RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 K7ERJ3 54 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 HIST1H2BKO60814 126 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 HIST1H2BJP06899 126 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 IGLC6P0CF74 106 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 IFI27P40305 119 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 AKR1D1P51857 326 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 POLR2KP53803 58 aaKnown RBP0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 NDUFA6P56556 154 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 NEDD8Q15843 81 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 Q5XG85 94 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 SFTA2Q6UW10 78 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 PSMG3Q9BT73 122 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 PRO1933Q9H354 126 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 LAMTOR2Q9Y2Q5 125 aa0.78□□□□□ -2.28
HMGB1P27-201ENST00000431429 CTXND1A0A1B0GTU2 59 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 LYRM1O43325 122 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 ERC2-IT1O76042 136 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 Q5BKY6 102 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 Q5VV11 94 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 HRCT1Q6UXD1 115 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 RAB37Q96AX2 223 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 RPL39LQ96EH5 51 aaKnown RBP0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 TMEM141Q96I45 108 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 C20orf78Q9BR46 151 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 CNFNQ9BYD5 112 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 TMEM191AQ9H0A3 160 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 ORMDL1Q9P0S3 153 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 HSPB11Q9Y547 144 aa0.77□□□□□ -2.29
HMGB1P27-201ENST00000431429 ZNF815PA8K554 130 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 LINC00587B1AMM8 73 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 RPL35P42766 123 aaKnown RBP0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 GNG4P50150 75 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 ALKAL2Q6UX46 152 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 Q6ZUT4 128 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 Q96NJ1 140 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 KCNQ1DNQ9H478 68 aa0.76□□□□□ -2.29
HMGB1P27-201ENST00000431429 A0A1B0GUT8 65 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 hDV103S1A0JD37 113 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 LINC01549A6NIU2 74 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 H3BRM9 83 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 FABP2P12104 132 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 SPRR1AP35321 89 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 TEN1Q86WV5 123 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 KRTAP8-1Q8IUC2 63 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 COX7B2Q8TF08 81 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 PPP1R1CQ8WVI7 109 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 SMIM3Q9BZL3 60 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 SPANXCQ9NY87 97 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 NAT8BQ9UHF3 227 aa0.75□□□□□ -2.29
HMGB1P27-201ENST00000431429 K7EMI3 77 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 MPC2O95563 127 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 S100A8P05109 93 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 COX7CP15954 63 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 CKS2P33552 79 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 LINC00158P58513 81 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 RPL39P62891 51 aaKnown RBP0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 RPL7L1Q6DKI1 246 aaKnown RBP0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 Q6ZRX8 168 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 LINC00299Q6ZSB3 139 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 KCNRGQ8N5I3 272 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 BATF3Q9NR55 127 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 CDKN2A-AS1Q9UH64 79 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 ERG28Q9UKR5 140 aa0.74□□□□□ -2.29
HMGB1P27-201ENST00000431429 TEX49A0A1B0GTD5 131 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 FAM236AA0A1B0GUQ0 79 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 FAM236BA0A1B0GV22 79 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 UMAD1C9J7I0 102 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 J3KT08 172 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 DNAL4O96015 105 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 SPRR1BP22528 89 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 S100A7L2Q5SY68 101 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 AMELXQ99217 191 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 SMIM2Q9BVW6 85 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 MANBALQ9NQG1 85 aa0.73□□□□□ -2.29
HMGB1P27-201ENST00000431429 TRBV7-6A0A0J9YX20 115 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 TRBV10-3A0A0K0K1G6 114 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 HIGD1CA8MV81 97 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 F8W1H4 67 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 F8WEM9 126 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 FABP4P15090 132 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 PRELID3AQ96N28 172 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 NXT2Q9NPJ8 142 aaKnown RBP0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
HMGB1P27-201ENST00000431429 TRAV23DV6A0A075B6W5 121 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 IGIPA6NJ69 53 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 DPM2O94777 84 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPINK8P0C7L1 97 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 C3orf79P0CE67 100 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 SCGB1A1P11684 91 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 IL7P13232 177 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 KRTAP19-8Q3LI54 63 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 H1FX-AS1Q4G0G2 97 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 MEIG1Q5JSS6 88 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 Q6JHZ5 121 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 MRPL54Q6P161 138 aaKnown RBP0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 DEFB105AQ8NG35 78 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 GNG13Q9P2W3 67 aa0.71□□□□□ -2.3
HMGB1P27-201ENST00000431429 V9GYH0 126 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms