RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 IFI6P09912 130 aa-2.05□□□□□ -2.74
PTPN12-210ENST00000464313 DEFB110Q30KQ9 67 aa-2.05□□□□□ -2.74
PTPN12-210ENST00000464313 S100A16Q96FQ6 103 aaKnown RBP-2.05□□□□□ -2.74
PTPN12-210ENST00000464313 LCE6AA0A183 80 aa-2.06□□□□□ -2.74
PTPN12-210ENST00000464313 K7EP34 96 aa-2.06□□□□□ -2.74
PTPN12-210ENST00000464313 DNAH10Q8IVF4 4471 aa-2.07□□□□□ -2.74
PTPN12-210ENST00000464313 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.07□□□□□ -2.74
PTPN12-210ENST00000464313 LYNX1G3V0Z9 82 aa-2.07□□□□□ -2.74
PTPN12-210ENST00000464313 MT1GP13640 62 aa-2.07□□□□□ -2.74
PTPN12-210ENST00000464313 IFI27P40305 119 aaPredicted RBP-2.08□□□□□ -2.74
PTPN12-210ENST00000464313 Q9H521 79 aa-2.08□□□□□ -2.74
PTPN12-210ENST00000464313 FREM2Q5SZK8 3169 aa-2.08□□□□□ -2.74
PTPN12-210ENST00000464313 SPTAN1Q13813 2472 aaKnown RBP-2.09□□□□□ -2.74
PTPN12-210ENST00000464313 IAPPP10997 89 aa-2.09□□□□□ -2.74
PTPN12-210ENST00000464313 URB2Q14146 1524 aaKnown RBP-2.09□□□□□ -2.74
PTPN12-210ENST00000464313 MAGI3Q5TCQ9 1506 aa-2.1□□□□□ -2.75
PTPN12-210ENST00000464313 UMAD1C9J7I0 102 aa-2.1□□□□□ -2.75
PTPN12-210ENST00000464313 ARFGEF2Q9Y6D5 1785 aa-2.1□□□□□ -2.75
PTPN12-210ENST00000464313 DIP2BQ9P265 1576 aa-2.11□□□□□ -2.75
PTPN12-210ENST00000464313 DEFB106AQ8N104 65 aa-2.12□□□□□ -2.75
PTPN12-210ENST00000464313 CENPEQ02224 2701 aa-2.12□□□□□ -2.75
PTPN12-210ENST00000464313 MT1EP04732 61 aa-2.13□□□□□ -2.75
PTPN12-210ENST00000464313 NDUFA4O00483 81 aa-2.14□□□□□ -2.75
PTPN12-210ENST00000464313 MT1LQ93083 61 aa-2.14□□□□□ -2.75
PTPN12-210ENST00000464313 DDX60LQ5H9U9 1706 aaKnown RBP-2.14□□□□□ -2.75
PTPN12-210ENST00000464313 KRTAP19-5Q3LI72 72 aa-2.15□□□□□ -2.75
PTPN12-210ENST00000464313 CCNB3Q8WWL7 1395 aa-2.15□□□□□ -2.75
PTPN12-210ENST00000464313 RANBP2P49792 3224 aaKnown RBP-2.15□□□□□ -2.75
PTPN12-210ENST00000464313 V9GYS6 101 aa-2.16□□□□□ -2.76
PTPN12-210ENST00000464313 PIK3C2BO00750 1634 aa-2.17□□□□□ -2.76
PTPN12-210ENST00000464313 KIF14Q15058 1648 aa-2.18□□□□□ -2.76
PTPN12-210ENST00000464313 PVALEFA0A1B0GWK0 134 aa-2.19□□□□□ -2.76
PTPN12-210ENST00000464313 SMR3BP02814 79 aaPredicted RBP-2.19□□□□□ -2.76
PTPN12-210ENST00000464313 CSMD2Q7Z408 3487 aa-2.19□□□□□ -2.76
PTPN12-210ENST00000464313 ABCC3O15438 1527 aa-2.2□□□□□ -2.76
PTPN12-210ENST00000464313 SPTBN5Q9NRC6 3674 aaKnown RBP-2.2□□□□□ -2.76
PTPN12-210ENST00000464313 PLCH1Q4KWH8 1693 aa-2.2□□□□□ -2.76
PTPN12-210ENST00000464313 NREPQ16612 68 aa-2.2□□□□□ -2.76
PTPN12-210ENST00000464313 TDRG1Q3Y452 100 aa-2.22□□□□□ -2.76
PTPN12-210ENST00000464313 MAP3K4Q9Y6R4 1608 aa-2.23□□□□□ -2.77
PTPN12-210ENST00000464313 CCDC88BA6NC98 1476 aa-2.23□□□□□ -2.77
PTPN12-210ENST00000464313 PPLO60437 1756 aa-2.23□□□□□ -2.77
PTPN12-210ENST00000464313 KANTRA0A1W2PQU2 76 aa-2.24□□□□□ -2.77
PTPN12-210ENST00000464313 ANKRD36CQ5JPF3 1778 aa-2.24□□□□□ -2.77
PTPN12-210ENST00000464313 DMDP11532 3685 aa-2.24□□□□□ -2.77
PTPN12-210ENST00000464313 SPEGQ15772 3267 aa-2.25□□□□□ -2.77
PTPN12-210ENST00000464313 DEFB131BA0A096LNP1 70 aa-2.27□□□□□ -2.77
PTPN12-210ENST00000464313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.27□□□□□ -2.77
PTPN12-210ENST00000464313 ITSN1Q15811 1721 aa-2.28□□□□□ -2.77
PTPN12-210ENST00000464313 MGAQ8IWI9 3026 aa-2.28□□□□□ -2.77
PTPN12-210ENST00000464313 RICTORQ6R327 1708 aa-2.28□□□□□ -2.78
PTPN12-210ENST00000464313 A0A087WXM4 84 aa-2.29□□□□□ -2.78
PTPN12-210ENST00000464313 CDC42BPGQ6DT37 1551 aa-2.29□□□□□ -2.78
PTPN12-210ENST00000464313 CRYBG3Q68DQ2 2970 aa-2.3□□□□□ -2.78
PTPN12-210ENST00000464313 TTC37Q6PGP7 1564 aa-2.3□□□□□ -2.78
PTPN12-210ENST00000464313 MT1FP04733 61 aa-2.3□□□□□ -2.78
PTPN12-210ENST00000464313 ATP5EP2Q5VTU8 51 aa-2.3□□□□□ -2.78
PTPN12-210ENST00000464313 KRTAP8-1Q8IUC2 63 aa-2.3□□□□□ -2.78
PTPN12-210ENST00000464313 CEP350Q5VT06 3117 aa-2.31□□□□□ -2.78
PTPN12-210ENST00000464313 TJP1Q07157 1748 aa-2.32□□□□□ -2.78
PTPN12-210ENST00000464313 CFAP43Q8NDM7 1665 aa-2.32□□□□□ -2.78
PTPN12-210ENST00000464313 SMIM13P0DJ93 91 aa-2.33□□□□□ -2.78
PTPN12-210ENST00000464313 CFAP54Q96N23 3096 aa-2.34□□□□□ -2.78
PTPN12-210ENST00000464313 MRPL33O75394 65 aaKnown RBP-2.35□□□□□ -2.79
PTPN12-210ENST00000464313 CRIP1P50238 77 aa-2.35□□□□□ -2.79
PTPN12-210ENST00000464313 DEFB121Q5J5C9 76 aa-2.35□□□□□ -2.79
PTPN12-210ENST00000464313 UACAQ9BZF9 1416 aa-2.35□□□□□ -2.79
PTPN12-210ENST00000464313 ZC3H13Q5T200 1668 aaKnown RBP-2.36□□□□□ -2.79
PTPN12-210ENST00000464313 WT1-ASQ06250 92 aa-2.36□□□□□ -2.79
PTPN12-210ENST00000464313 PARP4Q9UKK3 1724 aaKnown RBP-2.37□□□□□ -2.79
PTPN12-210ENST00000464313 HMGA1P17096 107 aaKnown RBP-2.37□□□□□ -2.79
PTPN12-210ENST00000464313 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.37□□□□□ -2.79
PTPN12-210ENST00000464313 TOGARAM1Q9Y4F4 1720 aa-2.37□□□□□ -2.79
PTPN12-210ENST00000464313 KIAA0586Q9BVV6 1533 aa-2.38□□□□□ -2.79
PTPN12-210ENST00000464313 THOC2Q8NI27 1593 aaKnown RBP-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 EP400Q96L91 3159 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 KCNQ1DNQ9H478 68 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 ITSN2Q9NZM3 1697 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 DCHS1Q96JQ0 3298 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 WDFY3Q8IZQ1 3526 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 ARHGAP35Q9NRY4 1499 aa-2.39□□□□□ -2.79
PTPN12-210ENST00000464313 ST20Q9HBF5 79 aa-2.4□□□□□ -2.79
PTPN12-210ENST00000464313 UBL5Q9BZL1 73 aa-2.41□□□□□ -2.8
PTPN12-210ENST00000464313 WDFY4Q6ZS81 3184 aa-2.42□□□□□ -2.8
PTPN12-210ENST00000464313 IGLV5-48A0A075B6I7 105 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 MMP24-AS1A0A0U1RRL7 71 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 H3BUT2 72 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 ADIRFQ15847 76 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 CLPSL2Q6UWE3 100 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 HFM1A2PYH4 1435 aa-2.43□□□□□ -2.8
PTPN12-210ENST00000464313 RPS27P42677 84 aaKnown RBP-2.44□□□□□ -2.8
PTPN12-210ENST00000464313 RPS27LQ71UM5 84 aaKnown RBP-2.44□□□□□ -2.8
PTPN12-210ENST00000464313 KDM5DQ9BY66 1539 aa-2.44□□□□□ -2.8
PTPN12-210ENST00000464313 RNF17Q9BXT8 1623 aaKnown RBP-2.45□□□□□ -2.8
PTPN12-210ENST00000464313 FRYLO94915 3013 aa-2.45□□□□□ -2.8
PTPN12-210ENST00000464313 DEFB4AO15263 64 aa-2.45□□□□□ -2.8
PTPN12-210ENST00000464313 TNP1P09430 55 aa-2.46□□□□□ -2.8
PTPN12-210ENST00000464313 KIF1AQ12756 1690 aa-2.47□□□□□ -2.8
PTPN12-210ENST00000464313 RALGAPBQ86X10 1494 aa-2.47□□□□□ -2.81
PTPN12-210ENST00000464313 NRAPQ86VF7 1730 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms