RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 A0A1B0GW54 56 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 SSBP3-AS1Q7Z2R9 100 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 C1orf64Q8NEQ6 169 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 LINC01547P58512 204 aaPredicted RBP2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 XAGE1AQ9HD64 81 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 EIF4EBP3O60516 100 aaPredicted RBP2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 C6orf48Q9UBA6 75 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 ASB16-AS1Q495Z4 193 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 Q6ZQY7 126 aa2.31□□□□□ -2.04
FNDC3A-202ENST00000398316 IGLV5-48A0A075B6I7 105 aa2.3□□□□□ -2.04
FNDC3A-202ENST00000398316 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
FNDC3A-202ENST00000398316 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
FNDC3A-202ENST00000398316 A0A087WYN8 130 aa2.3□□□□□ -2.04
FNDC3A-202ENST00000398316 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
FNDC3A-202ENST00000398316 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 FLG2Q5D862 2391 aaPredicted RBP2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 IGKV2D-30A0A075B6S6 120 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 IGKV2-30P06310 120 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 PCOTHQ58A44 107 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 CSAG1Q6PB30 78 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 SEC61BP60468 96 aaKnown RBP2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 C9orf129Q5T035 196 aaKnown RBP2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
FNDC3A-202ENST00000398316 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 DEFB116Q30KQ4 102 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 CDC42SE1Q9NRR8 79 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 LOC101927531A0A1B0GV80 90 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 LINC00575Q6W349 94 aa2.28□□□□□ -2.04
FNDC3A-202ENST00000398316 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.05
FNDC3A-202ENST00000398316 LINC00308Q8TCZ7 52 aa2.28□□□□□ -2.05
FNDC3A-202ENST00000398316 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 Q1T7F1 81 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 Q8N1X5 172 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 Q96NJ1 140 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 Q9BRP9 147 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 A0A1B0GU69 56 aa2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 LCE2DQ5TA82 110 aaPredicted RBP2.27□□□□□ -2.05
FNDC3A-202ENST00000398316 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 SMIM29Q86T20 159 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 Q8NDZ9 215 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 SMIM11BQ8TCY0 68 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 MOBPQ13875 183 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
FNDC3A-202ENST00000398316 Q8NBF4 154 aa2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 A8MU10 97 aa2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 H0Y9P7 68 aa2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 BCE1O60756 84 aa2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 PHF5AQ7RTV0 110 aaKnown RBP2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 CRIPTQ9P021 101 aa2.25□□□□□ -2.05
FNDC3A-202ENST00000398316 ZNF861PO60384 105 aa2.24□□□□□ -2.05
FNDC3A-202ENST00000398316 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
FNDC3A-202ENST00000398316 KRTAP29-1A8MX34 341 aaPredicted RBP2.24□□□□□ -2.05
FNDC3A-202ENST00000398316 Q5VV11 94 aa2.24□□□□□ -2.05
FNDC3A-202ENST00000398316 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 FAM218AQ96MZ4 157 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 IGLV7-46A0A075B6I9 117 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 COA5Q86WW8 74 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 KRTAP10-8P60410 259 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 KRTAP10-1P60331 282 aa2.23□□□□□ -2.05
FNDC3A-202ENST00000398316 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 KRTAP10-2P60368 255 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 Q6ZRX8 168 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 Q6ZQT0 140 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 A8MWP4 228 aa2.22□□□□□ -2.05
FNDC3A-202ENST00000398316 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
FNDC3A-202ENST00000398316 A6NN06 94 aa2.21□□□□□ -2.06
FNDC3A-202ENST00000398316 Q75L30 129 aa2.21□□□□□ -2.06
FNDC3A-202ENST00000398316 C8orf17Q9NRJ1 99 aa2.21□□□□□ -2.06
FNDC3A-202ENST00000398316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.21□□□□□ -2.06
FNDC3A-202ENST00000398316 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 TP53AIP1Q9HCN2 124 aa2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 SRRM2Q9UQ35 2752 aaKnown RBP2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 PANO1I0J062 215 aa2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 C9orf92A6NGG3 77 aa2.2□□□□□ -2.06
FNDC3A-202ENST00000398316 KRTAP11-1Q8IUC1 163 aa2.19□□□□□ -2.06
FNDC3A-202ENST00000398316 TRBV7-4A0A0J9YYF1 115 aa2.19□□□□□ -2.06
FNDC3A-202ENST00000398316 SPINK7P58062 85 aa2.19□□□□□ -2.06
FNDC3A-202ENST00000398316 UQCR11O14957 56 aa2.19□□□□□ -2.06
FNDC3A-202ENST00000398316 MT1HL1P0DM35 61 aa2.18□□□□□ -2.06
FNDC3A-202ENST00000398316 Q8N9P0 234 aaPredicted RBP2.18□□□□□ -2.06
FNDC3A-202ENST00000398316 KIAA1109Q2LD37 5005 aa2.17□□□□□ -2.06
FNDC3A-202ENST00000398316 H3BPC8 53 aa2.17□□□□□ -2.06
FNDC3A-202ENST00000398316 ROMO1P60602 79 aa2.17□□□□□ -2.06
FNDC3A-202ENST00000398316 A0A087WSZ3 146 aa2.16□□□□□ -2.06
FNDC3A-202ENST00000398316 KRTAP4-5Q9BYR2 181 aa2.15□□□□□ -2.06
FNDC3A-202ENST00000398316 PCLOQ9Y6V0 5065 aa2.15□□□□□ -2.06
FNDC3A-202ENST00000398316 ST20-AS1Q8NBB2 130 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms