RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
HPS4-205ENST00000429411 PSORS1C2Q9UIG4 136 aa4.93□□□□□ -1.62
HPS4-205ENST00000429411 Q5VV11 94 aa4.92□□□□□ -1.62
HPS4-205ENST00000429411 A0A087WTM6 91 aa4.91□□□□□ -1.62
HPS4-205ENST00000429411 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
HPS4-205ENST00000429411 LIMD2Q9BT23 127 aa4.9□□□□□ -1.62
HPS4-205ENST00000429411 STARD9Q9P2P6 4700 aa4.9□□□□□ -1.62
HPS4-205ENST00000429411 COA5Q86WW8 74 aa4.9□□□□□ -1.63
HPS4-205ENST00000429411 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
HPS4-205ENST00000429411 LYSTQ99698 3801 aa4.89□□□□□ -1.63
HPS4-205ENST00000429411 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
HPS4-205ENST00000429411 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
HPS4-205ENST00000429411 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
HPS4-205ENST00000429411 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
HPS4-205ENST00000429411 KRTAP29-1A8MX34 341 aaPredicted RBP4.87□□□□□ -1.63
HPS4-205ENST00000429411 PLECQ15149 4684 aaKnown RBP4.87□□□□□ -1.63
HPS4-205ENST00000429411 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
HPS4-205ENST00000429411 SPACA4Q8TDM5 124 aa4.86□□□□□ -1.63
HPS4-205ENST00000429411 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
HPS4-205ENST00000429411 ZNF861PO60384 105 aa4.86□□□□□ -1.63
HPS4-205ENST00000429411 A0A087X002 238 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 H3BPC8 53 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 SPRR1BP22528 89 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 RYR3Q15413 4870 aa4.85□□□□□ -1.63
HPS4-205ENST00000429411 DNAH10Q8IVF4 4471 aa4.84□□□□□ -1.63
HPS4-205ENST00000429411 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
HPS4-205ENST00000429411 SMR3BP02814 79 aaPredicted RBP4.83□□□□□ -1.64
HPS4-205ENST00000429411 Q8N9P0 234 aaPredicted RBP4.83□□□□□ -1.64
HPS4-205ENST00000429411 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
HPS4-205ENST00000429411 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
HPS4-205ENST00000429411 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
HPS4-205ENST00000429411 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
HPS4-205ENST00000429411 ROMO1P60602 79 aa4.81□□□□□ -1.64
HPS4-205ENST00000429411 Q6ZRN7 208 aaPredicted RBP4.81□□□□□ -1.64
HPS4-205ENST00000429411 SPINK1P00995 79 aa4.81□□□□□ -1.64
HPS4-205ENST00000429411 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
HPS4-205ENST00000429411 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
HPS4-205ENST00000429411 HYDINQ4G0P3 5121 aa4.8□□□□□ -1.64
HPS4-205ENST00000429411 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
HPS4-205ENST00000429411 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
HPS4-205ENST00000429411 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
HPS4-205ENST00000429411 K7ERS5 55 aa4.78□□□□□ -1.64
HPS4-205ENST00000429411 KRTAP10-2P60368 255 aa4.77□□□□□ -1.65
HPS4-205ENST00000429411 KRTAP13-1Q8IUC0 172 aa4.77□□□□□ -1.65
HPS4-205ENST00000429411 Q96NJ1 140 aa4.77□□□□□ -1.65
HPS4-205ENST00000429411 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
HPS4-205ENST00000429411 SACSQ9NZJ4 4579 aa4.76□□□□□ -1.65
HPS4-205ENST00000429411 Q5W150 140 aa4.76□□□□□ -1.65
HPS4-205ENST00000429411 HRES1P13985 223 aa4.76□□□□□ -1.65
HPS4-205ENST00000429411 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
HPS4-205ENST00000429411 EPPK1P58107 5090 aaKnown RBP4.75□□□□□ -1.65
HPS4-205ENST00000429411 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
HPS4-205ENST00000429411 DNAH1Q9P2D7 4330 aa4.74□□□□□ -1.65
HPS4-205ENST00000429411 FRAS1Q86XX4 4008 aa4.74□□□□□ -1.65
HPS4-205ENST00000429411 ASB16-AS1Q495Z4 193 aa4.74□□□□□ -1.65
HPS4-205ENST00000429411 ACYP2P14621 99 aa4.73□□□□□ -1.65
HPS4-205ENST00000429411 SPINK7P58062 85 aa4.72□□□□□ -1.65
HPS4-205ENST00000429411 LINC00483Q53H64 154 aa4.72□□□□□ -1.65
HPS4-205ENST00000429411 Q6ZR54 194 aa4.72□□□□□ -1.65
HPS4-205ENST00000429411 A0A1B0GU69 56 aa4.71□□□□□ -1.66
HPS4-205ENST00000429411 RYR2Q92736 4967 aa4.71□□□□□ -1.66
HPS4-205ENST00000429411 SSBP3-AS1Q7Z2R9 100 aa4.71□□□□□ -1.66
HPS4-205ENST00000429411 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
HPS4-205ENST00000429411 TYMSOSQ8TAI1 123 aa4.7□□□□□ -1.66
HPS4-205ENST00000429411 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
HPS4-205ENST00000429411 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
HPS4-205ENST00000429411 KRTAP10-1P60331 282 aa4.67□□□□□ -1.66
HPS4-205ENST00000429411 Q8N1X5 172 aa4.67□□□□□ -1.66
HPS4-205ENST00000429411 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
HPS4-205ENST00000429411 VPS13DQ5THJ4 4388 aa4.66□□□□□ -1.66
HPS4-205ENST00000429411 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
HPS4-205ENST00000429411 P0C880 135 aa4.63□□□□□ -1.67
HPS4-205ENST00000429411 KRTAP13-2Q52LG2 175 aa4.63□□□□□ -1.67
HPS4-205ENST00000429411 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
HPS4-205ENST00000429411 FAT1Q14517 4588 aa4.61□□□□□ -1.67
HPS4-205ENST00000429411 DNAH11Q96DT5 4516 aa4.61□□□□□ -1.67
HPS4-205ENST00000429411 RYR1P21817 5038 aa4.6□□□□□ -1.67
HPS4-205ENST00000429411 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
HPS4-205ENST00000429411 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
HPS4-205ENST00000429411 Q5VSD8 79 aa4.58□□□□□ -1.68
HPS4-205ENST00000429411 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
HPS4-205ENST00000429411 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
HPS4-205ENST00000429411 UQCR11O14957 56 aa4.57□□□□□ -1.68
HPS4-205ENST00000429411 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
HPS4-205ENST00000429411 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
HPS4-205ENST00000429411 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
HPS4-205ENST00000429411 DYNC1H1Q14204 4646 aaKnown RBP4.55□□□□□ -1.68
HPS4-205ENST00000429411 LRP1BQ9NZR2 4599 aa4.54□□□□□ -1.68
HPS4-205ENST00000429411 BIRC6Q9NR09 4857 aa4.54□□□□□ -1.68
HPS4-205ENST00000429411 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
HPS4-205ENST00000429411 A8MUU9 505 aa4.52□□□□□ -1.69
HPS4-205ENST00000429411 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
HPS4-205ENST00000429411 HERC2O95714 4834 aa4.51□□□□□ -1.69
HPS4-205ENST00000429411 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
HPS4-205ENST00000429411 KRTAP1-4P0C5Y4 121 aa4.5□□□□□ -1.69
HPS4-205ENST00000429411 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
HPS4-205ENST00000429411 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
HPS4-205ENST00000429411 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms