RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 MYOM2P54296 1465 aa-7.15□□□□□ -3.55
MIR548F3-201ENST00000408509 ROCK2O75116 1388 aaKnown RBP-7.15□□□□□ -3.55
MIR548F3-201ENST00000408509 DPH3P1Q9H4G8 78 aa-7.15□□□□□ -3.55
MIR548F3-201ENST00000408509 GINS2Q9Y248 185 aa-7.15□□□□□ -3.55
MIR548F3-201ENST00000408509 HSPB11Q9Y547 144 aa-7.15□□□□□ -3.55
MIR548F3-201ENST00000408509 RAPGEF2Q9Y4G8 1499 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 OOSP1A8MZH6 123 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 H3BQ15 152 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 ATP5EP56381 51 aaPredicted RBP-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 PLGLAQ15195 96 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 SMIM3Q9BZL3 60 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 CCDC167Q9P0B6 97 aa-7.16□□□□□ -3.56
MIR548F3-201ENST00000408509 NRXN1Q9ULB1 1477 aa-7.17□□□□□ -3.56
MIR548F3-201ENST00000408509 MORN2Q502X0 79 aa-7.17□□□□□ -3.56
MIR548F3-201ENST00000408509 ATPIF1Q9UII2 106 aa-7.17□□□□□ -3.56
MIR548F3-201ENST00000408509 ATP6V1DQ9Y5K8 247 aa-7.17□□□□□ -3.56
MIR548F3-201ENST00000408509 FOCADQ5VW36 1801 aa-7.19□□□□□ -3.56
MIR548F3-201ENST00000408509 APOC2P02655 101 aa-7.19□□□□□ -3.56
MIR548F3-201ENST00000408509 ZNF720Q7Z2F6 126 aa-7.2□□□□□ -3.56
MIR548F3-201ENST00000408509 HOPXQ9BPY8 73 aaPredicted RBP-7.2□□□□□ -3.56
MIR548F3-201ENST00000408509 NHSQ6T4R5 1651 aa-7.21□□□□□ -3.56
MIR548F3-201ENST00000408509 NDUFB1O75438 58 aa-7.21□□□□□ -3.56
MIR548F3-201ENST00000408509 DEFB133Q30KQ1 61 aa-7.21□□□□□ -3.56
MIR548F3-201ENST00000408509 M0R2Z0 102 aa-7.22□□□□□ -3.57
MIR548F3-201ENST00000408509 KRTDAPP60985 99 aa-7.22□□□□□ -3.57
MIR548F3-201ENST00000408509 INO80Q9ULG1 1556 aaPredicted RBP-7.22□□□□□ -3.57
MIR548F3-201ENST00000408509 LINC00032P0C843 101 aa-7.23□□□□□ -3.57
MIR548F3-201ENST00000408509 MPC2O95563 127 aa-7.24□□□□□ -3.57
MIR548F3-201ENST00000408509 COPZ1P61923 177 aa-7.24□□□□□ -3.57
MIR548F3-201ENST00000408509 CCDC88BA6NC98 1476 aa-7.24□□□□□ -3.57
MIR548F3-201ENST00000408509 MYO5CQ9NQX4 1742 aa-7.25□□□□□ -3.57
MIR548F3-201ENST00000408509 ARFGEF2Q9Y6D5 1785 aa-7.26□□□□□ -3.57
MIR548F3-201ENST00000408509 DPY30Q9C005 99 aa-7.27□□□□□ -3.57
MIR548F3-201ENST00000408509 hADV29S1A0JD25 119 aa-7.28□□□□□ -3.57
MIR548F3-201ENST00000408509 FAM24AA6NFZ4 105 aa-7.28□□□□□ -3.57
MIR548F3-201ENST00000408509 S100GP29377 79 aa-7.28□□□□□ -3.57
MIR548F3-201ENST00000408509 CD52P31358 61 aa-7.28□□□□□ -3.57
MIR548F3-201ENST00000408509 RRBP1Q9P2E9 1410 aaKnown RBP-7.28□□□□□ -3.58
MIR548F3-201ENST00000408509 UTRNP46939 3433 aa-7.29□□□□□ -3.58
MIR548F3-201ENST00000408509 RNF17Q9BXT8 1623 aaKnown RBP-7.29□□□□□ -3.58
MIR548F3-201ENST00000408509 ATOX1O00244 68 aa-7.29□□□□□ -3.58
MIR548F3-201ENST00000408509 TPM3P06753 285 aa-7.29□□□□□ -3.58
MIR548F3-201ENST00000408509 UBL5Q9BZL1 73 aa-7.29□□□□□ -3.58
MIR548F3-201ENST00000408509 UMAD1C9J7I0 102 aa-7.3□□□□□ -3.58
MIR548F3-201ENST00000408509 TRIQKQ629K1 86 aa-7.3□□□□□ -3.58
MIR548F3-201ENST00000408509 KCNQ1DNQ9H478 68 aa-7.3□□□□□ -3.58
MIR548F3-201ENST00000408509 ARHGAP35Q9NRY4 1499 aa-7.3□□□□□ -3.58
MIR548F3-201ENST00000408509 SKA2Q8WVK7 121 aaPredicted RBP-7.31□□□□□ -3.58
MIR548F3-201ENST00000408509 HFM1A2PYH4 1435 aa-7.32□□□□□ -3.58
MIR548F3-201ENST00000408509 CTXN2P0C2S0 81 aa-7.32□□□□□ -3.58
MIR548F3-201ENST00000408509 PAIP2BQ9ULR5 123 aaKnown RBP-7.32□□□□□ -3.58
MIR548F3-201ENST00000408509 DR1Q01658 176 aa-7.33□□□□□ -3.58
MIR548F3-201ENST00000408509 RPS25P62851 125 aaKnown RBP-7.34□□□□□ -3.58
MIR548F3-201ENST00000408509 MEIG1Q5JSS6 88 aa-7.34□□□□□ -3.58
MIR548F3-201ENST00000408509 NAIPQ13075 1403 aa-7.35□□□□□ -3.59
MIR548F3-201ENST00000408509 ARHGAP5Q13017 1502 aa-7.35□□□□□ -3.59
MIR548F3-201ENST00000408509 PCBD2Q9H0N5 130 aa-7.35□□□□□ -3.59
MIR548F3-201ENST00000408509 GID8Q9NWU2 228 aa-7.35□□□□□ -3.59
MIR548F3-201ENST00000408509 SPANXCQ9NY87 97 aa-7.35□□□□□ -3.59
MIR548F3-201ENST00000408509 SMIM27A0A1W2PRY6 76 aa-7.37□□□□□ -3.59
MIR548F3-201ENST00000408509 WFDC10BQ8IUB3 73 aa-7.37□□□□□ -3.59
MIR548F3-201ENST00000408509 TSTD1Q8NFU3 115 aa-7.37□□□□□ -3.59
MIR548F3-201ENST00000408509 CCDC180Q9P1Z9 1646 aa-7.38□□□□□ -3.59
MIR548F3-201ENST00000408509 C3P01024 1663 aa-7.38□□□□□ -3.59
MIR548F3-201ENST00000408509 PFDN5Q99471 154 aa-7.38□□□□□ -3.59
MIR548F3-201ENST00000408509 LMO7Q8WWI1 1683 aa-7.38□□□□□ -3.59
MIR548F3-201ENST00000408509 KTN1Q86UP2 1357 aaKnown RBP-7.39□□□□□ -3.59
MIR548F3-201ENST00000408509 RBP2P50120 134 aa-7.41□□□□□ -3.6
MIR548F3-201ENST00000408509 LZICQ8WZA0 190 aa-7.41□□□□□ -3.6
MIR548F3-201ENST00000408509 SCRIBQ14160 1630 aa-7.41□□□□□ -3.6
MIR548F3-201ENST00000408509 FANCAO15360 1455 aa-7.42□□□□□ -3.6
MIR548F3-201ENST00000408509 ETDCA0A1B0GVM5 59 aa-7.43□□□□□ -3.6
MIR548F3-201ENST00000408509 NREPQ16612 68 aa-7.44□□□□□ -3.6
MIR548F3-201ENST00000408509 TTC37Q6PGP7 1564 aa-7.46□□□□□ -3.6
MIR548F3-201ENST00000408509 EPRSP07814 1512 aaKnown RBP-7.46□□□□□ -3.6
MIR548F3-201ENST00000408509 HMGN2P05204 90 aaKnown RBP-7.46□□□□□ -3.6
MIR548F3-201ENST00000408509 UNC13AQ9UPW8 1703 aa-7.47□□□□□ -3.6
MIR548F3-201ENST00000408509 EIF2AK4Q9P2K8 1649 aaKnown RBP-7.47□□□□□ -3.61
MIR548F3-201ENST00000408509 PMCHL2Q9BQD1 86 aa-7.47□□□□□ -3.61
MIR548F3-201ENST00000408509 HTN1P15515 57 aa-7.48□□□□□ -3.61
MIR548F3-201ENST00000408509 CKS1BP61024 79 aa-7.48□□□□□ -3.61
MIR548F3-201ENST00000408509 GLI2P10070 1586 aa-7.5□□□□□ -3.61
MIR548F3-201ENST00000408509 ARPC4P59998 168 aa-7.51□□□□□ -3.61
MIR548F3-201ENST00000408509 URB2Q14146 1524 aaKnown RBP-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 UQCRHLA0A096LP55 91 aa-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 C2orf88Q9BSF0 95 aa-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 RABAC1Q9UI14 185 aa-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 RALGAPBQ86X10 1494 aa-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 DIP2AQ14689 1571 aa-7.52□□□□□ -3.61
MIR548F3-201ENST00000408509 A0A1B0GV72 72 aa-7.53□□□□□ -3.61
MIR548F3-201ENST00000408509 MROH1Q8NDA8 1641 aa-7.53□□□□□ -3.62
MIR548F3-201ENST00000408509 VPS8Q8N3P4 1428 aa-7.53□□□□□ -3.62
MIR548F3-201ENST00000408509 FAM25AB3EWG3 89 aa-7.55□□□□□ -3.62
MIR548F3-201ENST00000408509 FAM25CB3EWG5 89 aa-7.55□□□□□ -3.62
MIR548F3-201ENST00000408509 FAM25GB3EWG6 89 aa-7.55□□□□□ -3.62
MIR548F3-201ENST00000408509 GNGT2O14610 69 aa-7.55□□□□□ -3.62
MIR548F3-201ENST00000408509 DEFB104AQ8WTQ1 72 aa-7.56□□□□□ -3.62
MIR548F3-201ENST00000408509 DDA1Q9BW61 102 aa-7.56□□□□□ -3.62
MIR548F3-201ENST00000408509 CLTCQ00610 1675 aaKnown RBP-7.57□□□□□ -3.62
MIR548F3-201ENST00000408509 CFAP43Q8NDM7 1665 aa-7.57□□□□□ -3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms