RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 ATRQ13535 2644 aa4.4□□□□□ -1.7
PTPN20-210ENST00000437863 A8MUU9 505 aa4.4□□□□□ -1.71
PTPN20-210ENST00000437863 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
PTPN20-210ENST00000437863 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
PTPN20-210ENST00000437863 COL7A1Q02388 2944 aa4.39□□□□□ -1.71
PTPN20-210ENST00000437863 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
PTPN20-210ENST00000437863 Q5W150 140 aa4.37□□□□□ -1.71
PTPN20-210ENST00000437863 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
PTPN20-210ENST00000437863 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
PTPN20-210ENST00000437863 LINC00483Q53H64 154 aa4.36□□□□□ -1.71
PTPN20-210ENST00000437863 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
PTPN20-210ENST00000437863 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
PTPN20-210ENST00000437863 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
PTPN20-210ENST00000437863 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
PTPN20-210ENST00000437863 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.71
PTPN20-210ENST00000437863 NBEAL1Q6ZS30 2694 aa4.34□□□□□ -1.71
PTPN20-210ENST00000437863 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
PTPN20-210ENST00000437863 CDK2AP2O75956 126 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 LINC00304Q8N9R0 145 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 Q96NJ1 140 aa4.32□□□□□ -1.72
PTPN20-210ENST00000437863 IGLV9-49A0A0B4J1Y8 123 aa4.31□□□□□ -1.72
PTPN20-210ENST00000437863 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
PTPN20-210ENST00000437863 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
PTPN20-210ENST00000437863 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
PTPN20-210ENST00000437863 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
PTPN20-210ENST00000437863 SPINK1P00995 79 aa4.3□□□□□ -1.72
PTPN20-210ENST00000437863 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
PTPN20-210ENST00000437863 STAB1Q9NY15 2570 aa4.29□□□□□ -1.72
PTPN20-210ENST00000437863 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
PTPN20-210ENST00000437863 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
PTPN20-210ENST00000437863 FLNBO75369 2602 aaKnown RBP4.28□□□□□ -1.72
PTPN20-210ENST00000437863 UBE2DNLQ8IWF7 75 aa4.28□□□□□ -1.72
PTPN20-210ENST00000437863 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
PTPN20-210ENST00000437863 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
PTPN20-210ENST00000437863 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
PTPN20-210ENST00000437863 H0YAA0 97 aa4.25□□□□□ -1.73
PTPN20-210ENST00000437863 KRTAP13-3Q3SY46 172 aa4.25□□□□□ -1.73
PTPN20-210ENST00000437863 WWC2-AS2Q96NR7 200 aa4.25□□□□□ -1.73
PTPN20-210ENST00000437863 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
PTPN20-210ENST00000437863 PLECQ15149 4684 aaKnown RBP4.24□□□□□ -1.73
PTPN20-210ENST00000437863 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
PTPN20-210ENST00000437863 NOTCH1P46531 2555 aa4.23□□□□□ -1.73
PTPN20-210ENST00000437863 SPRR1BP22528 89 aa4.23□□□□□ -1.73
PTPN20-210ENST00000437863 COL6A5A8TX70 2615 aa4.23□□□□□ -1.73
PTPN20-210ENST00000437863 DMBT1Q9UGM3 2413 aaPredicted RBP4.23□□□□□ -1.73
PTPN20-210ENST00000437863 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
PTPN20-210ENST00000437863 A0A087WTM6 91 aa4.21□□□□□ -1.73
PTPN20-210ENST00000437863 CHTF8P0CG12 524 aa4.21□□□□□ -1.73
PTPN20-210ENST00000437863 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.73
PTPN20-210ENST00000437863 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
PTPN20-210ENST00000437863 Q6ZSA8 131 aa4.21□□□□□ -1.74
PTPN20-210ENST00000437863 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
PTPN20-210ENST00000437863 MEGF8Q7Z7M0 2845 aa4.21□□□□□ -1.74
PTPN20-210ENST00000437863 KRTAP13-1Q8IUC0 172 aa4.2□□□□□ -1.74
PTPN20-210ENST00000437863 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
PTPN20-210ENST00000437863 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
PTPN20-210ENST00000437863 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
PTPN20-210ENST00000437863 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
PTPN20-210ENST00000437863 LY6G6CO95867 125 aa4.17□□□□□ -1.74
PTPN20-210ENST00000437863 PANO1I0J062 215 aa4.17□□□□□ -1.74
PTPN20-210ENST00000437863 LYSTQ99698 3801 aa4.17□□□□□ -1.74
PTPN20-210ENST00000437863 HECTD4Q9Y4D8 3996 aa4.16□□□□□ -1.74
PTPN20-210ENST00000437863 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
PTPN20-210ENST00000437863 Q8N1X5 172 aa4.15□□□□□ -1.75
PTPN20-210ENST00000437863 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
PTPN20-210ENST00000437863 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
PTPN20-210ENST00000437863 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
PTPN20-210ENST00000437863 A0A1B0GU33 70 aa4.14□□□□□ -1.75
PTPN20-210ENST00000437863 FAM229AH3BQW9 127 aa4.14□□□□□ -1.75
PTPN20-210ENST00000437863 TGP01266 2768 aa4.13□□□□□ -1.75
PTPN20-210ENST00000437863 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
PTPN20-210ENST00000437863 K7ERS5 55 aa4.12□□□□□ -1.75
PTPN20-210ENST00000437863 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
PTPN20-210ENST00000437863 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
PTPN20-210ENST00000437863 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
PTPN20-210ENST00000437863 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
PTPN20-210ENST00000437863 PKD1P98161 4303 aa4.1□□□□□ -1.75
PTPN20-210ENST00000437863 STAB2Q8WWQ8 2551 aa4.1□□□□□ -1.75
PTPN20-210ENST00000437863 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.09□□□□□ -1.75
PTPN20-210ENST00000437863 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
PTPN20-210ENST00000437863 CIRBP-AS1Q8TBR5 109 aa4.08□□□□□ -1.76
PTPN20-210ENST00000437863 H1FX-AS1Q4G0G2 97 aa4.08□□□□□ -1.76
PTPN20-210ENST00000437863 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
PTPN20-210ENST00000437863 FBN3Q75N90 2809 aa4.06□□□□□ -1.76
PTPN20-210ENST00000437863 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
PTPN20-210ENST00000437863 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
PTPN20-210ENST00000437863 KMT2AQ03164 3969 aa4.03□□□□□ -1.76
PTPN20-210ENST00000437863 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.77
PTPN20-210ENST00000437863 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
PTPN20-210ENST00000437863 A0A0D9SG42 100 aa4.01□□□□□ -1.77
PTPN20-210ENST00000437863 RPS29P62273 56 aaKnown RBP4□□□□□ -1.77
PTPN20-210ENST00000437863 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
PTPN20-210ENST00000437863 COX6B2Q6YFQ2 88 aa3.99□□□□□ -1.77
PTPN20-210ENST00000437863 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
PTPN20-210ENST00000437863 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
PTPN20-210ENST00000437863 RPL37P61927 97 aaKnown RBP3.95□□□□□ -1.78
PTPN20-210ENST00000437863 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms