RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 FBN3Q75N90 2809 aa4.7□□□□□ -1.66
HDAC9-218ENST00000456174 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
HDAC9-218ENST00000456174 A0A096LNI7 61 aa4.68□□□□□ -1.66
HDAC9-218ENST00000456174 KRTAP7-1Q8IUC3 87 aa4.68□□□□□ -1.66
HDAC9-218ENST00000456174 IGKV2-24A0A0C4DH68 120 aa4.68□□□□□ -1.66
HDAC9-218ENST00000456174 SPRR1AP35321 89 aa4.68□□□□□ -1.66
HDAC9-218ENST00000456174 WWC2-AS2Q96NR7 200 aa4.68□□□□□ -1.66
HDAC9-218ENST00000456174 RPL37AP8A6NKH3 93 aa4.67□□□□□ -1.66
HDAC9-218ENST00000456174 A8MWP4 228 aa4.67□□□□□ -1.66
HDAC9-218ENST00000456174 RPL37AP61513 92 aaKnown RBP4.67□□□□□ -1.66
HDAC9-218ENST00000456174 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
HDAC9-218ENST00000456174 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
HDAC9-218ENST00000456174 LY6G6CO95867 125 aa4.66□□□□□ -1.66
HDAC9-218ENST00000456174 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
HDAC9-218ENST00000456174 TGP01266 2768 aa4.66□□□□□ -1.66
HDAC9-218ENST00000456174 C1orf134Q5TEV5 83 aa4.66□□□□□ -1.66
HDAC9-218ENST00000456174 A0A087WTM6 91 aa4.65□□□□□ -1.66
HDAC9-218ENST00000456174 IGHV6-1A0A0B4J1U7 121 aa4.65□□□□□ -1.66
HDAC9-218ENST00000456174 TP53AIP1Q9HCN2 124 aa4.65□□□□□ -1.66
HDAC9-218ENST00000456174 A0A087WSZ3 146 aa4.64□□□□□ -1.67
HDAC9-218ENST00000456174 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
HDAC9-218ENST00000456174 A0A1W2PNN7 141 aa4.64□□□□□ -1.67
HDAC9-218ENST00000456174 CDK2AP2O75956 126 aa4.64□□□□□ -1.67
HDAC9-218ENST00000456174 CHTF8P0CG12 524 aa4.64□□□□□ -1.67
HDAC9-218ENST00000456174 KMT2AQ03164 3969 aa4.63□□□□□ -1.67
HDAC9-218ENST00000456174 ROMO1P60602 79 aa4.63□□□□□ -1.67
HDAC9-218ENST00000456174 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
HDAC9-218ENST00000456174 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
HDAC9-218ENST00000456174 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
HDAC9-218ENST00000456174 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
HDAC9-218ENST00000456174 DNAH2Q9P225 4427 aa4.61□□□□□ -1.67
HDAC9-218ENST00000456174 A0A0G2JQZ4 141 aa4.6□□□□□ -1.67
HDAC9-218ENST00000456174 PANO1I0J062 215 aa4.6□□□□□ -1.67
HDAC9-218ENST00000456174 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
HDAC9-218ENST00000456174 ZNF861PO60384 105 aa4.6□□□□□ -1.67
HDAC9-218ENST00000456174 SPACA4Q8TDM5 124 aa4.58□□□□□ -1.68
HDAC9-218ENST00000456174 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.58□□□□□ -1.68
HDAC9-218ENST00000456174 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
HDAC9-218ENST00000456174 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
HDAC9-218ENST00000456174 IGLV5-52A0A0A0MRZ9 124 aa4.57□□□□□ -1.68
HDAC9-218ENST00000456174 A0A1B0GU69 56 aa4.57□□□□□ -1.68
HDAC9-218ENST00000456174 UQCR11O14957 56 aa4.57□□□□□ -1.68
HDAC9-218ENST00000456174 PRLHP81277 87 aa4.56□□□□□ -1.68
HDAC9-218ENST00000456174 DNAH17Q9UFH2 4485 aa4.56□□□□□ -1.68
HDAC9-218ENST00000456174 IGLV9-49A0A0B4J1Y8 123 aa4.56□□□□□ -1.68
HDAC9-218ENST00000456174 ACYP2P14621 99 aa4.56□□□□□ -1.68
HDAC9-218ENST00000456174 HECTD4Q9Y4D8 3996 aa4.56□□□□□ -1.68
HDAC9-218ENST00000456174 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
HDAC9-218ENST00000456174 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
HDAC9-218ENST00000456174 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
HDAC9-218ENST00000456174 C8orf17Q9NRJ1 99 aa4.52□□□□□ -1.69
HDAC9-218ENST00000456174 FRAS1Q86XX4 4008 aa4.52□□□□□ -1.69
HDAC9-218ENST00000456174 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
HDAC9-218ENST00000456174 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
HDAC9-218ENST00000456174 P0C880 135 aa4.51□□□□□ -1.69
HDAC9-218ENST00000456174 SPRR1BP22528 89 aa4.51□□□□□ -1.69
HDAC9-218ENST00000456174 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
HDAC9-218ENST00000456174 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
HDAC9-218ENST00000456174 Q96NJ1 140 aa4.49□□□□□ -1.69
HDAC9-218ENST00000456174 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
HDAC9-218ENST00000456174 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
HDAC9-218ENST00000456174 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
HDAC9-218ENST00000456174 DNAH8Q96JB1 4490 aa4.48□□□□□ -1.69
HDAC9-218ENST00000456174 MRPL34Q9BQ48 92 aaKnown RBP4.47□□□□□ -1.69
HDAC9-218ENST00000456174 PKD1P98161 4303 aa4.47□□□□□ -1.69
HDAC9-218ENST00000456174 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
HDAC9-218ENST00000456174 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
HDAC9-218ENST00000456174 KRTAP10-1P60331 282 aa4.46□□□□□ -1.69
HDAC9-218ENST00000456174 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 A8MUU9 505 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 LINC00483Q53H64 154 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 Q6ZSA8 131 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
HDAC9-218ENST00000456174 Q5W150 140 aa4.41□□□□□ -1.7
HDAC9-218ENST00000456174 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
HDAC9-218ENST00000456174 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
HDAC9-218ENST00000456174 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
HDAC9-218ENST00000456174 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
HDAC9-218ENST00000456174 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
HDAC9-218ENST00000456174 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
HDAC9-218ENST00000456174 RYR2Q92736 4967 aa4.36□□□□□ -1.71
HDAC9-218ENST00000456174 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
HDAC9-218ENST00000456174 KMT2CQ8NEZ4 4911 aaKnown RBP4.34□□□□□ -1.71
HDAC9-218ENST00000456174 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.72
HDAC9-218ENST00000456174 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
HDAC9-218ENST00000456174 H0YAA0 97 aa4.32□□□□□ -1.72
HDAC9-218ENST00000456174 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
HDAC9-218ENST00000456174 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-218ENST00000456174 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
HDAC9-218ENST00000456174 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
HDAC9-218ENST00000456174 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
HDAC9-218ENST00000456174 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
HDAC9-218ENST00000456174 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
HDAC9-218ENST00000456174 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
HDAC9-218ENST00000456174 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
HDAC9-218ENST00000456174 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
HDAC9-218ENST00000456174 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
HDAC9-218ENST00000456174 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
HDAC9-218ENST00000456174 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms