RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
CYTH3-202ENST00000396741 PLAC8Q9NZF1 115 aa8.97□□□□□ -0.97
CYTH3-202ENST00000396741 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
CYTH3-202ENST00000396741 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
CYTH3-202ENST00000396741 SPRR1BP22528 89 aa8.94□□□□□ -0.98
CYTH3-202ENST00000396741 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
CYTH3-202ENST00000396741 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
CYTH3-202ENST00000396741 TENM2Q9NT68 2774 aa8.91□□□□□ -0.98
CYTH3-202ENST00000396741 TGP01266 2768 aa8.91□□□□□ -0.98
CYTH3-202ENST00000396741 Q75L30 129 aa8.89□□□□□ -0.99
CYTH3-202ENST00000396741 HRES1P13985 223 aa8.88□□□□□ -0.99
CYTH3-202ENST00000396741 IGLV7-46A0A075B6I9 117 aa8.88□□□□□ -0.99
CYTH3-202ENST00000396741 VPS13CQ709C8 3753 aa8.87□□□□□ -0.99
CYTH3-202ENST00000396741 PRAC1Q96KF2 57 aa8.86□□□□□ -0.99
CYTH3-202ENST00000396741 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
CYTH3-202ENST00000396741 Q5VV11 94 aa8.81□□□□□ -1
CYTH3-202ENST00000396741 A0A087X002 238 aa8.79□□□□□ -1
CYTH3-202ENST00000396741 NOTCH2NLQ7Z3S9 236 aa8.79□□□□□ -1
CYTH3-202ENST00000396741 Q6ZR54 194 aa8.76□□□□□ -1.01
CYTH3-202ENST00000396741 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
CYTH3-202ENST00000396741 Q5W150 140 aa8.75□□□□□ -1.01
CYTH3-202ENST00000396741 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
CYTH3-202ENST00000396741 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
CYTH3-202ENST00000396741 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
CYTH3-202ENST00000396741 J3QL48 77 aa8.73□□□□□ -1.01
CYTH3-202ENST00000396741 A0A0D9SG42 100 aa8.71□□□□□ -1.01
CYTH3-202ENST00000396741 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
CYTH3-202ENST00000396741 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
CYTH3-202ENST00000396741 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
CYTH3-202ENST00000396741 SPINK7P58062 85 aa8.66□□□□□ -1.02
CYTH3-202ENST00000396741 ZCCHC13Q8WW36 166 aaKnown RBP8.66□□□□□ -1.02
CYTH3-202ENST00000396741 TRRAPQ9Y4A5 3859 aa8.63□□□□□ -1.03
CYTH3-202ENST00000396741 AKAP9Q99996 3911 aa8.63□□□□□ -1.03
CYTH3-202ENST00000396741 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
CYTH3-202ENST00000396741 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
CYTH3-202ENST00000396741 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
CYTH3-202ENST00000396741 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
CYTH3-202ENST00000396741 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
CYTH3-202ENST00000396741 A6NN06 94 aa8.57□□□□□ -1.04
CYTH3-202ENST00000396741 A0A1B0GU33 70 aa8.54□□□□□ -1.04
CYTH3-202ENST00000396741 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
CYTH3-202ENST00000396741 LCE6AA0A183 80 aa8.52□□□□□ -1.04
CYTH3-202ENST00000396741 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
CYTH3-202ENST00000396741 Q6ZSA8 131 aa8.5□□□□□ -1.05
CYTH3-202ENST00000396741 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
CYTH3-202ENST00000396741 Q5VSD8 79 aa8.48□□□□□ -1.05
CYTH3-202ENST00000396741 LUZP6Q538Z0 58 aa8.46□□□□□ -1.05
CYTH3-202ENST00000396741 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.05
CYTH3-202ENST00000396741 A8MU10 97 aa8.45□□□□□ -1.06
CYTH3-202ENST00000396741 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
CYTH3-202ENST00000396741 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
CYTH3-202ENST00000396741 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
CYTH3-202ENST00000396741 S4R3F8 94 aa8.3□□□□□ -1.08
CYTH3-202ENST00000396741 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
CYTH3-202ENST00000396741 ROMO1P60602 79 aa8.23□□□□□ -1.09
CYTH3-202ENST00000396741 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
CYTH3-202ENST00000396741 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
CYTH3-202ENST00000396741 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
CYTH3-202ENST00000396741 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
CYTH3-202ENST00000396741 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
CYTH3-202ENST00000396741 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
CYTH3-202ENST00000396741 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
CYTH3-202ENST00000396741 R4GN34 69 aa8.15□□□□□ -1.1
CYTH3-202ENST00000396741 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
CYTH3-202ENST00000396741 M0R2T5 61 aa8.12□□□□□ -1.11
CYTH3-202ENST00000396741 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
CYTH3-202ENST00000396741 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
CYTH3-202ENST00000396741 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CYTH3-202ENST00000396741 M0QZ58 72 aa8.05□□□□□ -1.12
CYTH3-202ENST00000396741 CMYA5Q8N3K9 4069 aa8.04□□□□□ -1.12
CYTH3-202ENST00000396741 A8MUU9 505 aa7.99□□□□□ -1.13
CYTH3-202ENST00000396741 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.13
CYTH3-202ENST00000396741 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
CYTH3-202ENST00000396741 ANK2Q01484 3957 aa7.96□□□□□ -1.14
CYTH3-202ENST00000396741 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
CYTH3-202ENST00000396741 XP32Q5T750 250 aa7.83□□□□□ -1.16
CYTH3-202ENST00000396741 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
CYTH3-202ENST00000396741 DYNC2H1Q8NCM8 4307 aaKnown RBP7.79□□□□□ -1.16
CYTH3-202ENST00000396741 H0YAA0 97 aa7.74□□□□□ -1.17
CYTH3-202ENST00000396741 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
CYTH3-202ENST00000396741 A0A1B0GVY2 172 aa7.65□□□□□ -1.18
CYTH3-202ENST00000396741 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
CYTH3-202ENST00000396741 LYSTQ99698 3801 aa7.64□□□□□ -1.19
CYTH3-202ENST00000396741 P0C880 135 aa7.63□□□□□ -1.19
CYTH3-202ENST00000396741 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
CYTH3-202ENST00000396741 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
CYTH3-202ENST00000396741 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
CYTH3-202ENST00000396741 TPRXLQ17RH7 258 aa7.51□□□□□ -1.21
CYTH3-202ENST00000396741 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
CYTH3-202ENST00000396741 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
CYTH3-202ENST00000396741 DNAH6Q9C0G6 4158 aa7.47□□□□□ -1.21
CYTH3-202ENST00000396741 DNHD1Q96M86 4753 aa7.45□□□□□ -1.22
CYTH3-202ENST00000396741 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
CYTH3-202ENST00000396741 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
CYTH3-202ENST00000396741 PLECQ15149 4684 aaKnown RBP7.38□□□□□ -1.23
CYTH3-202ENST00000396741 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
CYTH3-202ENST00000396741 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
CYTH3-202ENST00000396741 TNP1P09430 55 aa7.31□□□□□ -1.24
CYTH3-202ENST00000396741 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
CYTH3-202ENST00000396741 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms