RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
SYNGAP1-204ENST00000449372 LINC00472Q9H8W2 130 aa8.24□□□□□ -1.09
SYNGAP1-204ENST00000449372 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
SYNGAP1-204ENST00000449372 C1orf134Q5TEV5 83 aa8.22□□□□□ -1.09
SYNGAP1-204ENST00000449372 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
SYNGAP1-204ENST00000449372 DNAH2Q9P225 4427 aa8.2□□□□□ -1.1
SYNGAP1-204ENST00000449372 A0A087X002 238 aa8.2□□□□□ -1.1
SYNGAP1-204ENST00000449372 Q6ZR54 194 aa8.18□□□□□ -1.1
SYNGAP1-204ENST00000449372 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
SYNGAP1-204ENST00000449372 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
SYNGAP1-204ENST00000449372 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
SYNGAP1-204ENST00000449372 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
SYNGAP1-204ENST00000449372 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.11
SYNGAP1-204ENST00000449372 NUPR2A6NF83 97 aa8.13□□□□□ -1.11
SYNGAP1-204ENST00000449372 IGLV9-49A0A0B4J1Y8 123 aa8.13□□□□□ -1.11
SYNGAP1-204ENST00000449372 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SYNGAP1-204ENST00000449372 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
SYNGAP1-204ENST00000449372 MRPL34Q9BQ48 92 aaKnown RBP8.11□□□□□ -1.11
SYNGAP1-204ENST00000449372 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
SYNGAP1-204ENST00000449372 DNAH6Q9C0G6 4158 aa8.11□□□□□ -1.11
SYNGAP1-204ENST00000449372 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
SYNGAP1-204ENST00000449372 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
SYNGAP1-204ENST00000449372 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
SYNGAP1-204ENST00000449372 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
SYNGAP1-204ENST00000449372 ACYP2P14621 99 aa8.09□□□□□ -1.11
SYNGAP1-204ENST00000449372 FBN3Q75N90 2809 aa8.07□□□□□ -1.12
SYNGAP1-204ENST00000449372 UQCR11O14957 56 aa8.06□□□□□ -1.12
SYNGAP1-204ENST00000449372 FRAS1Q86XX4 4008 aa8.05□□□□□ -1.12
SYNGAP1-204ENST00000449372 DNAH8Q96JB1 4490 aa8.04□□□□□ -1.12
SYNGAP1-204ENST00000449372 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
SYNGAP1-204ENST00000449372 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
SYNGAP1-204ENST00000449372 SRRM2Q9UQ35 2752 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-204ENST00000449372 ROMO1P60602 79 aa8.02□□□□□ -1.12
SYNGAP1-204ENST00000449372 A0A0A0MQY5 61 aa8.01□□□□□ -1.13
SYNGAP1-204ENST00000449372 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SYNGAP1-204ENST00000449372 Q96NJ1 140 aa8□□□□□ -1.13
SYNGAP1-204ENST00000449372 PANO1I0J062 215 aa7.99□□□□□ -1.13
SYNGAP1-204ENST00000449372 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
SYNGAP1-204ENST00000449372 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
SYNGAP1-204ENST00000449372 ZNF861PO60384 105 aa7.97□□□□□ -1.13
SYNGAP1-204ENST00000449372 DNAH5Q8TE73 4624 aa7.96□□□□□ -1.14
SYNGAP1-204ENST00000449372 ALMS1Q8TCU4 4167 aa7.96□□□□□ -1.14
SYNGAP1-204ENST00000449372 A0A087WTM6 91 aa7.95□□□□□ -1.14
SYNGAP1-204ENST00000449372 SSBP3-AS1Q7Z2R9 100 aa7.95□□□□□ -1.14
SYNGAP1-204ENST00000449372 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
SYNGAP1-204ENST00000449372 Q5W150 140 aa7.94□□□□□ -1.14
SYNGAP1-204ENST00000449372 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
SYNGAP1-204ENST00000449372 PKD1P98161 4303 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 IGLV5-52A0A0A0MRZ9 124 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
SYNGAP1-204ENST00000449372 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
SYNGAP1-204ENST00000449372 WWC2-AS2Q96NR7 200 aa7.92□□□□□ -1.14
SYNGAP1-204ENST00000449372 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
SYNGAP1-204ENST00000449372 PSORS1C2Q9UIG4 136 aa7.89□□□□□ -1.15
SYNGAP1-204ENST00000449372 CIRBP-AS1Q8TBR5 109 aa7.88□□□□□ -1.15
SYNGAP1-204ENST00000449372 TGP01266 2768 aa7.87□□□□□ -1.15
SYNGAP1-204ENST00000449372 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
SYNGAP1-204ENST00000449372 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
SYNGAP1-204ENST00000449372 IGLV7-43P04211 117 aa7.83□□□□□ -1.16
SYNGAP1-204ENST00000449372 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
SYNGAP1-204ENST00000449372 LY6G6CO95867 125 aa7.76□□□□□ -1.17
SYNGAP1-204ENST00000449372 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
SYNGAP1-204ENST00000449372 P0C880 135 aa7.75□□□□□ -1.17
SYNGAP1-204ENST00000449372 A8MUU9 505 aa7.73□□□□□ -1.17
SYNGAP1-204ENST00000449372 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
SYNGAP1-204ENST00000449372 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
SYNGAP1-204ENST00000449372 KRTAP10-2P60368 255 aa7.72□□□□□ -1.17
SYNGAP1-204ENST00000449372 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.17
SYNGAP1-204ENST00000449372 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.17
SYNGAP1-204ENST00000449372 KRTAP16-1A8MUX0 517 aa7.7□□□□□ -1.18
SYNGAP1-204ENST00000449372 FLG2Q5D862 2391 aaPredicted RBP7.69□□□□□ -1.18
SYNGAP1-204ENST00000449372 Q6ZSA8 131 aa7.69□□□□□ -1.18
SYNGAP1-204ENST00000449372 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
SYNGAP1-204ENST00000449372 PKHD1P08F94 4074 aa7.66□□□□□ -1.18
SYNGAP1-204ENST00000449372 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.18
SYNGAP1-204ENST00000449372 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
SYNGAP1-204ENST00000449372 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
SYNGAP1-204ENST00000449372 SPINK1P00995 79 aa7.64□□□□□ -1.19
SYNGAP1-204ENST00000449372 H0YAA0 97 aa7.62□□□□□ -1.19
SYNGAP1-204ENST00000449372 KRTAP10-1P60331 282 aa7.62□□□□□ -1.19
SYNGAP1-204ENST00000449372 K7ERS5 55 aa7.58□□□□□ -1.2
SYNGAP1-204ENST00000449372 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
SYNGAP1-204ENST00000449372 RYR2Q92736 4967 aa7.55□□□□□ -1.2
SYNGAP1-204ENST00000449372 DYNC1H1Q14204 4646 aaKnown RBP7.54□□□□□ -1.2
SYNGAP1-204ENST00000449372 TYMSOSQ8TAI1 123 aa7.53□□□□□ -1.2
SYNGAP1-204ENST00000449372 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-204ENST00000449372 A0A1B0GU33 70 aa7.49□□□□□ -1.21
SYNGAP1-204ENST00000449372 KMT2CQ8NEZ4 4911 aaKnown RBP7.48□□□□□ -1.21
SYNGAP1-204ENST00000449372 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
SYNGAP1-204ENST00000449372 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
SYNGAP1-204ENST00000449372 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.21
SYNGAP1-204ENST00000449372 Q8N1X5 172 aa7.46□□□□□ -1.22
SYNGAP1-204ENST00000449372 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
SYNGAP1-204ENST00000449372 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
SYNGAP1-204ENST00000449372 PKHD1L1Q86WI1 4243 aa7.42□□□□□ -1.22
SYNGAP1-204ENST00000449372 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
SYNGAP1-204ENST00000449372 FAT1Q14517 4588 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms