RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
LSM5-208ENST00000450169 K7EIL1 84 aa5.17□□□□□ -1.58
LSM5-208ENST00000450169 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
LSM5-208ENST00000450169 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
LSM5-208ENST00000450169 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
LSM5-208ENST00000450169 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
LSM5-208ENST00000450169 ZNF706Q9Y5V0 76 aaPredicted RBP5.16□□□□□ -1.58
LSM5-208ENST00000450169 CSMD3Q7Z407 3707 aa5.15□□□□□ -1.58
LSM5-208ENST00000450169 COL6A5A8TX70 2615 aa5.15□□□□□ -1.58
LSM5-208ENST00000450169 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.59
LSM5-208ENST00000450169 ZNF861PO60384 105 aa5.14□□□□□ -1.59
LSM5-208ENST00000450169 Q5W150 140 aa5.14□□□□□ -1.59
LSM5-208ENST00000450169 KRTAP11-1Q8IUC1 163 aa5.14□□□□□ -1.59
LSM5-208ENST00000450169 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
LSM5-208ENST00000450169 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
LSM5-208ENST00000450169 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
LSM5-208ENST00000450169 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
LSM5-208ENST00000450169 NBEAL1Q6ZS30 2694 aa5.12□□□□□ -1.59
LSM5-208ENST00000450169 IGLV9-49A0A0B4J1Y8 123 aa5.11□□□□□ -1.59
LSM5-208ENST00000450169 KRTAP24-1Q3LI83 254 aa5.11□□□□□ -1.59
LSM5-208ENST00000450169 ROMO1P60602 79 aa5.11□□□□□ -1.59
LSM5-208ENST00000450169 Q8N1X5 172 aa5.07□□□□□ -1.6
LSM5-208ENST00000450169 DNAH1Q9P2D7 4330 aa5.07□□□□□ -1.6
LSM5-208ENST00000450169 CHTF8P0CG12 524 aa5.06□□□□□ -1.6
LSM5-208ENST00000450169 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
LSM5-208ENST00000450169 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
LSM5-208ENST00000450169 HUWE1Q7Z6Z7 4374 aaKnown RBP5.06□□□□□ -1.6
LSM5-208ENST00000450169 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
LSM5-208ENST00000450169 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
LSM5-208ENST00000450169 IGLV7-43P04211 117 aa5.04□□□□□ -1.6
LSM5-208ENST00000450169 LYSTQ99698 3801 aa5.02□□□□□ -1.61
LSM5-208ENST00000450169 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
LSM5-208ENST00000450169 SPINK6Q6UWN8 80 aa5.01□□□□□ -1.61
LSM5-208ENST00000450169 A8MUU9 505 aa5□□□□□ -1.61
LSM5-208ENST00000450169 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
LSM5-208ENST00000450169 DNAH9Q9NYC9 4486 aa4.99□□□□□ -1.61
LSM5-208ENST00000450169 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
LSM5-208ENST00000450169 COL7A1Q02388 2944 aa4.98□□□□□ -1.61
LSM5-208ENST00000450169 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
LSM5-208ENST00000450169 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
LSM5-208ENST00000450169 STAB2Q8WWQ8 2551 aa4.96□□□□□ -1.61
LSM5-208ENST00000450169 P0C880 135 aa4.96□□□□□ -1.62
LSM5-208ENST00000450169 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
LSM5-208ENST00000450169 C14orf177Q52M58 125 aa4.94□□□□□ -1.62
LSM5-208ENST00000450169 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
LSM5-208ENST00000450169 LY6G6CO95867 125 aa4.94□□□□□ -1.62
LSM5-208ENST00000450169 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
LSM5-208ENST00000450169 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
LSM5-208ENST00000450169 H0YAA0 97 aa4.93□□□□□ -1.62
LSM5-208ENST00000450169 PANO1I0J062 215 aa4.93□□□□□ -1.62
LSM5-208ENST00000450169 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
LSM5-208ENST00000450169 DNAH7Q8WXX0 4024 aa4.92□□□□□ -1.62
LSM5-208ENST00000450169 XP32Q5T750 250 aa4.92□□□□□ -1.62
LSM5-208ENST00000450169 SPINK1P00995 79 aa4.91□□□□□ -1.62
LSM5-208ENST00000450169 Q6ZSA8 131 aa4.91□□□□□ -1.62
LSM5-208ENST00000450169 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.62
LSM5-208ENST00000450169 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
LSM5-208ENST00000450169 DYNC2H1Q8NCM8 4307 aaKnown RBP4.9□□□□□ -1.63
LSM5-208ENST00000450169 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
LSM5-208ENST00000450169 CIRBP-AS1Q8TBR5 109 aa4.88□□□□□ -1.63
LSM5-208ENST00000450169 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
LSM5-208ENST00000450169 SPACA4Q8TDM5 124 aa4.86□□□□□ -1.63
LSM5-208ENST00000450169 STARD9Q9P2P6 4700 aa4.85□□□□□ -1.63
LSM5-208ENST00000450169 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
LSM5-208ENST00000450169 PSORS1C2Q9UIG4 136 aa4.85□□□□□ -1.63
LSM5-208ENST00000450169 SSBP3-AS1Q7Z2R9 100 aa4.84□□□□□ -1.63
LSM5-208ENST00000450169 A0A1B0GU33 70 aa4.84□□□□□ -1.64
LSM5-208ENST00000450169 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
LSM5-208ENST00000450169 TYMSOSQ8TAI1 123 aa4.82□□□□□ -1.64
LSM5-208ENST00000450169 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
LSM5-208ENST00000450169 K7ERS5 55 aa4.81□□□□□ -1.64
LSM5-208ENST00000450169 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
LSM5-208ENST00000450169 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
LSM5-208ENST00000450169 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
LSM5-208ENST00000450169 FRAS1Q86XX4 4008 aa4.79□□□□□ -1.64
LSM5-208ENST00000450169 VPS13DQ5THJ4 4388 aa4.79□□□□□ -1.64
LSM5-208ENST00000450169 A0A087WTM6 91 aa4.78□□□□□ -1.64
LSM5-208ENST00000450169 KMT2AQ03164 3969 aa4.78□□□□□ -1.64
LSM5-208ENST00000450169 DNAH8Q96JB1 4490 aa4.78□□□□□ -1.64
LSM5-208ENST00000450169 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
LSM5-208ENST00000450169 NUPR2A6NF83 97 aa4.77□□□□□ -1.65
LSM5-208ENST00000450169 DNAH2Q9P225 4427 aa4.77□□□□□ -1.65
LSM5-208ENST00000450169 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
LSM5-208ENST00000450169 Q6ZRN7 208 aaPredicted RBP4.73□□□□□ -1.65
LSM5-208ENST00000450169 APLNQ9ULZ1 77 aa4.72□□□□□ -1.65
LSM5-208ENST00000450169 FBN3Q75N90 2809 aa4.72□□□□□ -1.65
LSM5-208ENST00000450169 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
LSM5-208ENST00000450169 TGP01266 2768 aa4.72□□□□□ -1.65
LSM5-208ENST00000450169 NBDYA0A0U1RRE5 68 aa4.71□□□□□ -1.65
LSM5-208ENST00000450169 LCE4AQ5TA78 99 aa4.71□□□□□ -1.65
LSM5-208ENST00000450169 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
LSM5-208ENST00000450169 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
LSM5-208ENST00000450169 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
LSM5-208ENST00000450169 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
LSM5-208ENST00000450169 TPRXLQ17RH7 258 aa4.7□□□□□ -1.66
LSM5-208ENST00000450169 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
LSM5-208ENST00000450169 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
LSM5-208ENST00000450169 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
LSM5-208ENST00000450169 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
LSM5-208ENST00000450169 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms