RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 A0A1B0GU69 56 aa11.25□□□□□ -0.61
HOXC6-202ENST00000394331 KRTAP13-3Q3SY46 172 aa11.25□□□□□ -0.61
HOXC6-202ENST00000394331 DNAH10Q8IVF4 4471 aa11.25□□□□□ -0.61
HOXC6-202ENST00000394331 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
HOXC6-202ENST00000394331 IGHV6-1A0A0B4J1U7 121 aa11.24□□□□□ -0.61
HOXC6-202ENST00000394331 RETNLBQ9BQ08 111 aa11.24□□□□□ -0.61
HOXC6-202ENST00000394331 DNAH9Q9NYC9 4486 aa11.23□□□□□ -0.61
HOXC6-202ENST00000394331 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
HOXC6-202ENST00000394331 PANO1I0J062 215 aa11.22□□□□□ -0.61
HOXC6-202ENST00000394331 MIR22HGQ0VDD5 57 aa11.21□□□□□ -0.61
HOXC6-202ENST00000394331 CDK2AP2O75956 126 aa11.21□□□□□ -0.62
HOXC6-202ENST00000394331 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
HOXC6-202ENST00000394331 UQCR11O14957 56 aa11.2□□□□□ -0.62
HOXC6-202ENST00000394331 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
HOXC6-202ENST00000394331 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
HOXC6-202ENST00000394331 LYSTQ99698 3801 aa11.16□□□□□ -0.62
HOXC6-202ENST00000394331 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
HOXC6-202ENST00000394331 A0A087WTM6 91 aa11.14□□□□□ -0.63
HOXC6-202ENST00000394331 CSAG1Q6PB30 78 aa11.14□□□□□ -0.63
HOXC6-202ENST00000394331 Q5W150 140 aa11.13□□□□□ -0.63
HOXC6-202ENST00000394331 LINC00483Q53H64 154 aa11.13□□□□□ -0.63
HOXC6-202ENST00000394331 NOTCH2NLQ7Z3S9 236 aa11.1□□□□□ -0.63
HOXC6-202ENST00000394331 ZNF706Q9Y5V0 76 aaPredicted RBP11.09□□□□□ -0.63
HOXC6-202ENST00000394331 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
HOXC6-202ENST00000394331 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
HOXC6-202ENST00000394331 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
HOXC6-202ENST00000394331 IGLV5-52A0A0A0MRZ9 124 aa11.03□□□□□ -0.64
HOXC6-202ENST00000394331 ZNF861PO60384 105 aa11.03□□□□□ -0.64
HOXC6-202ENST00000394331 DNAH7Q8WXX0 4024 aa11.02□□□□□ -0.64
HOXC6-202ENST00000394331 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.64
HOXC6-202ENST00000394331 SRRM2Q9UQ35 2752 aaKnown RBP11.02□□□□□ -0.65
HOXC6-202ENST00000394331 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
HOXC6-202ENST00000394331 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
HOXC6-202ENST00000394331 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
HOXC6-202ENST00000394331 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
HOXC6-202ENST00000394331 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
HOXC6-202ENST00000394331 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
HOXC6-202ENST00000394331 ANAPC11Q9NYG5 84 aa10.89□□□□□ -0.67
HOXC6-202ENST00000394331 STARD9Q9P2P6 4700 aa10.89□□□□□ -0.67
HOXC6-202ENST00000394331 KRTAP25-1Q3LHN0 102 aa10.84□□□□□ -0.67
HOXC6-202ENST00000394331 ROMO1P60602 79 aa10.83□□□□□ -0.68
HOXC6-202ENST00000394331 J3QL48 77 aa10.81□□□□□ -0.68
HOXC6-202ENST00000394331 LY6G6CO95867 125 aa10.8□□□□□ -0.68
HOXC6-202ENST00000394331 SPINK6Q6UWN8 80 aa10.8□□□□□ -0.68
HOXC6-202ENST00000394331 PRKDCP78527 4128 aaKnown RBP10.79□□□□□ -0.68
HOXC6-202ENST00000394331 A8MUU9 505 aa10.78□□□□□ -0.68
HOXC6-202ENST00000394331 DNAH17Q9UFH2 4485 aa10.78□□□□□ -0.68
HOXC6-202ENST00000394331 HECTD4Q9Y4D8 3996 aa10.76□□□□□ -0.69
HOXC6-202ENST00000394331 SSBP3-AS1Q7Z2R9 100 aa10.76□□□□□ -0.69
HOXC6-202ENST00000394331 CIRBP-AS1Q8TBR5 109 aa10.74□□□□□ -0.69
HOXC6-202ENST00000394331 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
HOXC6-202ENST00000394331 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.7
HOXC6-202ENST00000394331 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
HOXC6-202ENST00000394331 KMT2AQ03164 3969 aa10.7□□□□□ -0.7
HOXC6-202ENST00000394331 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
HOXC6-202ENST00000394331 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
HOXC6-202ENST00000394331 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.7
HOXC6-202ENST00000394331 TGP01266 2768 aa10.63□□□□□ -0.71
HOXC6-202ENST00000394331 KRTAP16-1A8MUX0 517 aa10.63□□□□□ -0.71
HOXC6-202ENST00000394331 H0YAA0 97 aa10.62□□□□□ -0.71
HOXC6-202ENST00000394331 FRAS1Q86XX4 4008 aa10.62□□□□□ -0.71
HOXC6-202ENST00000394331 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
HOXC6-202ENST00000394331 Q6ZSA8 131 aa10.6□□□□□ -0.71
HOXC6-202ENST00000394331 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
HOXC6-202ENST00000394331 KRTAP13-2Q52LG2 175 aa10.54□□□□□ -0.72
HOXC6-202ENST00000394331 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
HOXC6-202ENST00000394331 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
HOXC6-202ENST00000394331 P0C880 135 aa10.48□□□□□ -0.73
HOXC6-202ENST00000394331 DNHD1Q96M86 4753 aa10.47□□□□□ -0.73
HOXC6-202ENST00000394331 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.74
HOXC6-202ENST00000394331 SPINK1P00995 79 aa10.45□□□□□ -0.74
HOXC6-202ENST00000394331 KRTAP1-4P0C5Y4 121 aa10.45□□□□□ -0.74
HOXC6-202ENST00000394331 A0A1B0GU33 70 aa10.44□□□□□ -0.74
HOXC6-202ENST00000394331 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.74
HOXC6-202ENST00000394331 K7ERS5 55 aa10.36□□□□□ -0.75
HOXC6-202ENST00000394331 TYMSOSQ8TAI1 123 aa10.36□□□□□ -0.75
HOXC6-202ENST00000394331 Q8N1X5 172 aa10.35□□□□□ -0.75
HOXC6-202ENST00000394331 LRP1BQ9NZR2 4599 aa10.33□□□□□ -0.76
HOXC6-202ENST00000394331 PKD1P98161 4303 aa10.29□□□□□ -0.76
HOXC6-202ENST00000394331 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.77
HOXC6-202ENST00000394331 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
HOXC6-202ENST00000394331 KRTAP21-3Q3LHN1 58 aa10.24□□□□□ -0.77
HOXC6-202ENST00000394331 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
HOXC6-202ENST00000394331 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
HOXC6-202ENST00000394331 CRIPTQ9P021 101 aa10.19□□□□□ -0.78
HOXC6-202ENST00000394331 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
HOXC6-202ENST00000394331 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
HOXC6-202ENST00000394331 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
HOXC6-202ENST00000394331 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
HOXC6-202ENST00000394331 KRTAP15-1Q3LI76 137 aa10.08□□□□□ -0.8
HOXC6-202ENST00000394331 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
HOXC6-202ENST00000394331 C20orf166-AS1Q96NR2 134 aa10.07□□□□□ -0.8
HOXC6-202ENST00000394331 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
HOXC6-202ENST00000394331 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
HOXC6-202ENST00000394331 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
HOXC6-202ENST00000394331 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
HOXC6-202ENST00000394331 NDUFAF8A1L188 74 aa10□□□□□ -0.81
HOXC6-202ENST00000394331 SACSQ9NZJ4 4579 aa9.98□□□□□ -0.81
HOXC6-202ENST00000394331 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.81
HOXC6-202ENST00000394331 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms