RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
CMSS1-201ENST00000421999 KLKP1Q107X0 134 aa5.87□□□□□ -1.47
CMSS1-201ENST00000421999 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
CMSS1-201ENST00000421999 OXTP01178 125 aa5.86□□□□□ -1.47
CMSS1-201ENST00000421999 CMYA5Q8N3K9 4069 aa5.85□□□□□ -1.47
CMSS1-201ENST00000421999 SPRR1BP22528 89 aa5.83□□□□□ -1.48
CMSS1-201ENST00000421999 A0A1B0GU69 56 aa5.82□□□□□ -1.48
CMSS1-201ENST00000421999 IGLV8-61A0A075B6I0 122 aa5.81□□□□□ -1.48
CMSS1-201ENST00000421999 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
CMSS1-201ENST00000421999 M0R2T5 61 aa5.8□□□□□ -1.48
CMSS1-201ENST00000421999 Q8N1X5 172 aa5.8□□□□□ -1.48
CMSS1-201ENST00000421999 A0A087X002 238 aa5.8□□□□□ -1.48
CMSS1-201ENST00000421999 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
CMSS1-201ENST00000421999 ANK2Q01484 3957 aa5.79□□□□□ -1.48
CMSS1-201ENST00000421999 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
CMSS1-201ENST00000421999 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
CMSS1-201ENST00000421999 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
CMSS1-201ENST00000421999 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
CMSS1-201ENST00000421999 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
CMSS1-201ENST00000421999 LINC00472Q9H8W2 130 aa5.72□□□□□ -1.49
CMSS1-201ENST00000421999 A8MUN3 132 aa5.71□□□□□ -1.5
CMSS1-201ENST00000421999 COA5Q86WW8 74 aa5.71□□□□□ -1.5
CMSS1-201ENST00000421999 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
CMSS1-201ENST00000421999 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
CMSS1-201ENST00000421999 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
CMSS1-201ENST00000421999 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
CMSS1-201ENST00000421999 SPINK7P58062 85 aa5.67□□□□□ -1.5
CMSS1-201ENST00000421999 Q1T7F1 81 aa5.66□□□□□ -1.5
CMSS1-201ENST00000421999 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.51
CMSS1-201ENST00000421999 HUWE1Q7Z6Z7 4374 aaKnown RBP5.65□□□□□ -1.51
CMSS1-201ENST00000421999 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
CMSS1-201ENST00000421999 OCR1Q9BZK8 76 aa5.64□□□□□ -1.51
CMSS1-201ENST00000421999 LCA10Q71F78 164 aa5.64□□□□□ -1.51
CMSS1-201ENST00000421999 KRTAP13-2Q52LG2 175 aa5.63□□□□□ -1.51
CMSS1-201ENST00000421999 HRES1P13985 223 aa5.62□□□□□ -1.51
CMSS1-201ENST00000421999 H3BS24 57 aa5.61□□□□□ -1.51
CMSS1-201ENST00000421999 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
CMSS1-201ENST00000421999 Q5W150 140 aa5.59□□□□□ -1.51
CMSS1-201ENST00000421999 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
CMSS1-201ENST00000421999 UQCR11O14957 56 aa5.57□□□□□ -1.52
CMSS1-201ENST00000421999 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
CMSS1-201ENST00000421999 A0A0D9SG42 100 aa5.56□□□□□ -1.52
CMSS1-201ENST00000421999 DNAH9Q9NYC9 4486 aa5.55□□□□□ -1.52
CMSS1-201ENST00000421999 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
CMSS1-201ENST00000421999 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
CMSS1-201ENST00000421999 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
CMSS1-201ENST00000421999 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
CMSS1-201ENST00000421999 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
CMSS1-201ENST00000421999 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
CMSS1-201ENST00000421999 S4R3F8 94 aa5.51□□□□□ -1.53
CMSS1-201ENST00000421999 Q5VV11 94 aa5.48□□□□□ -1.53
CMSS1-201ENST00000421999 MIR22HGQ0VDD5 57 aa5.48□□□□□ -1.53
CMSS1-201ENST00000421999 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
CMSS1-201ENST00000421999 CSMD3Q7Z407 3707 aa5.47□□□□□ -1.53
CMSS1-201ENST00000421999 Q75L30 129 aa5.46□□□□□ -1.53
CMSS1-201ENST00000421999 PRKDCP78527 4128 aaKnown RBP5.46□□□□□ -1.54
CMSS1-201ENST00000421999 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
CMSS1-201ENST00000421999 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
CMSS1-201ENST00000421999 R4GN34 69 aa5.43□□□□□ -1.54
CMSS1-201ENST00000421999 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
CMSS1-201ENST00000421999 A0A1B0GU33 70 aa5.41□□□□□ -1.54
CMSS1-201ENST00000421999 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
CMSS1-201ENST00000421999 LYSTQ99698 3801 aa5.4□□□□□ -1.54
CMSS1-201ENST00000421999 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
CMSS1-201ENST00000421999 DYNC2H1Q8NCM8 4307 aaKnown RBP5.38□□□□□ -1.55
CMSS1-201ENST00000421999 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
CMSS1-201ENST00000421999 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
CMSS1-201ENST00000421999 A6NN06 94 aa5.35□□□□□ -1.55
CMSS1-201ENST00000421999 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
CMSS1-201ENST00000421999 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
CMSS1-201ENST00000421999 DMAC1Q96GE9 116 aa5.32□□□□□ -1.56
CMSS1-201ENST00000421999 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
CMSS1-201ENST00000421999 A8MU10 97 aa5.32□□□□□ -1.56
CMSS1-201ENST00000421999 M0QZ58 72 aa5.32□□□□□ -1.56
CMSS1-201ENST00000421999 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
CMSS1-201ENST00000421999 DNAH1Q9P2D7 4330 aa5.31□□□□□ -1.56
CMSS1-201ENST00000421999 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
CMSS1-201ENST00000421999 XP32Q5T750 250 aa5.29□□□□□ -1.56
CMSS1-201ENST00000421999 A8MUU9 505 aa5.28□□□□□ -1.56
CMSS1-201ENST00000421999 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
CMSS1-201ENST00000421999 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
CMSS1-201ENST00000421999 DNAH10Q8IVF4 4471 aa5.25□□□□□ -1.57
CMSS1-201ENST00000421999 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
CMSS1-201ENST00000421999 DNAH11Q96DT5 4516 aa5.21□□□□□ -1.58
CMSS1-201ENST00000421999 ALMS1Q8TCU4 4167 aa5.2□□□□□ -1.58
CMSS1-201ENST00000421999 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
CMSS1-201ENST00000421999 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
CMSS1-201ENST00000421999 KMT2AQ03164 3969 aa5.19□□□□□ -1.58
CMSS1-201ENST00000421999 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
CMSS1-201ENST00000421999 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
CMSS1-201ENST00000421999 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
CMSS1-201ENST00000421999 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
CMSS1-201ENST00000421999 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
CMSS1-201ENST00000421999 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.58
CMSS1-201ENST00000421999 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.59
CMSS1-201ENST00000421999 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
CMSS1-201ENST00000421999 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
CMSS1-201ENST00000421999 HECTD4Q9Y4D8 3996 aa5.11□□□□□ -1.59
CMSS1-201ENST00000421999 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
CMSS1-201ENST00000421999 DYNC1H1Q14204 4646 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms