RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DEFB132Q7Z7B7 95 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 PSORS1C2Q9UIG4 136 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 SPENQ96T58 3664 aaKnown RBP1.41□□□□□ -2.18
LINC01040-201ENST00000425048 VWFP04275 2813 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 FRYLO94915 3013 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 TRIOO75962 3097 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 FRYQ5TBA9 3013 aa1.4□□□□□ -2.18
LINC01040-201ENST00000425048 SPEGQ15772 3267 aa1.4□□□□□ -2.19
LINC01040-201ENST00000425048 LELP1Q5T871 98 aa1.4□□□□□ -2.19
LINC01040-201ENST00000425048 PRO0255Q9UI72 69 aa1.4□□□□□ -2.19
LINC01040-201ENST00000425048 MUC2Q02817 5179 aa1.4□□□□□ -2.19
LINC01040-201ENST00000425048 DSPP15924 2871 aaKnown RBP1.4□□□□□ -2.19
LINC01040-201ENST00000425048 TPRP12270 2363 aaKnown RBP1.4□□□□□ -2.19
LINC01040-201ENST00000425048 COL6A5A8TX70 2615 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 FREM2Q5SZK8 3169 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 MAP1BP46821 2468 aaKnown RBP1.39□□□□□ -2.19
LINC01040-201ENST00000425048 A0A096LPF7 62 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 SSBP3-AS1Q7Z2R9 100 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 KIAA1109Q2LD37 5005 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 HTTP42858 3142 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 C2CD3Q4AC94 2353 aa1.39□□□□□ -2.19
LINC01040-201ENST00000425048 NBPF19A0A087WUL8 3843 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 DEFB130BP0DP73 79 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 DEFB130AP0DP74 79 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 DNHD1Q96M86 4753 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 SPTA1P02549 2419 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 LAMA3Q16787 3333 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 STAB1Q9NY15 2570 aa1.38□□□□□ -2.19
LINC01040-201ENST00000425048 FLG2Q5D862 2391 aaPredicted RBP1.37□□□□□ -2.19
LINC01040-201ENST00000425048 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 LAMA1P25391 3075 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 C4orf3Q8WVX3 66 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 CELSR2Q9HCU4 2923 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 RELNP78509 3460 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 JMJD1CQ15652 2540 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 SPG11Q96JI7 2443 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 REV3LO60673 3130 aa1.37□□□□□ -2.19
LINC01040-201ENST00000425048 OTOGQ6ZRI0 2925 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 BOD1L1Q8NFC6 3051 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 BRCA2P51587 3418 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 PRLHP81277 87 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 C10orf95Q9H7T3 257 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 NCOR2Q9Y618 2525 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 DMXL2Q8TDJ6 3036 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 CHD9Q3L8U1 2897 aa1.36□□□□□ -2.19
LINC01040-201ENST00000425048 TTC28Q96AY4 2481 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 CACNA1HO95180 2353 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 ITPR1Q14643 2758 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 DNAH1Q9P2D7 4330 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 A0A1B0GU33 70 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 AKAP13Q12802 2813 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 NBEAL2Q6ZNJ1 2754 aa1.35□□□□□ -2.19
LINC01040-201ENST00000425048 SMG1Q96Q15 3661 aaKnown RBP1.35□□□□□ -2.19
LINC01040-201ENST00000425048 FBN2P35556 2912 aa1.34□□□□□ -2.19
LINC01040-201ENST00000425048 CDH23Q9H251 3354 aa1.34□□□□□ -2.19
LINC01040-201ENST00000425048 GVINP1Q7Z2Y8 2422 aa1.34□□□□□ -2.19
LINC01040-201ENST00000425048 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
LINC01040-201ENST00000425048 CFAP46Q8IYW2 2715 aa1.34□□□□□ -2.2
LINC01040-201ENST00000425048 LAMA5O15230 3695 aa1.33□□□□□ -2.2
LINC01040-201ENST00000425048 TENM4Q6N022 2769 aa1.33□□□□□ -2.2
LINC01040-201ENST00000425048 CCDC168Q8NDH2 2452 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 MYO9AB2RTY4 2548 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 RYR1P21817 5038 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 KRTAP12-1P59990 96 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 SPTAN1Q13813 2472 aaKnown RBP1.32□□□□□ -2.2
LINC01040-201ENST00000425048 UBR5O95071 2799 aaPredicted RBP1.32□□□□□ -2.2
LINC01040-201ENST00000425048 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
LINC01040-201ENST00000425048 A0A096LNI7 61 aa1.31□□□□□ -2.2
LINC01040-201ENST00000425048 COX6B2Q6YFQ2 88 aa1.31□□□□□ -2.2
LINC01040-201ENST00000425048 FN1P02751 2386 aaKnown RBP1.31□□□□□ -2.2
LINC01040-201ENST00000425048 CEP290O15078 2479 aa1.31□□□□□ -2.2
LINC01040-201ENST00000425048 RYR3Q15413 4870 aa1.31□□□□□ -2.2
LINC01040-201ENST00000425048 DCHS2Q6V1P9 2916 aa1.31□□□□□ -2.2
LINC01040-201ENST00000425048 LOC400499M0QZD8 3231 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 ANK3Q12955 4377 aaKnown RBP1.3□□□□□ -2.2
LINC01040-201ENST00000425048 DMXL1Q9Y485 3027 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 COL12A1Q99715 3063 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 FRAS1Q86XX4 4008 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 IGSF10Q6WRI0 2623 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 H3BNG1 76 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 DEFB4AO15263 64 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 SPINK1P00995 79 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
LINC01040-201ENST00000425048 LINC01556Q5JQF7 62 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 MAP1AP78559 2803 aaPredicted RBP1.3□□□□□ -2.2
LINC01040-201ENST00000425048 ANKHD1Q8IWZ3 2542 aaKnown RBP1.3□□□□□ -2.2
LINC01040-201ENST00000425048 PIEZO2Q9H5I5 2752 aa1.3□□□□□ -2.2
LINC01040-201ENST00000425048 HRNRQ86YZ3 2850 aaPredicted RBP1.29□□□□□ -2.2
LINC01040-201ENST00000425048 TACC2O95359 2948 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 ASPMQ8IZT6 3477 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 TEX15Q9BXT5 2789 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 HTN3P15516 51 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 F8P00451 2351 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
LINC01040-201ENST00000425048 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
LINC01040-201ENST00000425048 HYDINQ4G0P3 5121 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms