1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 KRTAP21-3Q3LHN1 58 aa1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 Q5VV11 94 aa1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 DNAH11Q96DT5 4516 aa1.74□□□□□ -2.13
HMGB1P25-201ENST00000468402 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 PKD1P98161 4303 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 MEGF8Q7Z7M0 2845 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 SMIM11BQ8TCY0 68 aa1.73□□□□□ -2.13
HMGB1P25-201ENST00000468402 UQCR11O14957 56 aa1.72□□□□□ -2.13
HMGB1P25-201ENST00000468402 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
HMGB1P25-201ENST00000468402 LINC01556Q5JQF7 62 aa1.72□□□□□ -2.13
HMGB1P25-201ENST00000468402 Q6ZQY7 126 aa1.72□□□□□ -2.13
HMGB1P25-201ENST00000468402 Q8IZM0 81 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms