RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SCXQ7RTU7 201 aa3.82□□□□□ -1.8
SMARCC1-204ENST00000462198 NCR3O14931 201 aa3.81□□□□□ -1.8
SMARCC1-204ENST00000462198 HIGD2BQ4VC39 106 aa3.81□□□□□ -1.8
SMARCC1-204ENST00000462198 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
SMARCC1-204ENST00000462198 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
SMARCC1-204ENST00000462198 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SMARCC1-204ENST00000462198 GVQW2A0A096LPI5 108 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 IGHV3OR16-9A0A0B4J2B5 98 aa3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 MP68P56378 58 aa3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 RPL37AP61513 92 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 C9orf129Q5T035 196 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 C15orf56Q8N910 161 aa3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 SMIM11BQ8TCY0 68 aa3.8□□□□□ -1.8
SMARCC1-204ENST00000462198 A0A087WYN8 130 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 HCG22E2RYF7 251 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 LINC01554Q52M75 96 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 Q5VV11 94 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 Q6ZQT0 140 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 C1orf64Q8NEQ6 169 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 CIRBP-AS1Q8TBR5 109 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
SMARCC1-204ENST00000462198 PSPHP1O15172 72 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 SPAG11BQ08648 103 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 CAMK2N2Q96S95 79 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 TOMM7Q9P0U1 55 aa3.78□□□□□ -1.8
SMARCC1-204ENST00000462198 LOC101927531A0A1B0GV80 90 aa3.77□□□□□ -1.81
SMARCC1-204ENST00000462198 CNBPP62633 177 aaKnown RBP3.77□□□□□ -1.81
SMARCC1-204ENST00000462198 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
SMARCC1-204ENST00000462198 Q9BRP9 147 aa3.77□□□□□ -1.81
SMARCC1-204ENST00000462198 LPAP08519 4548 aa3.76□□□□□ -1.81
SMARCC1-204ENST00000462198 A0A1B0GW54 56 aa3.76□□□□□ -1.81
SMARCC1-204ENST00000462198 H0Y9J4 135 aa3.76□□□□□ -1.81
SMARCC1-204ENST00000462198 CASC2Q6XLA1 102 aa3.76□□□□□ -1.81
SMARCC1-204ENST00000462198 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
SMARCC1-204ENST00000462198 A6NED7 52 aa3.75□□□□□ -1.81
SMARCC1-204ENST00000462198 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
SMARCC1-204ENST00000462198 Q8IZM0 81 aa3.75□□□□□ -1.81
SMARCC1-204ENST00000462198 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
SMARCC1-204ENST00000462198 LINC00313P59037 77 aa3.74□□□□□ -1.81
SMARCC1-204ENST00000462198 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
SMARCC1-204ENST00000462198 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
SMARCC1-204ENST00000462198 IGKV2-24A0A0C4DH68 120 aa3.73□□□□□ -1.81
SMARCC1-204ENST00000462198 H3BPC8 53 aa3.73□□□□□ -1.81
SMARCC1-204ENST00000462198 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
SMARCC1-204ENST00000462198 C6orf48Q9UBA6 75 aa3.73□□□□□ -1.81
SMARCC1-204ENST00000462198 A0A096LNI7 61 aa3.72□□□□□ -1.81
SMARCC1-204ENST00000462198 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
SMARCC1-204ENST00000462198 LINC00158P58513 81 aa3.72□□□□□ -1.81
SMARCC1-204ENST00000462198 Q8N9P0 234 aaPredicted RBP3.72□□□□□ -1.81
SMARCC1-204ENST00000462198 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
SMARCC1-204ENST00000462198 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 KRTAP10-8P60410 259 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 COX17Q14061 63 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 SPACA4Q8TDM5 124 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 LINC00208Q96KT6 92 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 HIGD2AQ9BW72 106 aa3.71□□□□□ -1.82
SMARCC1-204ENST00000462198 ETDCA0A1B0GVM5 59 aa3.7□□□□□ -1.82
SMARCC1-204ENST00000462198 PANO1I0J062 215 aa3.7□□□□□ -1.82
SMARCC1-204ENST00000462198 IGKV4-1P06312 121 aa3.7□□□□□ -1.82
SMARCC1-204ENST00000462198 LINC00575Q6W349 94 aa3.7□□□□□ -1.82
SMARCC1-204ENST00000462198 SMIM29Q86T20 159 aa3.7□□□□□ -1.82
SMARCC1-204ENST00000462198 COX7BP24311 80 aa3.69□□□□□ -1.82
SMARCC1-204ENST00000462198 MOBPQ13875 183 aa3.69□□□□□ -1.82
SMARCC1-204ENST00000462198 XAGE1AQ9HD64 81 aa3.68□□□□□ -1.82
SMARCC1-204ENST00000462198 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
SMARCC1-204ENST00000462198 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
SMARCC1-204ENST00000462198 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
SMARCC1-204ENST00000462198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-204ENST00000462198 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
SMARCC1-204ENST00000462198 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
SMARCC1-204ENST00000462198 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
SMARCC1-204ENST00000462198 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
SMARCC1-204ENST00000462198 IGLV6-57P01721 117 aa3.65□□□□□ -1.83
SMARCC1-204ENST00000462198 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
SMARCC1-204ENST00000462198 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
SMARCC1-204ENST00000462198 KCNQ1DNQ9H478 68 aa3.65□□□□□ -1.83
SMARCC1-204ENST00000462198 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
SMARCC1-204ENST00000462198 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
SMARCC1-204ENST00000462198 Q8NDZ9 215 aa3.64□□□□□ -1.83
SMARCC1-204ENST00000462198 A8MU10 97 aa3.62□□□□□ -1.83
SMARCC1-204ENST00000462198 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
SMARCC1-204ENST00000462198 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
SMARCC1-204ENST00000462198 ZNF706Q9Y5V0 76 aaPredicted RBP3.61□□□□□ -1.83
SMARCC1-204ENST00000462198 C1orf137Q5JT78 98 aa3.6□□□□□ -1.83
SMARCC1-204ENST00000462198 KRTAP11-1Q8IUC1 163 aa3.6□□□□□ -1.83
SMARCC1-204ENST00000462198 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
SMARCC1-204ENST00000462198 PRR4Q16378 134 aa3.59□□□□□ -1.83
SMARCC1-204ENST00000462198 Q6ZQY7 126 aa3.59□□□□□ -1.83
SMARCC1-204ENST00000462198 IGLV1-50A0A075B6I6 118 aa3.58□□□□□ -1.84
SMARCC1-204ENST00000462198 H0Y9P7 68 aa3.58□□□□□ -1.84
SMARCC1-204ENST00000462198 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
SMARCC1-204ENST00000462198 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
SMARCC1-204ENST00000462198 SPINK6Q6UWN8 80 aa3.58□□□□□ -1.84
SMARCC1-204ENST00000462198 COA5Q86WW8 74 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms