RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 SPAG11AQ6PDA7 123 aa4.99□□□□□ -1.61
TCF4-203ENST00000398339 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
TCF4-203ENST00000398339 NOTCH2NLQ7Z3S9 236 aa4.98□□□□□ -1.61
TCF4-203ENST00000398339 DNAH9Q9NYC9 4486 aa4.97□□□□□ -1.61
TCF4-203ENST00000398339 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
TCF4-203ENST00000398339 PANO1I0J062 215 aa4.97□□□□□ -1.61
TCF4-203ENST00000398339 HRES1P13985 223 aa4.97□□□□□ -1.61
TCF4-203ENST00000398339 UBE2DNLQ8IWF7 75 aa4.97□□□□□ -1.61
TCF4-203ENST00000398339 K7EIL1 84 aa4.96□□□□□ -1.62
TCF4-203ENST00000398339 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
TCF4-203ENST00000398339 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
TCF4-203ENST00000398339 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
TCF4-203ENST00000398339 TENM2Q9NT68 2774 aa4.95□□□□□ -1.62
TCF4-203ENST00000398339 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
TCF4-203ENST00000398339 APLNQ9ULZ1 77 aa4.94□□□□□ -1.62
TCF4-203ENST00000398339 LYSTQ99698 3801 aa4.93□□□□□ -1.62
TCF4-203ENST00000398339 WWC2-AS2Q96NR7 200 aa4.92□□□□□ -1.62
TCF4-203ENST00000398339 SPACA4Q8TDM5 124 aa4.91□□□□□ -1.62
TCF4-203ENST00000398339 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
TCF4-203ENST00000398339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
TCF4-203ENST00000398339 P0C880 135 aa4.9□□□□□ -1.62
TCF4-203ENST00000398339 NBDYA0A0U1RRE5 68 aa4.89□□□□□ -1.63
TCF4-203ENST00000398339 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
TCF4-203ENST00000398339 DYNC2H1Q8NCM8 4307 aaKnown RBP4.88□□□□□ -1.63
TCF4-203ENST00000398339 KRTAP13-3Q3SY46 172 aa4.88□□□□□ -1.63
TCF4-203ENST00000398339 Q5W150 140 aa4.88□□□□□ -1.63
TCF4-203ENST00000398339 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
TCF4-203ENST00000398339 KRTAP16-1A8MUX0 517 aa4.87□□□□□ -1.63
TCF4-203ENST00000398339 PSORS1C2Q9UIG4 136 aa4.86□□□□□ -1.63
TCF4-203ENST00000398339 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
TCF4-203ENST00000398339 ACYP2P14621 99 aa4.85□□□□□ -1.63
TCF4-203ENST00000398339 STAB2Q8WWQ8 2551 aa4.85□□□□□ -1.63
TCF4-203ENST00000398339 SPINK6Q6UWN8 80 aa4.85□□□□□ -1.63
TCF4-203ENST00000398339 CSMD3Q7Z407 3707 aa4.85□□□□□ -1.63
TCF4-203ENST00000398339 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
TCF4-203ENST00000398339 ZNF861PO60384 105 aa4.84□□□□□ -1.63
TCF4-203ENST00000398339 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.64
TCF4-203ENST00000398339 ALMS1Q8TCU4 4167 aa4.84□□□□□ -1.64
TCF4-203ENST00000398339 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
TCF4-203ENST00000398339 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
TCF4-203ENST00000398339 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
TCF4-203ENST00000398339 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
TCF4-203ENST00000398339 A0A087WTM6 91 aa4.81□□□□□ -1.64
TCF4-203ENST00000398339 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
TCF4-203ENST00000398339 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
TCF4-203ENST00000398339 CIRBP-AS1Q8TBR5 109 aa4.79□□□□□ -1.64
TCF4-203ENST00000398339 MGAM2Q2M2H8 2515 aa4.79□□□□□ -1.64
TCF4-203ENST00000398339 LCE2BO14633 110 aa4.79□□□□□ -1.64
TCF4-203ENST00000398339 NUPR2A6NF83 97 aa4.78□□□□□ -1.64
TCF4-203ENST00000398339 A0A1B0GU69 56 aa4.77□□□□□ -1.65
TCF4-203ENST00000398339 VPS13DQ5THJ4 4388 aa4.77□□□□□ -1.65
TCF4-203ENST00000398339 DNAH17Q9UFH2 4485 aa4.77□□□□□ -1.65
TCF4-203ENST00000398339 FAM229AH3BQW9 127 aa4.77□□□□□ -1.65
TCF4-203ENST00000398339 IGLV7-43P04211 117 aa4.76□□□□□ -1.65
TCF4-203ENST00000398339 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
TCF4-203ENST00000398339 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
TCF4-203ENST00000398339 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
TCF4-203ENST00000398339 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
TCF4-203ENST00000398339 TGP01266 2768 aa4.74□□□□□ -1.65
TCF4-203ENST00000398339 SEC61BP60468 96 aaKnown RBP4.74□□□□□ -1.65
TCF4-203ENST00000398339 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
TCF4-203ENST00000398339 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
TCF4-203ENST00000398339 A8MUU9 505 aa4.72□□□□□ -1.65
TCF4-203ENST00000398339 UQCR11O14957 56 aa4.71□□□□□ -1.66
TCF4-203ENST00000398339 DNAH2Q9P225 4427 aa4.7□□□□□ -1.66
TCF4-203ENST00000398339 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
TCF4-203ENST00000398339 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
TCF4-203ENST00000398339 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
TCF4-203ENST00000398339 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
TCF4-203ENST00000398339 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
TCF4-203ENST00000398339 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
TCF4-203ENST00000398339 KMT2AQ03164 3969 aa4.62□□□□□ -1.67
TCF4-203ENST00000398339 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
TCF4-203ENST00000398339 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
TCF4-203ENST00000398339 KMT2CQ8NEZ4 4911 aaKnown RBP4.6□□□□□ -1.67
TCF4-203ENST00000398339 K7ERS5 55 aa4.59□□□□□ -1.67
TCF4-203ENST00000398339 SPINK1P00995 79 aa4.59□□□□□ -1.67
TCF4-203ENST00000398339 KRTAP1-4P0C5Y4 121 aa4.59□□□□□ -1.68
TCF4-203ENST00000398339 KRTAP10-2P60368 255 aa4.59□□□□□ -1.68
TCF4-203ENST00000398339 Q8N1X5 172 aa4.58□□□□□ -1.68
TCF4-203ENST00000398339 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
TCF4-203ENST00000398339 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
TCF4-203ENST00000398339 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
TCF4-203ENST00000398339 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
TCF4-203ENST00000398339 LRP1BQ9NZR2 4599 aa4.56□□□□□ -1.68
TCF4-203ENST00000398339 LY6G6CO95867 125 aa4.55□□□□□ -1.68
TCF4-203ENST00000398339 RYR3Q15413 4870 aa4.55□□□□□ -1.68
TCF4-203ENST00000398339 Q6ZSA8 131 aa4.55□□□□□ -1.68
TCF4-203ENST00000398339 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
TCF4-203ENST00000398339 H0YAA0 97 aa4.52□□□□□ -1.69
TCF4-203ENST00000398339 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
TCF4-203ENST00000398339 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
TCF4-203ENST00000398339 A0A1B0GU33 70 aa4.48□□□□□ -1.69
TCF4-203ENST00000398339 PKD1P98161 4303 aa4.47□□□□□ -1.69
TCF4-203ENST00000398339 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
TCF4-203ENST00000398339 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
TCF4-203ENST00000398339 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
TCF4-203ENST00000398339 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
TCF4-203ENST00000398339 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
TCF4-203ENST00000398339 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms