RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
CLDN4-203ENST00000435050 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
CLDN4-203ENST00000435050 LCA10Q71F78 164 aa7.22□□□□□ -1.25
CLDN4-203ENST00000435050 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
CLDN4-203ENST00000435050 LINC00313P59037 77 aa7.19□□□□□ -1.26
CLDN4-203ENST00000435050 PRR26Q8N8Z3 221 aa7.19□□□□□ -1.26
CLDN4-203ENST00000435050 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
CLDN4-203ENST00000435050 C7orf65Q6ZTY9 151 aa7.18□□□□□ -1.26
CLDN4-203ENST00000435050 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
CLDN4-203ENST00000435050 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
CLDN4-203ENST00000435050 LCE6AA0A183 80 aa7.16□□□□□ -1.26
CLDN4-203ENST00000435050 KRTAP21-3Q3LHN1 58 aa7.16□□□□□ -1.26
CLDN4-203ENST00000435050 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
CLDN4-203ENST00000435050 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
CLDN4-203ENST00000435050 IGKV2-30P06310 120 aa7.14□□□□□ -1.27
CLDN4-203ENST00000435050 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
CLDN4-203ENST00000435050 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
CLDN4-203ENST00000435050 Q96NJ1 140 aa7.12□□□□□ -1.27
CLDN4-203ENST00000435050 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
CLDN4-203ENST00000435050 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
CLDN4-203ENST00000435050 H3BPC8 53 aa7.1□□□□□ -1.27
CLDN4-203ENST00000435050 DNAH1Q9P2D7 4330 aa7.1□□□□□ -1.27
CLDN4-203ENST00000435050 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
CLDN4-203ENST00000435050 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
CLDN4-203ENST00000435050 C9orf92A6NGG3 77 aa7.09□□□□□ -1.28
CLDN4-203ENST00000435050 Q6ZSA8 131 aa7.08□□□□□ -1.28
CLDN4-203ENST00000435050 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
CLDN4-203ENST00000435050 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CLDN4-203ENST00000435050 KMT2AQ03164 3969 aa7.06□□□□□ -1.28
CLDN4-203ENST00000435050 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
CLDN4-203ENST00000435050 VPS13DQ5THJ4 4388 aa7.05□□□□□ -1.28
CLDN4-203ENST00000435050 SPINK1P00995 79 aa7.04□□□□□ -1.28
CLDN4-203ENST00000435050 ZCCHC13Q8WW36 166 aaKnown RBP7.03□□□□□ -1.28
CLDN4-203ENST00000435050 Q1T7F1 81 aa7.03□□□□□ -1.28
CLDN4-203ENST00000435050 LOC101927531A0A1B0GV80 90 aa7.02□□□□□ -1.29
CLDN4-203ENST00000435050 A8MU10 97 aa7.01□□□□□ -1.29
CLDN4-203ENST00000435050 COA5Q86WW8 74 aa7.01□□□□□ -1.29
CLDN4-203ENST00000435050 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
CLDN4-203ENST00000435050 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
CLDN4-203ENST00000435050 Q5W150 140 aa7□□□□□ -1.29
CLDN4-203ENST00000435050 K7ERS5 55 aa6.99□□□□□ -1.29
CLDN4-203ENST00000435050 KRTAP1-4P0C5Y4 121 aa6.98□□□□□ -1.29
CLDN4-203ENST00000435050 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
CLDN4-203ENST00000435050 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.29
CLDN4-203ENST00000435050 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
CLDN4-203ENST00000435050 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
CLDN4-203ENST00000435050 Q5VV11 94 aa6.92□□□□□ -1.3
CLDN4-203ENST00000435050 ACYP2P14621 99 aa6.91□□□□□ -1.3
CLDN4-203ENST00000435050 HRES1P13985 223 aa6.91□□□□□ -1.3
CLDN4-203ENST00000435050 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
CLDN4-203ENST00000435050 DNAH17Q9UFH2 4485 aa6.9□□□□□ -1.31
CLDN4-203ENST00000435050 DNAH2Q9P225 4427 aa6.9□□□□□ -1.31
CLDN4-203ENST00000435050 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
CLDN4-203ENST00000435050 Q5VSD8 79 aa6.89□□□□□ -1.31
CLDN4-203ENST00000435050 Q8N1X5 172 aa6.89□□□□□ -1.31
CLDN4-203ENST00000435050 DYNC2H1Q8NCM8 4307 aaKnown RBP6.87□□□□□ -1.31
CLDN4-203ENST00000435050 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
CLDN4-203ENST00000435050 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
CLDN4-203ENST00000435050 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
CLDN4-203ENST00000435050 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
CLDN4-203ENST00000435050 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
CLDN4-203ENST00000435050 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
CLDN4-203ENST00000435050 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
CLDN4-203ENST00000435050 A0A1B0GU69 56 aa6.8□□□□□ -1.32
CLDN4-203ENST00000435050 A6NN06 94 aa6.8□□□□□ -1.32
CLDN4-203ENST00000435050 DNAH5Q8TE73 4624 aa6.77□□□□□ -1.33
CLDN4-203ENST00000435050 Q75L30 129 aa6.77□□□□□ -1.33
CLDN4-203ENST00000435050 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
CLDN4-203ENST00000435050 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
CLDN4-203ENST00000435050 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
CLDN4-203ENST00000435050 FAT1Q14517 4588 aa6.74□□□□□ -1.33
CLDN4-203ENST00000435050 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
CLDN4-203ENST00000435050 ALMS1Q8TCU4 4167 aa6.72□□□□□ -1.33
CLDN4-203ENST00000435050 SPINK7P58062 85 aa6.71□□□□□ -1.33
CLDN4-203ENST00000435050 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
CLDN4-203ENST00000435050 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
CLDN4-203ENST00000435050 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
CLDN4-203ENST00000435050 RPS29P62273 56 aaKnown RBP6.68□□□□□ -1.34
CLDN4-203ENST00000435050 MIR22HGQ0VDD5 57 aa6.65□□□□□ -1.34
CLDN4-203ENST00000435050 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
CLDN4-203ENST00000435050 SACSQ9NZJ4 4579 aa6.65□□□□□ -1.35
CLDN4-203ENST00000435050 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
CLDN4-203ENST00000435050 J3QL48 77 aa6.63□□□□□ -1.35
CLDN4-203ENST00000435050 PKHD1P08F94 4074 aa6.63□□□□□ -1.35
CLDN4-203ENST00000435050 VPS13BQ7Z7G8 4022 aa6.62□□□□□ -1.35
CLDN4-203ENST00000435050 UQCR11O14957 56 aa6.59□□□□□ -1.35
CLDN4-203ENST00000435050 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
CLDN4-203ENST00000435050 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
CLDN4-203ENST00000435050 A8MUU9 505 aa6.57□□□□□ -1.36
CLDN4-203ENST00000435050 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
CLDN4-203ENST00000435050 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
CLDN4-203ENST00000435050 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
CLDN4-203ENST00000435050 PKD1P98161 4303 aa6.49□□□□□ -1.37
CLDN4-203ENST00000435050 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
CLDN4-203ENST00000435050 COX6B2Q6YFQ2 88 aa6.47□□□□□ -1.37
CLDN4-203ENST00000435050 RYR2Q92736 4967 aa6.46□□□□□ -1.37
CLDN4-203ENST00000435050 ROMO1P60602 79 aa6.46□□□□□ -1.38
CLDN4-203ENST00000435050 XP32Q5T750 250 aa6.46□□□□□ -1.38
CLDN4-203ENST00000435050 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
CLDN4-203ENST00000435050 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms