RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
PKP4-204ENST00000421462 MDFIQ99750 246 aa9.93□□□□□ -0.82
PKP4-204ENST00000421462 KRTAP13-1Q8IUC0 172 aa9.91□□□□□ -0.82
PKP4-204ENST00000421462 LINC00313P59037 77 aa9.91□□□□□ -0.82
PKP4-204ENST00000421462 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
PKP4-204ENST00000421462 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
PKP4-204ENST00000421462 WWC2-AS2Q96NR7 200 aa9.87□□□□□ -0.83
PKP4-204ENST00000421462 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
PKP4-204ENST00000421462 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
PKP4-204ENST00000421462 ACYP2P14621 99 aa9.84□□□□□ -0.83
PKP4-204ENST00000421462 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
PKP4-204ENST00000421462 A0A1B0GU69 56 aa9.81□□□□□ -0.84
PKP4-204ENST00000421462 NBDYA0A0U1RRE5 68 aa9.79□□□□□ -0.84
PKP4-204ENST00000421462 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
PKP4-204ENST00000421462 ZNF706Q9Y5V0 76 aaPredicted RBP9.78□□□□□ -0.84
PKP4-204ENST00000421462 TGP01266 2768 aa9.78□□□□□ -0.84
PKP4-204ENST00000421462 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
PKP4-204ENST00000421462 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
PKP4-204ENST00000421462 C8orf87E5RJ46 101 aa9.76□□□□□ -0.85
PKP4-204ENST00000421462 IGLV5-52A0A0A0MRZ9 124 aa9.73□□□□□ -0.85
PKP4-204ENST00000421462 ZNF861PO60384 105 aa9.73□□□□□ -0.85
PKP4-204ENST00000421462 FBN3Q75N90 2809 aa9.72□□□□□ -0.85
PKP4-204ENST00000421462 DNAH8Q96JB1 4490 aa9.72□□□□□ -0.85
PKP4-204ENST00000421462 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.85
PKP4-204ENST00000421462 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
PKP4-204ENST00000421462 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
PKP4-204ENST00000421462 IGKV2D-30A0A075B6S6 120 aa9.69□□□□□ -0.86
PKP4-204ENST00000421462 IGKV2-30P06310 120 aa9.69□□□□□ -0.86
PKP4-204ENST00000421462 RTL8CO15255 209 aa9.68□□□□□ -0.86
PKP4-204ENST00000421462 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
PKP4-204ENST00000421462 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
PKP4-204ENST00000421462 SPINK1P00995 79 aa9.67□□□□□ -0.86
PKP4-204ENST00000421462 A0A087WTM6 91 aa9.66□□□□□ -0.86
PKP4-204ENST00000421462 MEGF8Q7Z7M0 2845 aa9.63□□□□□ -0.87
PKP4-204ENST00000421462 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
PKP4-204ENST00000421462 UQCR11O14957 56 aa9.62□□□□□ -0.87
PKP4-204ENST00000421462 PLA2G1BP04054 148 aaKnown RBP9.61□□□□□ -0.87
PKP4-204ENST00000421462 ALMS1Q8TCU4 4167 aa9.6□□□□□ -0.87
PKP4-204ENST00000421462 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
PKP4-204ENST00000421462 SPATA8Q6RVD6 105 aa9.59□□□□□ -0.87
PKP4-204ENST00000421462 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
PKP4-204ENST00000421462 IGLV7-43P04211 117 aa9.57□□□□□ -0.88
PKP4-204ENST00000421462 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
PKP4-204ENST00000421462 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
PKP4-204ENST00000421462 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
PKP4-204ENST00000421462 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
PKP4-204ENST00000421462 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
PKP4-204ENST00000421462 Q8N1X5 172 aa9.5□□□□□ -0.89
PKP4-204ENST00000421462 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
PKP4-204ENST00000421462 STARD9Q9P2P6 4700 aa9.47□□□□□ -0.89
PKP4-204ENST00000421462 SSBP3-AS1Q7Z2R9 100 aa9.45□□□□□ -0.9
PKP4-204ENST00000421462 H3BS24 57 aa9.45□□□□□ -0.9
PKP4-204ENST00000421462 KRTAP13-2Q52LG2 175 aa9.4□□□□□ -0.9
PKP4-204ENST00000421462 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
PKP4-204ENST00000421462 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
PKP4-204ENST00000421462 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
PKP4-204ENST00000421462 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
PKP4-204ENST00000421462 C1orf134Q5TEV5 83 aa9.35□□□□□ -0.91
PKP4-204ENST00000421462 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
PKP4-204ENST00000421462 LY6G6CO95867 125 aa9.33□□□□□ -0.92
PKP4-204ENST00000421462 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
PKP4-204ENST00000421462 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
PKP4-204ENST00000421462 CRIPTQ9P021 101 aa9.3□□□□□ -0.92
PKP4-204ENST00000421462 TYMSOSQ8TAI1 123 aa9.25□□□□□ -0.93
PKP4-204ENST00000421462 Q6ZSA8 131 aa9.24□□□□□ -0.93
PKP4-204ENST00000421462 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
PKP4-204ENST00000421462 H0YAA0 97 aa9.23□□□□□ -0.93
PKP4-204ENST00000421462 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
PKP4-204ENST00000421462 PRKDCP78527 4128 aaKnown RBP9.22□□□□□ -0.93
PKP4-204ENST00000421462 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
PKP4-204ENST00000421462 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
PKP4-204ENST00000421462 KRTAP10-1P60331 282 aa9.15□□□□□ -0.94
PKP4-204ENST00000421462 DNHD1Q96M86 4753 aa9.15□□□□□ -0.94
PKP4-204ENST00000421462 A0A1B0GU33 70 aa9.15□□□□□ -0.95
PKP4-204ENST00000421462 KRTAP1-4P0C5Y4 121 aa9.14□□□□□ -0.95
PKP4-204ENST00000421462 DNAH5Q8TE73 4624 aa9.14□□□□□ -0.95
PKP4-204ENST00000421462 A8MUU9 505 aa9.14□□□□□ -0.95
PKP4-204ENST00000421462 KRTAP25-1Q3LHN0 102 aa9.11□□□□□ -0.95
PKP4-204ENST00000421462 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
PKP4-204ENST00000421462 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
PKP4-204ENST00000421462 ROMO1P60602 79 aa9.02□□□□□ -0.97
PKP4-204ENST00000421462 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
PKP4-204ENST00000421462 FAT2Q9NYQ8 4349 aa8.99□□□□□ -0.97
PKP4-204ENST00000421462 K7ERS5 55 aa8.96□□□□□ -0.98
PKP4-204ENST00000421462 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
PKP4-204ENST00000421462 A0A0D9SG42 100 aa8.92□□□□□ -0.98
PKP4-204ENST00000421462 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
PKP4-204ENST00000421462 HYDINQ4G0P3 5121 aa8.89□□□□□ -0.99
PKP4-204ENST00000421462 PKD1P98161 4303 aa8.85□□□□□ -0.99
PKP4-204ENST00000421462 P0C880 135 aa8.81□□□□□ -1
PKP4-204ENST00000421462 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
PKP4-204ENST00000421462 C20orf166-AS1Q96NR2 134 aa8.79□□□□□ -1
PKP4-204ENST00000421462 PKHD1P08F94 4074 aa8.79□□□□□ -1
PKP4-204ENST00000421462 C10orf95Q9H7T3 257 aa8.76□□□□□ -1.01
PKP4-204ENST00000421462 FAT1Q14517 4588 aa8.75□□□□□ -1.01
PKP4-204ENST00000421462 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
PKP4-204ENST00000421462 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
PKP4-204ENST00000421462 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
PKP4-204ENST00000421462 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.03
PKP4-204ENST00000421462 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms