RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 RTL8CO15255 209 aa5.42□□□□□ -1.54
COPB1-202ENST00000439561 Q5W150 140 aa5.42□□□□□ -1.54
COPB1-202ENST00000439561 IGLV5-52A0A0A0MRZ9 124 aa5.4□□□□□ -1.54
COPB1-202ENST00000439561 ZNF861PO60384 105 aa5.4□□□□□ -1.54
COPB1-202ENST00000439561 LINC00313P59037 77 aa5.4□□□□□ -1.54
COPB1-202ENST00000439561 WWC2-AS2Q96NR7 200 aa5.4□□□□□ -1.54
COPB1-202ENST00000439561 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
COPB1-202ENST00000439561 A0A087WTM6 91 aa5.38□□□□□ -1.55
COPB1-202ENST00000439561 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
COPB1-202ENST00000439561 NUPR2A6NF83 97 aa5.37□□□□□ -1.55
COPB1-202ENST00000439561 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
COPB1-202ENST00000439561 C8orf87E5RJ46 101 aa5.36□□□□□ -1.55
COPB1-202ENST00000439561 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
COPB1-202ENST00000439561 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
COPB1-202ENST00000439561 UQCR11O14957 56 aa5.34□□□□□ -1.55
COPB1-202ENST00000439561 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
COPB1-202ENST00000439561 LY6G6CO95867 125 aa5.33□□□□□ -1.56
COPB1-202ENST00000439561 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
COPB1-202ENST00000439561 IGLV7-43P04211 117 aa5.32□□□□□ -1.56
COPB1-202ENST00000439561 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
COPB1-202ENST00000439561 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
COPB1-202ENST00000439561 C1orf134Q5TEV5 83 aa5.29□□□□□ -1.56
COPB1-202ENST00000439561 Q8N1X5 172 aa5.29□□□□□ -1.56
COPB1-202ENST00000439561 TGP01266 2768 aa5.29□□□□□ -1.56
COPB1-202ENST00000439561 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
COPB1-202ENST00000439561 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
COPB1-202ENST00000439561 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
COPB1-202ENST00000439561 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
COPB1-202ENST00000439561 ANK2Q01484 3957 aa5.27□□□□□ -1.57
COPB1-202ENST00000439561 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
COPB1-202ENST00000439561 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
COPB1-202ENST00000439561 FLG2Q5D862 2391 aaPredicted RBP5.23□□□□□ -1.57
COPB1-202ENST00000439561 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
COPB1-202ENST00000439561 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
COPB1-202ENST00000439561 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
COPB1-202ENST00000439561 TYMSOSQ8TAI1 123 aa5.19□□□□□ -1.58
COPB1-202ENST00000439561 LYSTQ99698 3801 aa5.18□□□□□ -1.58
COPB1-202ENST00000439561 DMBT1Q9UGM3 2413 aaPredicted RBP5.18□□□□□ -1.58
COPB1-202ENST00000439561 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
COPB1-202ENST00000439561 H3BS24 57 aa5.16□□□□□ -1.58
COPB1-202ENST00000439561 C9orf92A6NGG3 77 aa5.15□□□□□ -1.58
COPB1-202ENST00000439561 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.58
COPB1-202ENST00000439561 KRTAP10-2P60368 255 aa5.15□□□□□ -1.59
COPB1-202ENST00000439561 KRTAP13-2Q52LG2 175 aa5.14□□□□□ -1.59
COPB1-202ENST00000439561 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
COPB1-202ENST00000439561 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
COPB1-202ENST00000439561 K7ERS5 55 aa5.12□□□□□ -1.59
COPB1-202ENST00000439561 DNAH9Q9NYC9 4486 aa5.09□□□□□ -1.6
COPB1-202ENST00000439561 A0A1B0GU33 70 aa5.08□□□□□ -1.6
COPB1-202ENST00000439561 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
COPB1-202ENST00000439561 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
COPB1-202ENST00000439561 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
COPB1-202ENST00000439561 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
COPB1-202ENST00000439561 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
COPB1-202ENST00000439561 A0A0D9SG42 100 aa5.02□□□□□ -1.61
COPB1-202ENST00000439561 Q6ZSA8 131 aa5.01□□□□□ -1.61
COPB1-202ENST00000439561 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
COPB1-202ENST00000439561 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
COPB1-202ENST00000439561 H0YAA0 97 aa4.99□□□□□ -1.61
COPB1-202ENST00000439561 DNAH7Q8WXX0 4024 aa4.99□□□□□ -1.61
COPB1-202ENST00000439561 KRTAP21-3Q3LHN1 58 aa4.99□□□□□ -1.61
COPB1-202ENST00000439561 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
COPB1-202ENST00000439561 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
COPB1-202ENST00000439561 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
COPB1-202ENST00000439561 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.61
COPB1-202ENST00000439561 CMYA5Q8N3K9 4069 aa4.96□□□□□ -1.61
COPB1-202ENST00000439561 A8MUU9 505 aa4.94□□□□□ -1.62
COPB1-202ENST00000439561 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
COPB1-202ENST00000439561 DNAH3Q8TD57 4116 aa4.91□□□□□ -1.62
COPB1-202ENST00000439561 ROMO1P60602 79 aa4.9□□□□□ -1.62
COPB1-202ENST00000439561 STARD9Q9P2P6 4700 aa4.89□□□□□ -1.63
COPB1-202ENST00000439561 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
COPB1-202ENST00000439561 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
COPB1-202ENST00000439561 DNAH17Q9UFH2 4485 aa4.84□□□□□ -1.63
COPB1-202ENST00000439561 RPL37P61927 97 aaKnown RBP4.84□□□□□ -1.63
COPB1-202ENST00000439561 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.64
COPB1-202ENST00000439561 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
COPB1-202ENST00000439561 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
COPB1-202ENST00000439561 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
COPB1-202ENST00000439561 HECTD4Q9Y4D8 3996 aa4.81□□□□□ -1.64
COPB1-202ENST00000439561 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
COPB1-202ENST00000439561 VPS13DQ5THJ4 4388 aa4.78□□□□□ -1.64
COPB1-202ENST00000439561 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.65
COPB1-202ENST00000439561 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
COPB1-202ENST00000439561 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
COPB1-202ENST00000439561 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
COPB1-202ENST00000439561 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
COPB1-202ENST00000439561 S4R3F8 94 aa4.75□□□□□ -1.65
COPB1-202ENST00000439561 NDUFAF8A1L188 74 aa4.71□□□□□ -1.65
COPB1-202ENST00000439561 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
COPB1-202ENST00000439561 P0C880 135 aa4.7□□□□□ -1.66
COPB1-202ENST00000439561 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
COPB1-202ENST00000439561 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
COPB1-202ENST00000439561 DYNC2H1Q8NCM8 4307 aaKnown RBP4.67□□□□□ -1.66
COPB1-202ENST00000439561 VPS13BQ7Z7G8 4022 aa4.67□□□□□ -1.66
COPB1-202ENST00000439561 DNAH5Q8TE73 4624 aa4.66□□□□□ -1.66
COPB1-202ENST00000439561 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
COPB1-202ENST00000439561 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
COPB1-202ENST00000439561 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
COPB1-202ENST00000439561 FAT1Q14517 4588 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms