RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 AKAP9Q99996 3911 aa-0.53□□□□□ -2.49
CBX3P9-201ENST00000402326 KALRNO60229 2985 aa-0.53□□□□□ -2.49
CBX3P9-201ENST00000402326 APOBP04114 4563 aaKnown RBP-0.53□□□□□ -2.49
CBX3P9-201ENST00000402326 SPRR2FQ96RM1 72 aa-0.53□□□□□ -2.49
CBX3P9-201ENST00000402326 TLN1Q9Y490 2541 aaKnown RBP-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 SACSQ9NZJ4 4579 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 VPS13DQ5THJ4 4388 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 IAPPP10997 89 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 BVES-AS1Q5T3Y7 98 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 ACACAQ13085 2346 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 KDM5DQ9BY66 1539 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 CMYA5Q8N3K9 4069 aa-0.54□□□□□ -2.5
CBX3P9-201ENST00000402326 LYNX1G3V0Z9 82 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 DEFB130AP0DP74 79 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 VPS13BQ7Z7G8 4022 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 ITSN1Q15811 1721 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
CBX3P9-201ENST00000402326 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 PRUNE2Q8WUY3 3088 aa-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 C9orf92A6NGG3 77 aa-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 MT1AP04731 61 aa-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 HMGA1P17096 107 aaKnown RBP-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 ABCC1P33527 1531 aa-0.56□□□□□ -2.5
CBX3P9-201ENST00000402326 TLN2Q9Y4G6 2542 aa-0.57□□□□□ -2.5
CBX3P9-201ENST00000402326 ADGRG4Q8IZF6 3080 aa-0.57□□□□□ -2.5
CBX3P9-201ENST00000402326 TJP1Q07157 1748 aa-0.57□□□□□ -2.5
CBX3P9-201ENST00000402326 PRLHP81277 87 aa-0.57□□□□□ -2.5
CBX3P9-201ENST00000402326 CFAP74Q9C0B2 1584 aa-0.57□□□□□ -2.5
CBX3P9-201ENST00000402326 MAP3K1Q13233 1512 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 DNAH5Q8TE73 4624 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 TRRAPQ9Y4A5 3859 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 ARHGAP35Q9NRY4 1499 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 SMG1Q96Q15 3661 aaKnown RBP-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 MT1HL1P0DM35 61 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 LRBAP50851 2863 aa-0.58□□□□□ -2.5
CBX3P9-201ENST00000402326 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 RELNP78509 3460 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 CD163L1Q9NR16 1453 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 TRIOO75962 3097 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 ATMQ13315 3056 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 SPENQ96T58 3664 aaKnown RBP-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 DEFB131BA0A096LNP1 70 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 DEFB106AQ8N104 65 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 CENPEQ02224 2701 aa-0.59□□□□□ -2.5
CBX3P9-201ENST00000402326 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.6□□□□□ -2.5
CBX3P9-201ENST00000402326 FRYQ5TBA9 3013 aa-0.6□□□□□ -2.51
CBX3P9-201ENST00000402326 HFM1A2PYH4 1435 aa-0.6□□□□□ -2.51
CBX3P9-201ENST00000402326 C18orf32Q8TCD1 76 aa-0.6□□□□□ -2.51
CBX3P9-201ENST00000402326 S4R3F8 94 aa-0.6□□□□□ -2.51
CBX3P9-201ENST00000402326 ZC3H13Q5T200 1668 aaKnown RBP-0.6□□□□□ -2.51
CBX3P9-201ENST00000402326 SPTAN1Q13813 2472 aaKnown RBP-0.61□□□□□ -2.51
CBX3P9-201ENST00000402326 CRYBG3Q68DQ2 2970 aa-0.61□□□□□ -2.51
CBX3P9-201ENST00000402326 LMTK2Q8IWU2 1503 aa-0.61□□□□□ -2.51
CBX3P9-201ENST00000402326 RNF17Q9BXT8 1623 aaKnown RBP-0.61□□□□□ -2.51
CBX3P9-201ENST00000402326 RALGAPBQ86X10 1494 aa-0.61□□□□□ -2.51
CBX3P9-201ENST00000402326 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 MRPL33O75394 65 aaKnown RBP-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 UBL5Q9BZL1 73 aa-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 KCNQ1DNQ9H478 68 aa-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 ZFHX4Q86UP3 3567 aa-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 ANKRD36CQ5JPF3 1778 aa-0.62□□□□□ -2.51
CBX3P9-201ENST00000402326 RRBP1Q9P2E9 1410 aaKnown RBP-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 CSMD2Q7Z408 3487 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 CEP290O15078 2479 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 H3BVH4 76 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 CRIP1P50238 77 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 ENHOQ6UWT2 76 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 ABCA8O94911 1581 aa-0.63□□□□□ -2.51
CBX3P9-201ENST00000402326 DNAH17Q9UFH2 4485 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 KIAA0586Q9BVV6 1533 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 NRAPQ86VF7 1730 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 FREM2Q5SZK8 3169 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 MT1BP07438 61 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 ANKARQ7Z5J8 1434 aa-0.64□□□□□ -2.51
CBX3P9-201ENST00000402326 CSMD1Q96PZ7 3565 aa-0.65□□□□□ -2.51
CBX3P9-201ENST00000402326 MGAQ8IWI9 3026 aa-0.65□□□□□ -2.51
CBX3P9-201ENST00000402326 PARP4Q9UKK3 1724 aaKnown RBP-0.65□□□□□ -2.51
CBX3P9-201ENST00000402326 ITSN2Q9NZM3 1697 aa-0.65□□□□□ -2.51
CBX3P9-201ENST00000402326 DNAH11Q96DT5 4516 aa-0.66□□□□□ -2.51
CBX3P9-201ENST00000402326 DEFB110Q30KQ9 67 aa-0.66□□□□□ -2.52
CBX3P9-201ENST00000402326 LOC400499M0QZD8 3231 aa-0.66□□□□□ -2.52
CBX3P9-201ENST00000402326 C5orf42Q9H799 3197 aa-0.67□□□□□ -2.52
CBX3P9-201ENST00000402326 NHSQ6T4R5 1651 aa-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 ETDCA0A1B0GVM5 59 aa-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 MT1HP80294 61 aa-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 DIP2AQ14689 1571 aa-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 MYO5CQ9NQX4 1742 aa-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 INO80Q9ULG1 1556 aaPredicted RBP-0.68□□□□□ -2.52
CBX3P9-201ENST00000402326 CEP350Q5VT06 3117 aa-0.69□□□□□ -2.52
CBX3P9-201ENST00000402326 DMDP11532 3685 aa-0.69□□□□□ -2.52
CBX3P9-201ENST00000402326 SPEGQ15772 3267 aa-0.69□□□□□ -2.52
CBX3P9-201ENST00000402326 IQGAP3Q86VI3 1631 aa-0.69□□□□□ -2.52
CBX3P9-201ENST00000402326 LRRIQ1Q96JM4 1722 aa-0.69□□□□□ -2.52
CBX3P9-201ENST00000402326 EP400Q96L91 3159 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 RPS27P42677 84 aaKnown RBP-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 MT1XP80297 61 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 WT1-ASQ06250 92 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 MINOS1Q5TGZ0 78 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 RPS27LQ71UM5 84 aaKnown RBP-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms