RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PANO1I0J062 215 aa5.51□□□□□ -1.53
SYNPO2-204ENST00000448416 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-204ENST00000448416 FAM229AH3BQW9 127 aa5.49□□□□□ -1.53
SYNPO2-204ENST00000448416 HECTD1Q9ULT8 2610 aa5.49□□□□□ -1.53
SYNPO2-204ENST00000448416 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
SYNPO2-204ENST00000448416 MAST4O15021 2626 aa5.49□□□□□ -1.53
SYNPO2-204ENST00000448416 TENM4Q6N022 2769 aa5.48□□□□□ -1.53
SYNPO2-204ENST00000448416 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
SYNPO2-204ENST00000448416 NSD1Q96L73 2696 aaPredicted RBP5.47□□□□□ -1.53
SYNPO2-204ENST00000448416 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
SYNPO2-204ENST00000448416 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.53
SYNPO2-204ENST00000448416 ANK2Q01484 3957 aa5.46□□□□□ -1.54
SYNPO2-204ENST00000448416 ROMO1P60602 79 aa5.45□□□□□ -1.54
SYNPO2-204ENST00000448416 NBEAL1Q6ZS30 2694 aa5.45□□□□□ -1.54
SYNPO2-204ENST00000448416 CIRBP-AS1Q8TBR5 109 aa5.45□□□□□ -1.54
SYNPO2-204ENST00000448416 COL6A5A8TX70 2615 aa5.45□□□□□ -1.54
SYNPO2-204ENST00000448416 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
SYNPO2-204ENST00000448416 SPINK1P00995 79 aa5.43□□□□□ -1.54
SYNPO2-204ENST00000448416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.43□□□□□ -1.54
SYNPO2-204ENST00000448416 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
SYNPO2-204ENST00000448416 NOTCH1P46531 2555 aa5.42□□□□□ -1.54
SYNPO2-204ENST00000448416 PSORS1C2Q9UIG4 136 aa5.42□□□□□ -1.54
SYNPO2-204ENST00000448416 SPACA4Q8TDM5 124 aa5.4□□□□□ -1.54
SYNPO2-204ENST00000448416 LYSTQ99698 3801 aa5.39□□□□□ -1.55
SYNPO2-204ENST00000448416 A8MUU9 505 aa5.39□□□□□ -1.55
SYNPO2-204ENST00000448416 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
SYNPO2-204ENST00000448416 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
SYNPO2-204ENST00000448416 KMT2BQ9UMN6 2715 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-204ENST00000448416 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
SYNPO2-204ENST00000448416 LY6G6CO95867 125 aa5.37□□□□□ -1.55
SYNPO2-204ENST00000448416 H0YAA0 97 aa5.35□□□□□ -1.55
SYNPO2-204ENST00000448416 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
SYNPO2-204ENST00000448416 Q6ZSA8 131 aa5.34□□□□□ -1.55
SYNPO2-204ENST00000448416 STAB1Q9NY15 2570 aa5.34□□□□□ -1.55
SYNPO2-204ENST00000448416 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
SYNPO2-204ENST00000448416 Q8N1X5 172 aa5.32□□□□□ -1.56
SYNPO2-204ENST00000448416 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
SYNPO2-204ENST00000448416 APLNQ9ULZ1 77 aa5.32□□□□□ -1.56
SYNPO2-204ENST00000448416 NBDYA0A0U1RRE5 68 aa5.31□□□□□ -1.56
SYNPO2-204ENST00000448416 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
SYNPO2-204ENST00000448416 Q6ZRN7 208 aaPredicted RBP5.29□□□□□ -1.56
SYNPO2-204ENST00000448416 MEGF8Q7Z7M0 2845 aa5.29□□□□□ -1.56
SYNPO2-204ENST00000448416 A0A1B0GU33 70 aa5.29□□□□□ -1.56
SYNPO2-204ENST00000448416 P0C880 135 aa5.29□□□□□ -1.56
SYNPO2-204ENST00000448416 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
SYNPO2-204ENST00000448416 FRAS1Q86XX4 4008 aa5.28□□□□□ -1.56
SYNPO2-204ENST00000448416 TGP01266 2768 aa5.27□□□□□ -1.57
SYNPO2-204ENST00000448416 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
SYNPO2-204ENST00000448416 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
SYNPO2-204ENST00000448416 HUWE1Q7Z6Z7 4374 aaKnown RBP5.27□□□□□ -1.57
SYNPO2-204ENST00000448416 TYMSOSQ8TAI1 123 aa5.27□□□□□ -1.57
SYNPO2-204ENST00000448416 J3QKU1 62 aa5.26□□□□□ -1.57
SYNPO2-204ENST00000448416 K7ERS5 55 aa5.26□□□□□ -1.57
SYNPO2-204ENST00000448416 A0A087WTM6 91 aa5.25□□□□□ -1.57
SYNPO2-204ENST00000448416 KRTAP24-1Q3LI83 254 aa5.24□□□□□ -1.57
SYNPO2-204ENST00000448416 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
SYNPO2-204ENST00000448416 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
SYNPO2-204ENST00000448416 DNAH3Q8TD57 4116 aa5.21□□□□□ -1.57
SYNPO2-204ENST00000448416 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
SYNPO2-204ENST00000448416 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
SYNPO2-204ENST00000448416 KRTAP13-2Q52LG2 175 aa5.18□□□□□ -1.58
SYNPO2-204ENST00000448416 DNAH17Q9UFH2 4485 aa5.16□□□□□ -1.58
SYNPO2-204ENST00000448416 MGAM2Q2M2H8 2515 aa5.14□□□□□ -1.59
SYNPO2-204ENST00000448416 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
SYNPO2-204ENST00000448416 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
SYNPO2-204ENST00000448416 NUPR2A6NF83 97 aa5.12□□□□□ -1.59
SYNPO2-204ENST00000448416 COX6B2Q6YFQ2 88 aa5.12□□□□□ -1.59
SYNPO2-204ENST00000448416 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
SYNPO2-204ENST00000448416 FBN3Q75N90 2809 aa5.1□□□□□ -1.59
SYNPO2-204ENST00000448416 C20orf166-AS1Q96NR2 134 aa5.09□□□□□ -1.59
SYNPO2-204ENST00000448416 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
SYNPO2-204ENST00000448416 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
SYNPO2-204ENST00000448416 RPL37P61927 97 aaKnown RBP5.07□□□□□ -1.6
SYNPO2-204ENST00000448416 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
SYNPO2-204ENST00000448416 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
SYNPO2-204ENST00000448416 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
SYNPO2-204ENST00000448416 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
SYNPO2-204ENST00000448416 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
SYNPO2-204ENST00000448416 A0A0D9SG42 100 aa5.03□□□□□ -1.6
SYNPO2-204ENST00000448416 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
SYNPO2-204ENST00000448416 C9orf92A6NGG3 77 aa5□□□□□ -1.61
SYNPO2-204ENST00000448416 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
SYNPO2-204ENST00000448416 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
SYNPO2-204ENST00000448416 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
SYNPO2-204ENST00000448416 DNAH11Q96DT5 4516 aa4.96□□□□□ -1.62
SYNPO2-204ENST00000448416 KRTAP10-2P60368 255 aa4.96□□□□□ -1.62
SYNPO2-204ENST00000448416 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
SYNPO2-204ENST00000448416 STARD9Q9P2P6 4700 aa4.95□□□□□ -1.62
SYNPO2-204ENST00000448416 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
SYNPO2-204ENST00000448416 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
SYNPO2-204ENST00000448416 KRTAP10-1P60331 282 aa4.9□□□□□ -1.63
SYNPO2-204ENST00000448416 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
SYNPO2-204ENST00000448416 LRP1BQ9NZR2 4599 aa4.89□□□□□ -1.63
SYNPO2-204ENST00000448416 S4R3F8 94 aa4.88□□□□□ -1.63
SYNPO2-204ENST00000448416 J3QL48 77 aa4.86□□□□□ -1.63
SYNPO2-204ENST00000448416 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
SYNPO2-204ENST00000448416 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
SYNPO2-204ENST00000448416 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
SYNPO2-204ENST00000448416 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
SYNPO2-204ENST00000448416 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms