RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 DSCR10P59022 87 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 PKHD1P08F94 4074 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
HDAC9-219ENST00000461159 SPRR1AP35321 89 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 C9orf163Q8N9P6 203 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 FAM229AH3BQW9 127 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 K7EQZ3 153 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 CDK2AP2O75956 126 aa5.28□□□□□ -1.56
HDAC9-219ENST00000461159 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
HDAC9-219ENST00000461159 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
HDAC9-219ENST00000461159 ALMS1Q8TCU4 4167 aa5.27□□□□□ -1.57
HDAC9-219ENST00000461159 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
HDAC9-219ENST00000461159 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
HDAC9-219ENST00000461159 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
HDAC9-219ENST00000461159 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
HDAC9-219ENST00000461159 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
HDAC9-219ENST00000461159 RYR3Q15413 4870 aa5.24□□□□□ -1.57
HDAC9-219ENST00000461159 CHTF8P0CG12 524 aa5.24□□□□□ -1.57
HDAC9-219ENST00000461159 RYR2Q92736 4967 aa5.23□□□□□ -1.57
HDAC9-219ENST00000461159 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
HDAC9-219ENST00000461159 PKD1P98161 4303 aa5.23□□□□□ -1.57
HDAC9-219ENST00000461159 P0C880 135 aa5.23□□□□□ -1.57
HDAC9-219ENST00000461159 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
HDAC9-219ENST00000461159 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
HDAC9-219ENST00000461159 A0A087WTM6 91 aa5.22□□□□□ -1.57
HDAC9-219ENST00000461159 A0A096LNI7 61 aa5.21□□□□□ -1.57
HDAC9-219ENST00000461159 WFDC13Q8IUB5 93 aa5.21□□□□□ -1.57
HDAC9-219ENST00000461159 PANO1I0J062 215 aa5.21□□□□□ -1.58
HDAC9-219ENST00000461159 IGFL1Q6UW32 110 aa5.21□□□□□ -1.58
HDAC9-219ENST00000461159 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
HDAC9-219ENST00000461159 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
HDAC9-219ENST00000461159 IGLV8-61A0A075B6I0 122 aa5.19□□□□□ -1.58
HDAC9-219ENST00000461159 A0A087WSZ3 146 aa5.19□□□□□ -1.58
HDAC9-219ENST00000461159 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
HDAC9-219ENST00000461159 DEFB116Q30KQ4 102 aa5.18□□□□□ -1.58
HDAC9-219ENST00000461159 A0A1W2PNN7 141 aa5.18□□□□□ -1.58
HDAC9-219ENST00000461159 KRTAP10-2P60368 255 aa5.18□□□□□ -1.58
HDAC9-219ENST00000461159 LRP1BQ9NZR2 4599 aa5.18□□□□□ -1.58
HDAC9-219ENST00000461159 A0A0G2JQZ4 141 aa5.16□□□□□ -1.58
HDAC9-219ENST00000461159 KRTAP29-1A8MX34 341 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-219ENST00000461159 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
HDAC9-219ENST00000461159 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.16□□□□□ -1.58
HDAC9-219ENST00000461159 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.58
HDAC9-219ENST00000461159 IGLV5-52A0A0A0MRZ9 124 aa5.15□□□□□ -1.59
HDAC9-219ENST00000461159 ZNF861PO60384 105 aa5.15□□□□□ -1.59
HDAC9-219ENST00000461159 RPL37AP61513 92 aaKnown RBP5.15□□□□□ -1.59
HDAC9-219ENST00000461159 PRLHP81277 87 aa5.15□□□□□ -1.59
HDAC9-219ENST00000461159 DYNC1H1Q14204 4646 aaKnown RBP5.14□□□□□ -1.59
HDAC9-219ENST00000461159 A8MWP4 228 aa5.13□□□□□ -1.59
HDAC9-219ENST00000461159 KRTAP11-1Q8IUC1 163 aa5.13□□□□□ -1.59
HDAC9-219ENST00000461159 FAT1Q14517 4588 aa5.12□□□□□ -1.59
HDAC9-219ENST00000461159 UQCR11O14957 56 aa5.11□□□□□ -1.59
HDAC9-219ENST00000461159 HRES1P13985 223 aa5.11□□□□□ -1.59
HDAC9-219ENST00000461159 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
HDAC9-219ENST00000461159 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
HDAC9-219ENST00000461159 SPRR1BP22528 89 aa5.1□□□□□ -1.59
HDAC9-219ENST00000461159 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
HDAC9-219ENST00000461159 KRTAP10-1P60331 282 aa5.09□□□□□ -1.6
HDAC9-219ENST00000461159 LUZP6Q538Z0 58 aa5.09□□□□□ -1.6
HDAC9-219ENST00000461159 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.6
HDAC9-219ENST00000461159 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.6
HDAC9-219ENST00000461159 C8orf17Q9NRJ1 99 aa5.08□□□□□ -1.6
HDAC9-219ENST00000461159 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
HDAC9-219ENST00000461159 MMP24-AS1A0A0U1RRL7 71 aa5.07□□□□□ -1.6
HDAC9-219ENST00000461159 TP53AIP1Q9HCN2 124 aa5.06□□□□□ -1.6
HDAC9-219ENST00000461159 APOBP04114 4563 aaKnown RBP5.06□□□□□ -1.6
HDAC9-219ENST00000461159 A8MUU9 505 aa5.06□□□□□ -1.6
HDAC9-219ENST00000461159 K7ERS5 55 aa5.06□□□□□ -1.6
HDAC9-219ENST00000461159 CIRBP-AS1Q8TBR5 109 aa5.05□□□□□ -1.6
HDAC9-219ENST00000461159 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
HDAC9-219ENST00000461159 A0A1B0GU69 56 aa5.04□□□□□ -1.6
HDAC9-219ENST00000461159 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
HDAC9-219ENST00000461159 PCOTHQ58A44 107 aa5.02□□□□□ -1.61
HDAC9-219ENST00000461159 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
HDAC9-219ENST00000461159 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
HDAC9-219ENST00000461159 SMR3BP02814 79 aaPredicted RBP5□□□□□ -1.61
HDAC9-219ENST00000461159 A0A1B0GVY2 172 aa5□□□□□ -1.61
HDAC9-219ENST00000461159 Q6ZSA8 131 aa4.98□□□□□ -1.61
HDAC9-219ENST00000461159 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
HDAC9-219ENST00000461159 Q96NJ1 140 aa4.98□□□□□ -1.61
HDAC9-219ENST00000461159 ANAPC11Q9NYG5 84 aa4.98□□□□□ -1.61
HDAC9-219ENST00000461159 HSPG2P98160 4391 aa4.97□□□□□ -1.61
HDAC9-219ENST00000461159 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
HDAC9-219ENST00000461159 Q5W150 140 aa4.97□□□□□ -1.61
HDAC9-219ENST00000461159 MRPL34Q9BQ48 92 aaKnown RBP4.96□□□□□ -1.62
HDAC9-219ENST00000461159 ACYP2P14621 99 aa4.95□□□□□ -1.62
HDAC9-219ENST00000461159 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
HDAC9-219ENST00000461159 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
HDAC9-219ENST00000461159 RYR1P21817 5038 aa4.92□□□□□ -1.62
HDAC9-219ENST00000461159 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
HDAC9-219ENST00000461159 IGLV7-43P04211 117 aa4.91□□□□□ -1.62
HDAC9-219ENST00000461159 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.62
HDAC9-219ENST00000461159 MYCBP2O75592 4640 aa4.9□□□□□ -1.63
HDAC9-219ENST00000461159 LINC00304Q8N9R0 145 aa4.89□□□□□ -1.63
HDAC9-219ENST00000461159 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
HDAC9-219ENST00000461159 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms