RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TLN2Q9Y4G6 2542 aa-1.07□□□□□ -2.58
ATG3-204ENST00000467275 RANBP2P49792 3224 aaKnown RBP-1.07□□□□□ -2.58
ATG3-204ENST00000467275 ITPR2Q14571 2701 aa-1.07□□□□□ -2.58
ATG3-204ENST00000467275 LRBAP50851 2863 aa-1.08□□□□□ -2.58
ATG3-204ENST00000467275 MT1EP04732 61 aa-1.08□□□□□ -2.58
ATG3-204ENST00000467275 MT1BP07438 61 aa-1.08□□□□□ -2.58
ATG3-204ENST00000467275 MT1GP13640 62 aa-1.08□□□□□ -2.58
ATG3-204ENST00000467275 MT1MQ8N339 61 aa-1.08□□□□□ -2.58
ATG3-204ENST00000467275 DEFB110Q30KQ9 67 aa-1.09□□□□□ -2.58
ATG3-204ENST00000467275 DDX60LQ5H9U9 1706 aaKnown RBP-1.09□□□□□ -2.58
ATG3-204ENST00000467275 PIK3C2BO00750 1634 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 UMAD1C9J7I0 102 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 LYNX1G3V0Z9 82 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 MT2AP02795 61 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 PRLHP81277 87 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 TDRG1Q3Y452 100 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 MT1LQ93083 61 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 S4R3F8 94 aa-1.1□□□□□ -2.59
ATG3-204ENST00000467275 DMXL2Q8TDJ6 3036 aa-1.11□□□□□ -2.59
ATG3-204ENST00000467275 IFI6P09912 130 aa-1.11□□□□□ -2.59
ATG3-204ENST00000467275 IFI27P40305 119 aaPredicted RBP-1.11□□□□□ -2.59
ATG3-204ENST00000467275 SMR3BP02814 79 aaPredicted RBP-1.12□□□□□ -2.59
ATG3-204ENST00000467275 SPTAN1Q13813 2472 aaKnown RBP-1.12□□□□□ -2.59
ATG3-204ENST00000467275 CCDC88BA6NC98 1476 aa-1.12□□□□□ -2.59
ATG3-204ENST00000467275 KANTRA0A1W2PQU2 76 aa-1.13□□□□□ -2.59
ATG3-204ENST00000467275 PLCH1Q4KWH8 1693 aa-1.13□□□□□ -2.59
ATG3-204ENST00000467275 CDC42BPGQ6DT37 1551 aa-1.14□□□□□ -2.59
ATG3-204ENST00000467275 BPTFQ12830 3046 aa-1.14□□□□□ -2.59
ATG3-204ENST00000467275 SPTBN5Q9NRC6 3674 aaKnown RBP-1.14□□□□□ -2.59
ATG3-204ENST00000467275 ATMQ13315 3056 aa-1.15□□□□□ -2.59
ATG3-204ENST00000467275 DEFB130BP0DP73 79 aa-1.15□□□□□ -2.59
ATG3-204ENST00000467275 DEFB130AP0DP74 79 aa-1.15□□□□□ -2.59
ATG3-204ENST00000467275 ADGRG4Q8IZF6 3080 aa-1.15□□□□□ -2.59
ATG3-204ENST00000467275 NDUFA4O00483 81 aa-1.16□□□□□ -2.6
ATG3-204ENST00000467275 KRTAP19-6Q3LI70 58 aa-1.16□□□□□ -2.6
ATG3-204ENST00000467275 CDC42BPAQ5VT25 1732 aa-1.16□□□□□ -2.6
ATG3-204ENST00000467275 BOD1L1Q8NFC6 3051 aa-1.17□□□□□ -2.6
ATG3-204ENST00000467275 DEFB121Q5J5C9 76 aa-1.17□□□□□ -2.6
ATG3-204ENST00000467275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.17□□□□□ -2.6
ATG3-204ENST00000467275 UACAQ9BZF9 1416 aa-1.17□□□□□ -2.6
ATG3-204ENST00000467275 ITSN1Q15811 1721 aa-1.18□□□□□ -2.6
ATG3-204ENST00000467275 IAPPP10997 89 aa-1.18□□□□□ -2.6
ATG3-204ENST00000467275 NREPQ16612 68 aa-1.18□□□□□ -2.6
ATG3-204ENST00000467275 CLPSL2Q6UWE3 100 aa-1.18□□□□□ -2.6
ATG3-204ENST00000467275 TJP1Q07157 1748 aa-1.18□□□□□ -2.6
ATG3-204ENST00000467275 CFAP43Q8NDM7 1665 aa-1.19□□□□□ -2.6
ATG3-204ENST00000467275 MGAQ8IWI9 3026 aa-1.19□□□□□ -2.6
ATG3-204ENST00000467275 ATP5EP2Q5VTU8 51 aa-1.19□□□□□ -2.6
ATG3-204ENST00000467275 CSMD2Q7Z408 3487 aa-1.2□□□□□ -2.6
ATG3-204ENST00000467275 RICTORQ6R327 1708 aa-1.2□□□□□ -2.6
ATG3-204ENST00000467275 KRTAP8-1Q8IUC2 63 aa-1.2□□□□□ -2.6
ATG3-204ENST00000467275 DEFB131BA0A096LNP1 70 aa-1.21□□□□□ -2.6
ATG3-204ENST00000467275 HMGA1P17096 107 aaKnown RBP-1.21□□□□□ -2.6
ATG3-204ENST00000467275 ST20Q9HBF5 79 aa-1.21□□□□□ -2.6
ATG3-204ENST00000467275 ZFHX4Q86UP3 3567 aa-1.21□□□□□ -2.6
ATG3-204ENST00000467275 ZC3H13Q5T200 1668 aaKnown RBP-1.23□□□□□ -2.61
ATG3-204ENST00000467275 FREM2Q5SZK8 3169 aa-1.23□□□□□ -2.61
ATG3-204ENST00000467275 PRUNE2Q8WUY3 3088 aa-1.23□□□□□ -2.61
ATG3-204ENST00000467275 A0A087WXM4 84 aa-1.24□□□□□ -2.61
ATG3-204ENST00000467275 SMIM13P0DJ93 91 aa-1.24□□□□□ -2.61
ATG3-204ENST00000467275 ANKRD36CQ5JPF3 1778 aa-1.24□□□□□ -2.61
ATG3-204ENST00000467275 ADIRFQ15847 76 aa-1.25□□□□□ -2.61
ATG3-204ENST00000467275 DEFB106AQ8N104 65 aa-1.25□□□□□ -2.61
ATG3-204ENST00000467275 THOC2Q8NI27 1593 aaKnown RBP-1.25□□□□□ -2.61
ATG3-204ENST00000467275 DEFB4AO15263 64 aa-1.26□□□□□ -2.61
ATG3-204ENST00000467275 TNP1P09430 55 aa-1.26□□□□□ -2.61
ATG3-204ENST00000467275 GNG2P59768 71 aa-1.26□□□□□ -2.61
ATG3-204ENST00000467275 RNF17Q9BXT8 1623 aaKnown RBP-1.26□□□□□ -2.61
ATG3-204ENST00000467275 MYO15AQ9UKN7 3530 aa-1.27□□□□□ -2.61
ATG3-204ENST00000467275 KDM5DQ9BY66 1539 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 MED14O60244 1454 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 H3BUT2 72 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 MRPL33O75394 65 aaKnown RBP-1.28□□□□□ -2.61
ATG3-204ENST00000467275 MT1FP04733 61 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 S100A13Q99584 98 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 KCNQ1DNQ9H478 68 aa-1.28□□□□□ -2.61
ATG3-204ENST00000467275 MMP24-AS1A0A0U1RRL7 71 aa-1.29□□□□□ -2.62
ATG3-204ENST00000467275 CRYBG3Q68DQ2 2970 aa-1.29□□□□□ -2.62
ATG3-204ENST00000467275 DMDP11532 3685 aa-1.29□□□□□ -2.62
ATG3-204ENST00000467275 DCAF1Q9Y4B6 1507 aa-1.3□□□□□ -2.62
ATG3-204ENST00000467275 ARHGAP35Q9NRY4 1499 aa-1.3□□□□□ -2.62
ATG3-204ENST00000467275 CRIP1P50238 77 aa-1.3□□□□□ -2.62
ATG3-204ENST00000467275 ABCC1P33527 1531 aa-1.3□□□□□ -2.62
ATG3-204ENST00000467275 KIAA0586Q9BVV6 1533 aa-1.3□□□□□ -2.62
ATG3-204ENST00000467275 CD163L1Q9NR16 1453 aa-1.31□□□□□ -2.62
ATG3-204ENST00000467275 ITSN2Q9NZM3 1697 aa-1.31□□□□□ -2.62
ATG3-204ENST00000467275 VPS13CQ709C8 3753 aa-1.31□□□□□ -2.62
ATG3-204ENST00000467275 PARP4Q9UKK3 1724 aaKnown RBP-1.32□□□□□ -2.62
ATG3-204ENST00000467275 TOGARAM1Q9Y4F4 1720 aa-1.32□□□□□ -2.62
ATG3-204ENST00000467275 BVES-AS1Q5T3Y7 98 aa-1.32□□□□□ -2.62
ATG3-204ENST00000467275 UBL5Q9BZL1 73 aa-1.32□□□□□ -2.62
ATG3-204ENST00000467275 ERVK-7P63135 1459 aa-1.32□□□□□ -2.62
ATG3-204ENST00000467275 SPEGQ15772 3267 aa-1.32□□□□□ -2.62
ATG3-204ENST00000467275 LINC01546A6NGU7 62 aa-1.33□□□□□ -2.62
ATG3-204ENST00000467275 WT1-ASQ06250 92 aa-1.33□□□□□ -2.62
ATG3-204ENST00000467275 HFM1A2PYH4 1435 aa-1.33□□□□□ -2.62
ATG3-204ENST00000467275 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.33□□□□□ -2.62
ATG3-204ENST00000467275 SMARCA2P51531 1590 aa-1.34□□□□□ -2.62
ATG3-204ENST00000467275 RB1CC1Q8TDY2 1594 aa-1.34□□□□□ -2.62
ATG3-204ENST00000467275 LY75O60449 1722 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms