RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
TOP3B-210ENST00000444502 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
TOP3B-210ENST00000444502 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
TOP3B-210ENST00000444502 LCE6AA0A183 80 aa6.51□□□□□ -1.37
TOP3B-210ENST00000444502 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
TOP3B-210ENST00000444502 A8MWP4 228 aa6.51□□□□□ -1.37
TOP3B-210ENST00000444502 KRTAP10-1P60331 282 aa6.5□□□□□ -1.37
TOP3B-210ENST00000444502 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
TOP3B-210ENST00000444502 PRR26Q8N8Z3 221 aa6.5□□□□□ -1.37
TOP3B-210ENST00000444502 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
TOP3B-210ENST00000444502 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
TOP3B-210ENST00000444502 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
TOP3B-210ENST00000444502 H3BPC8 53 aa6.47□□□□□ -1.37
TOP3B-210ENST00000444502 Q6ZR54 194 aa6.46□□□□□ -1.37
TOP3B-210ENST00000444502 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.37
TOP3B-210ENST00000444502 A0A1B0GU69 56 aa6.46□□□□□ -1.38
TOP3B-210ENST00000444502 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
TOP3B-210ENST00000444502 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
TOP3B-210ENST00000444502 C8orf17Q9NRJ1 99 aa6.42□□□□□ -1.38
TOP3B-210ENST00000444502 MRPL34Q9BQ48 92 aaKnown RBP6.41□□□□□ -1.38
TOP3B-210ENST00000444502 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
TOP3B-210ENST00000444502 A0A1B0GVX0 72 aa6.4□□□□□ -1.39
TOP3B-210ENST00000444502 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
TOP3B-210ENST00000444502 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
TOP3B-210ENST00000444502 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
TOP3B-210ENST00000444502 SPRR1BP22528 89 aa6.37□□□□□ -1.39
TOP3B-210ENST00000444502 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
TOP3B-210ENST00000444502 HRES1P13985 223 aa6.36□□□□□ -1.39
TOP3B-210ENST00000444502 Q5VSD8 79 aa6.35□□□□□ -1.39
TOP3B-210ENST00000444502 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
TOP3B-210ENST00000444502 ACYP2P14621 99 aa6.33□□□□□ -1.4
TOP3B-210ENST00000444502 UQCR11O14957 56 aa6.32□□□□□ -1.4
TOP3B-210ENST00000444502 MMP24-AS1A0A0U1RRL7 71 aa6.31□□□□□ -1.4
TOP3B-210ENST00000444502 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
TOP3B-210ENST00000444502 A0A087X002 238 aa6.27□□□□□ -1.41
TOP3B-210ENST00000444502 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
TOP3B-210ENST00000444502 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
TOP3B-210ENST00000444502 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
TOP3B-210ENST00000444502 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
TOP3B-210ENST00000444502 Q8N1X5 172 aa6.22□□□□□ -1.41
TOP3B-210ENST00000444502 NOTCH2NLQ7Z3S9 236 aa6.21□□□□□ -1.41
TOP3B-210ENST00000444502 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.41
TOP3B-210ENST00000444502 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
TOP3B-210ENST00000444502 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
TOP3B-210ENST00000444502 CSMD3Q7Z407 3707 aa6.16□□□□□ -1.42
TOP3B-210ENST00000444502 Q6ZSA8 131 aa6.14□□□□□ -1.43
TOP3B-210ENST00000444502 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
TOP3B-210ENST00000444502 Q5W150 140 aa6.1□□□□□ -1.43
TOP3B-210ENST00000444502 ROMO1P60602 79 aa6.08□□□□□ -1.44
TOP3B-210ENST00000444502 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
TOP3B-210ENST00000444502 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
TOP3B-210ENST00000444502 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
TOP3B-210ENST00000444502 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
TOP3B-210ENST00000444502 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
TOP3B-210ENST00000444502 M0R2T5 61 aa5.99□□□□□ -1.45
TOP3B-210ENST00000444502 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
TOP3B-210ENST00000444502 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
TOP3B-210ENST00000444502 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
TOP3B-210ENST00000444502 A0A0D9SG42 100 aa5.94□□□□□ -1.46
TOP3B-210ENST00000444502 A8MUU9 505 aa5.93□□□□□ -1.46
TOP3B-210ENST00000444502 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
TOP3B-210ENST00000444502 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
TOP3B-210ENST00000444502 A0A1B0GU33 70 aa5.9□□□□□ -1.47
TOP3B-210ENST00000444502 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
TOP3B-210ENST00000444502 DNAH9Q9NYC9 4486 aa5.89□□□□□ -1.47
TOP3B-210ENST00000444502 ANK2Q01484 3957 aa5.88□□□□□ -1.47
TOP3B-210ENST00000444502 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
TOP3B-210ENST00000444502 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
TOP3B-210ENST00000444502 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
TOP3B-210ENST00000444502 S4R3F8 94 aa5.81□□□□□ -1.48
TOP3B-210ENST00000444502 P0C880 135 aa5.79□□□□□ -1.48
TOP3B-210ENST00000444502 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
TOP3B-210ENST00000444502 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
TOP3B-210ENST00000444502 LYSTQ99698 3801 aa5.78□□□□□ -1.48
TOP3B-210ENST00000444502 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
TOP3B-210ENST00000444502 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
TOP3B-210ENST00000444502 H0YAA0 97 aa5.75□□□□□ -1.49
TOP3B-210ENST00000444502 STARD9Q9P2P6 4700 aa5.72□□□□□ -1.49
TOP3B-210ENST00000444502 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
TOP3B-210ENST00000444502 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
TOP3B-210ENST00000444502 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.49
TOP3B-210ENST00000444502 RPL37P61927 97 aaKnown RBP5.7□□□□□ -1.5
TOP3B-210ENST00000444502 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
TOP3B-210ENST00000444502 R4GN34 69 aa5.7□□□□□ -1.5
TOP3B-210ENST00000444502 CMYA5Q8N3K9 4069 aa5.7□□□□□ -1.5
TOP3B-210ENST00000444502 PRKDCP78527 4128 aaKnown RBP5.69□□□□□ -1.5
TOP3B-210ENST00000444502 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
TOP3B-210ENST00000444502 DNAH11Q96DT5 4516 aa5.69□□□□□ -1.5
TOP3B-210ENST00000444502 XP32Q5T750 250 aa5.66□□□□□ -1.5
TOP3B-210ENST00000444502 DNAH3Q8TD57 4116 aa5.65□□□□□ -1.5
TOP3B-210ENST00000444502 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
TOP3B-210ENST00000444502 M0QZ58 72 aa5.62□□□□□ -1.51
TOP3B-210ENST00000444502 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
TOP3B-210ENST00000444502 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
TOP3B-210ENST00000444502 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
TOP3B-210ENST00000444502 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
TOP3B-210ENST00000444502 DNAH17Q9UFH2 4485 aa5.55□□□□□ -1.52
TOP3B-210ENST00000444502 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
TOP3B-210ENST00000444502 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
TOP3B-210ENST00000444502 LRP1BQ9NZR2 4599 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms