RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 TMEM254Q8TBM7 123 aa2.97□□□□□ -1.93
GTF3C2-203ENST00000415683 RPL39LQ96EH5 51 aaKnown RBP2.97□□□□□ -1.93
GTF3C2-203ENST00000415683 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
GTF3C2-203ENST00000415683 MYCBP2O75592 4640 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 IGLV4-60A0A075B6I1 120 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 A0A1W2PNM2 257 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 PPP1R17O96001 155 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 LINC00483Q53H64 154 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 KRTAP26-1Q6PEX3 210 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 LITAFQ99732 161 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 CNFNQ9BYD5 112 aa2.96□□□□□ -1.94
GTF3C2-203ENST00000415683 PRR34Q9NV39 138 aa2.95□□□□□ -1.94
GTF3C2-203ENST00000415683 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
GTF3C2-203ENST00000415683 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 IGHV3-64A0A075B6Q5 118 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 D6R8Y8 96 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 ELOF1P60002 83 aaKnown RBP2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 MUSTN1Q8IVN3 82 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 V9GYV3 84 aa2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 DMBT1Q9UGM3 2413 aaPredicted RBP2.94□□□□□ -1.94
GTF3C2-203ENST00000415683 A0A087WVE0 104 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 TRBV6-5A0A0K0K1A5 114 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 SMIM27A0A1W2PRY6 76 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 GAS8-AS1O95177 125 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 CFC1P0CG37 223 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 Q5W150 140 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 C9orf163Q8N9P6 203 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
GTF3C2-203ENST00000415683 A0A1B0GU33 70 aa2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 LINC00959A0A1B0GUT2 108 aa2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 IGLV7-43P04211 117 aa2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 POLR2KP53803 58 aaKnown RBP2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 RPL37AP61513 92 aaKnown RBP2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 C9orf129Q5T035 196 aaKnown RBP2.92□□□□□ -1.94
GTF3C2-203ENST00000415683 TRAV12-1A0A0B4J245 112 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 CNBPP62633 177 aaKnown RBP2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 COX6A2Q02221 97 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 C1orf137Q5JT78 98 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 PRR15LQ9BU68 103 aa2.91□□□□□ -1.94
GTF3C2-203ENST00000415683 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
GTF3C2-203ENST00000415683 IGKV3D-7A0A0C4DH55 119 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 Q6ZSA8 131 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 AMELXQ99217 191 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 Q9BRP9 147 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 SMIM2Q9BVW6 85 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 ORMDL1Q9P0S3 153 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
GTF3C2-203ENST00000415683 DNAH8Q96JB1 4490 aa2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 A0A087WYN8 130 aa2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 GVQW2A0A096LPI5 108 aaPredicted RBP2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
GTF3C2-203ENST00000415683 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
GTF3C2-203ENST00000415683 SPAG11BQ08648 103 aa2.88□□□□□ -1.95
GTF3C2-203ENST00000415683 SPAG11AQ6PDA7 123 aa2.88□□□□□ -1.95
GTF3C2-203ENST00000415683 A0A096LNJ9 63 aa2.87□□□□□ -1.95
GTF3C2-203ENST00000415683 K7EMI3 77 aa2.87□□□□□ -1.95
GTF3C2-203ENST00000415683 KRTAP25-1Q3LHN0 102 aa2.87□□□□□ -1.95
GTF3C2-203ENST00000415683 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
GTF3C2-203ENST00000415683 A0A096LNI7 61 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 NDUFA1O15239 70 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 DNAL4O96015 105 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 DEFB116Q30KQ4 102 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 TOMM7Q9P0U1 55 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
GTF3C2-203ENST00000415683 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
GTF3C2-203ENST00000415683 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
GTF3C2-203ENST00000415683 LINC00846Q9NV44 126 aa2.85□□□□□ -1.95
GTF3C2-203ENST00000415683 FAM168BA1KXE4 195 aa2.84□□□□□ -1.95
GTF3C2-203ENST00000415683 PLNP26678 52 aa2.84□□□□□ -1.95
GTF3C2-203ENST00000415683 NREPQ16612 68 aa2.84□□□□□ -1.95
GTF3C2-203ENST00000415683 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
GTF3C2-203ENST00000415683 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.95
GTF3C2-203ENST00000415683 A0A1W2PNN7 141 aa2.83□□□□□ -1.96
GTF3C2-203ENST00000415683 LINC01546A6NGU7 62 aa2.83□□□□□ -1.96
GTF3C2-203ENST00000415683 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
GTF3C2-203ENST00000415683 FAT3Q8TDW7 4589 aa2.83□□□□□ -1.96
GTF3C2-203ENST00000415683 IGIPA6NJ69 53 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 F8VRH5 84 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 NDUFB1O75438 58 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 SPINK6Q6UWN8 80 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
GTF3C2-203ENST00000415683 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
GTF3C2-203ENST00000415683 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
GTF3C2-203ENST00000415683 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
GTF3C2-203ENST00000415683 Q8IZM0 81 aa2.8□□□□□ -1.96
GTF3C2-203ENST00000415683 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
GTF3C2-203ENST00000415683 PSORS1C2Q9UIG4 136 aa2.8□□□□□ -1.96
GTF3C2-203ENST00000415683 LINC00208Q96KT6 92 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms