RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TPRXLQ17RH7 258 aa3.18□□□□□ -1.9
LRCH3-212ENST00000466845 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
LRCH3-212ENST00000466845 A0A1B0GU69 56 aa3.17□□□□□ -1.9
LRCH3-212ENST00000466845 MINOS1Q5TGZ0 78 aa3.17□□□□□ -1.9
LRCH3-212ENST00000466845 LINC00308Q8TCZ7 52 aa3.17□□□□□ -1.9
LRCH3-212ENST00000466845 SMIM2Q9BVW6 85 aa3.17□□□□□ -1.9
LRCH3-212ENST00000466845 MEGF8Q7Z7M0 2845 aa3.17□□□□□ -1.9
LRCH3-212ENST00000466845 A0A0G2JQZ4 141 aa3.16□□□□□ -1.9
LRCH3-212ENST00000466845 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
LRCH3-212ENST00000466845 PKD1L1Q8TDX9 2849 aa3.15□□□□□ -1.91
LRCH3-212ENST00000466845 LINC00315P59091 139 aa3.14□□□□□ -1.91
LRCH3-212ENST00000466845 PIGYQ3MUY2 71 aa3.14□□□□□ -1.91
LRCH3-212ENST00000466845 NOTCH1P46531 2555 aa3.14□□□□□ -1.91
LRCH3-212ENST00000466845 WNK1Q9H4A3 2382 aa3.14□□□□□ -1.91
LRCH3-212ENST00000466845 IGLV6-57P01721 117 aa3.13□□□□□ -1.91
LRCH3-212ENST00000466845 HRES1P13985 223 aa3.13□□□□□ -1.91
LRCH3-212ENST00000466845 CRIP1P50238 77 aa3.13□□□□□ -1.91
LRCH3-212ENST00000466845 LEAP2Q969E1 77 aa3.13□□□□□ -1.91
LRCH3-212ENST00000466845 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
LRCH3-212ENST00000466845 VWFP04275 2813 aa3.12□□□□□ -1.91
LRCH3-212ENST00000466845 NDUFA1O15239 70 aa3.11□□□□□ -1.91
LRCH3-212ENST00000466845 TGP01266 2768 aa3.11□□□□□ -1.91
LRCH3-212ENST00000466845 ACYP2P14621 99 aa3.1□□□□□ -1.91
LRCH3-212ENST00000466845 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
LRCH3-212ENST00000466845 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
LRCH3-212ENST00000466845 Q8N9L7 120 aa3.1□□□□□ -1.91
LRCH3-212ENST00000466845 SMIM11BQ8TCY0 68 aa3.1□□□□□ -1.91
LRCH3-212ENST00000466845 LINC00158P58513 81 aa3.09□□□□□ -1.91
LRCH3-212ENST00000466845 C10orf55Q5SWW7 151 aa3.09□□□□□ -1.91
LRCH3-212ENST00000466845 C10orf99Q6UWK7 81 aa3.09□□□□□ -1.91
LRCH3-212ENST00000466845 DEFB131BA0A096LNP1 70 aa3.08□□□□□ -1.92
LRCH3-212ENST00000466845 M0R2N4 97 aa3.08□□□□□ -1.92
LRCH3-212ENST00000466845 DEFB136Q30KP8 78 aa3.08□□□□□ -1.92
LRCH3-212ENST00000466845 Q6ZQY7 126 aa3.08□□□□□ -1.92
LRCH3-212ENST00000466845 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
LRCH3-212ENST00000466845 CMYA5Q8N3K9 4069 aa3.07□□□□□ -1.92
LRCH3-212ENST00000466845 K7EIL1 84 aa3.06□□□□□ -1.92
LRCH3-212ENST00000466845 RPL39P5Q59GN2 51 aa3.06□□□□□ -1.92
LRCH3-212ENST00000466845 G3V318 75 aa3.05□□□□□ -1.92
LRCH3-212ENST00000466845 H3BRN7 92 aa3.05□□□□□ -1.92
LRCH3-212ENST00000466845 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
LRCH3-212ENST00000466845 H3BUA1 57 aa3.03□□□□□ -1.92
LRCH3-212ENST00000466845 SSBP3-AS1Q7Z2R9 100 aa3.03□□□□□ -1.92
LRCH3-212ENST00000466845 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
LRCH3-212ENST00000466845 CDKN2A-AS1Q9UH64 79 aa3.03□□□□□ -1.92
LRCH3-212ENST00000466845 SORL1Q92673 2214 aa3.03□□□□□ -1.93
LRCH3-212ENST00000466845 IGKV2-28A0A075B6P5 120 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 INE1O15225 51 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 LY6G6CO95867 125 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 IGKV2D-28P01615 120 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 APELAP0DMC3 54 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 Q8IZM0 81 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 USMG5Q96IX5 58 aa3.02□□□□□ -1.93
LRCH3-212ENST00000466845 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
LRCH3-212ENST00000466845 DNAH3Q8TD57 4116 aa3.01□□□□□ -1.93
LRCH3-212ENST00000466845 POLR2KP53803 58 aaKnown RBP2.99□□□□□ -1.93
LRCH3-212ENST00000466845 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
LRCH3-212ENST00000466845 TENM3Q9P273 2699 aa2.99□□□□□ -1.93
LRCH3-212ENST00000466845 TMEM167AQ8TBQ9 72 aa2.98□□□□□ -1.93
LRCH3-212ENST00000466845 STAB2Q8WWQ8 2551 aa2.97□□□□□ -1.93
LRCH3-212ENST00000466845 ANGP03950 147 aaKnown RBP2.97□□□□□ -1.93
LRCH3-212ENST00000466845 Q6ZRX8 168 aa2.97□□□□□ -1.93
LRCH3-212ENST00000466845 COL7A1Q02388 2944 aa2.97□□□□□ -1.93
LRCH3-212ENST00000466845 NBEAL2Q6ZNJ1 2754 aa2.96□□□□□ -1.94
LRCH3-212ENST00000466845 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
LRCH3-212ENST00000466845 SPINK9Q5DT21 86 aa2.96□□□□□ -1.94
LRCH3-212ENST00000466845 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.96□□□□□ -1.94
LRCH3-212ENST00000466845 LINC00575Q6W349 94 aa2.96□□□□□ -1.94
LRCH3-212ENST00000466845 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
LRCH3-212ENST00000466845 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
LRCH3-212ENST00000466845 GVQW2A0A096LPI5 108 aaPredicted RBP2.94□□□□□ -1.94
LRCH3-212ENST00000466845 WT1-ASQ06250 92 aa2.94□□□□□ -1.94
LRCH3-212ENST00000466845 RPL39LQ96EH5 51 aaKnown RBP2.94□□□□□ -1.94
LRCH3-212ENST00000466845 PRCDQ00LT1 54 aa2.93□□□□□ -1.94
LRCH3-212ENST00000466845 ALMS1Q8TCU4 4167 aa2.92□□□□□ -1.94
LRCH3-212ENST00000466845 K7EIM0 57 aa2.92□□□□□ -1.94
LRCH3-212ENST00000466845 KLK9Q2XQG4 91 aa2.92□□□□□ -1.94
LRCH3-212ENST00000466845 DEFB135Q30KP9 77 aa2.92□□□□□ -1.94
LRCH3-212ENST00000466845 RHPN1-AS1Q9BWJ2 59 aa2.92□□□□□ -1.94
LRCH3-212ENST00000466845 I3L2K1 104 aa2.91□□□□□ -1.94
LRCH3-212ENST00000466845 CRIPTQ9P021 101 aa2.91□□□□□ -1.94
LRCH3-212ENST00000466845 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.95
LRCH3-212ENST00000466845 DEFB131AP59861 70 aa2.89□□□□□ -1.95
LRCH3-212ENST00000466845 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
LRCH3-212ENST00000466845 KMT2CQ8NEZ4 4911 aaKnown RBP2.89□□□□□ -1.95
LRCH3-212ENST00000466845 DNAH9Q9NYC9 4486 aa2.89□□□□□ -1.95
LRCH3-212ENST00000466845 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
LRCH3-212ENST00000466845 K7EQZ3 153 aa2.87□□□□□ -1.95
LRCH3-212ENST00000466845 DEFB4AO15263 64 aa2.87□□□□□ -1.95
LRCH3-212ENST00000466845 IGFL1Q6UW32 110 aa2.86□□□□□ -1.95
LRCH3-212ENST00000466845 RYR3Q15413 4870 aa2.86□□□□□ -1.95
LRCH3-212ENST00000466845 LYSTQ99698 3801 aa2.86□□□□□ -1.95
LRCH3-212ENST00000466845 CSMD3Q7Z407 3707 aa2.85□□□□□ -1.95
LRCH3-212ENST00000466845 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
LRCH3-212ENST00000466845 STARD9Q9P2P6 4700 aa2.85□□□□□ -1.95
LRCH3-212ENST00000466845 HUWE1Q7Z6Z7 4374 aaKnown RBP2.85□□□□□ -1.95
LRCH3-212ENST00000466845 RYR2Q92736 4967 aa2.84□□□□□ -1.95
LRCH3-212ENST00000466845 UBE2DNLQ8IWF7 75 aa2.84□□□□□ -1.95
LRCH3-212ENST00000466845 TP53AIP1Q9HCN2 124 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms