RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
R3HDM2-204ENST00000402412 PANO1I0J062 215 aa8.41□□□□□ -1.06
R3HDM2-204ENST00000402412 Q5XG85 94 aa8.4□□□□□ -1.06
R3HDM2-204ENST00000402412 HRES1P13985 223 aa8.39□□□□□ -1.07
R3HDM2-204ENST00000402412 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
R3HDM2-204ENST00000402412 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
R3HDM2-204ENST00000402412 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
R3HDM2-204ENST00000402412 OXTP01178 125 aa8.36□□□□□ -1.07
R3HDM2-204ENST00000402412 MMP24-AS1A0A0U1RRL7 71 aa8.34□□□□□ -1.07
R3HDM2-204ENST00000402412 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
R3HDM2-204ENST00000402412 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
R3HDM2-204ENST00000402412 SPRR1AP35321 89 aa8.31□□□□□ -1.08
R3HDM2-204ENST00000402412 KRTAP10-2P60368 255 aa8.3□□□□□ -1.08
R3HDM2-204ENST00000402412 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
R3HDM2-204ENST00000402412 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
R3HDM2-204ENST00000402412 LINC00472Q9H8W2 130 aa8.27□□□□□ -1.09
R3HDM2-204ENST00000402412 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
R3HDM2-204ENST00000402412 A0A0A0MQY5 61 aa8.24□□□□□ -1.09
R3HDM2-204ENST00000402412 SPINK7P58062 85 aa8.24□□□□□ -1.09
R3HDM2-204ENST00000402412 Q1T7F1 81 aa8.23□□□□□ -1.09
R3HDM2-204ENST00000402412 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
R3HDM2-204ENST00000402412 KRTAP10-1P60331 282 aa8.22□□□□□ -1.09
R3HDM2-204ENST00000402412 A0A087X002 238 aa8.22□□□□□ -1.09
R3HDM2-204ENST00000402412 NOTCH2NLQ7Z3S9 236 aa8.22□□□□□ -1.09
R3HDM2-204ENST00000402412 Q5W150 140 aa8.19□□□□□ -1.1
R3HDM2-204ENST00000402412 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
R3HDM2-204ENST00000402412 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
R3HDM2-204ENST00000402412 A0A1B0GU33 70 aa8.19□□□□□ -1.1
R3HDM2-204ENST00000402412 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
R3HDM2-204ENST00000402412 Q6ZSA8 131 aa8.18□□□□□ -1.1
R3HDM2-204ENST00000402412 Q5VV11 94 aa8.15□□□□□ -1.1
R3HDM2-204ENST00000402412 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
R3HDM2-204ENST00000402412 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
R3HDM2-204ENST00000402412 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
R3HDM2-204ENST00000402412 SPRR1BP22528 89 aa8.08□□□□□ -1.12
R3HDM2-204ENST00000402412 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
R3HDM2-204ENST00000402412 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
R3HDM2-204ENST00000402412 M0R2T5 61 aa8.07□□□□□ -1.12
R3HDM2-204ENST00000402412 COL7A1Q02388 2944 aa8.07□□□□□ -1.12
R3HDM2-204ENST00000402412 Q75L30 129 aa8.06□□□□□ -1.12
R3HDM2-204ENST00000402412 LINC01558Q9Y6Z2 57 aa8.06□□□□□ -1.12
R3HDM2-204ENST00000402412 A8MU10 97 aa8.05□□□□□ -1.12
R3HDM2-204ENST00000402412 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
R3HDM2-204ENST00000402412 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
R3HDM2-204ENST00000402412 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
R3HDM2-204ENST00000402412 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
R3HDM2-204ENST00000402412 Q5VSD8 79 aa7.97□□□□□ -1.13
R3HDM2-204ENST00000402412 ANK2Q01484 3957 aa7.97□□□□□ -1.13
R3HDM2-204ENST00000402412 CMYA5Q8N3K9 4069 aa7.95□□□□□ -1.14
R3HDM2-204ENST00000402412 R4GN34 69 aa7.92□□□□□ -1.14
R3HDM2-204ENST00000402412 DNAH3Q8TD57 4116 aa7.91□□□□□ -1.14
R3HDM2-204ENST00000402412 Q6ZR54 194 aa7.91□□□□□ -1.14
R3HDM2-204ENST00000402412 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
R3HDM2-204ENST00000402412 S4R3F8 94 aa7.89□□□□□ -1.15
R3HDM2-204ENST00000402412 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
R3HDM2-204ENST00000402412 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
R3HDM2-204ENST00000402412 LCE6AA0A183 80 aa7.83□□□□□ -1.16
R3HDM2-204ENST00000402412 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
R3HDM2-204ENST00000402412 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
R3HDM2-204ENST00000402412 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
R3HDM2-204ENST00000402412 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
R3HDM2-204ENST00000402412 M0QZ58 72 aa7.8□□□□□ -1.16
R3HDM2-204ENST00000402412 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
R3HDM2-204ENST00000402412 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
R3HDM2-204ENST00000402412 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
R3HDM2-204ENST00000402412 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
R3HDM2-204ENST00000402412 A6NN06 94 aa7.71□□□□□ -1.18
R3HDM2-204ENST00000402412 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
R3HDM2-204ENST00000402412 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
R3HDM2-204ENST00000402412 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
R3HDM2-204ENST00000402412 ROMO1P60602 79 aa7.63□□□□□ -1.19
R3HDM2-204ENST00000402412 PRKDCP78527 4128 aaKnown RBP7.63□□□□□ -1.19
R3HDM2-204ENST00000402412 PLECQ15149 4684 aaKnown RBP7.57□□□□□ -1.2
R3HDM2-204ENST00000402412 KRTAP25-1Q3LHN0 102 aa7.54□□□□□ -1.2
R3HDM2-204ENST00000402412 DYNC2H1Q8NCM8 4307 aaKnown RBP7.51□□□□□ -1.21
R3HDM2-204ENST00000402412 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
R3HDM2-204ENST00000402412 A8MUU9 505 aa7.49□□□□□ -1.21
R3HDM2-204ENST00000402412 VPS13DQ5THJ4 4388 aa7.48□□□□□ -1.21
R3HDM2-204ENST00000402412 C20orf166-AS1Q96NR2 134 aa7.45□□□□□ -1.22
R3HDM2-204ENST00000402412 CSMD3Q7Z407 3707 aa7.44□□□□□ -1.22
R3HDM2-204ENST00000402412 DNAH7Q8WXX0 4024 aa7.43□□□□□ -1.22
R3HDM2-204ENST00000402412 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
R3HDM2-204ENST00000402412 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
R3HDM2-204ENST00000402412 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.23
R3HDM2-204ENST00000402412 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.23
R3HDM2-204ENST00000402412 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
R3HDM2-204ENST00000402412 LYSTQ99698 3801 aa7.38□□□□□ -1.23
R3HDM2-204ENST00000402412 A0A1B0GVY2 172 aa7.36□□□□□ -1.23
R3HDM2-204ENST00000402412 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
R3HDM2-204ENST00000402412 KMT2AQ03164 3969 aa7.29□□□□□ -1.24
R3HDM2-204ENST00000402412 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
R3HDM2-204ENST00000402412 DNAH6Q9C0G6 4158 aa7.24□□□□□ -1.25
R3HDM2-204ENST00000402412 XP32Q5T750 250 aa7.23□□□□□ -1.25
R3HDM2-204ENST00000402412 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
R3HDM2-204ENST00000402412 H0YAA0 97 aa7.22□□□□□ -1.25
R3HDM2-204ENST00000402412 DNAH2Q9P225 4427 aa7.21□□□□□ -1.26
R3HDM2-204ENST00000402412 P0C880 135 aa7.2□□□□□ -1.26
R3HDM2-204ENST00000402412 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
R3HDM2-204ENST00000402412 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
R3HDM2-204ENST00000402412 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms