RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
R3HDM2-203ENST00000393811 A0A087WTM6 91 aa7.06□□□□□ -1.28
R3HDM2-203ENST00000393811 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
R3HDM2-203ENST00000393811 LINC00313P59037 77 aa7.04□□□□□ -1.28
R3HDM2-203ENST00000393811 SPINK1P00995 79 aa7.03□□□□□ -1.28
R3HDM2-203ENST00000393811 Q5W150 140 aa7.03□□□□□ -1.28
R3HDM2-203ENST00000393811 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
R3HDM2-203ENST00000393811 COL7A1Q02388 2944 aa7.03□□□□□ -1.28
R3HDM2-203ENST00000393811 CSMD3Q7Z407 3707 aa7.03□□□□□ -1.28
R3HDM2-203ENST00000393811 A6NN06 94 aa7.02□□□□□ -1.29
R3HDM2-203ENST00000393811 PRAC1Q96KF2 57 aa7□□□□□ -1.29
R3HDM2-203ENST00000393811 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
R3HDM2-203ENST00000393811 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
R3HDM2-203ENST00000393811 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
R3HDM2-203ENST00000393811 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
R3HDM2-203ENST00000393811 LY6G6CO95867 125 aa6.98□□□□□ -1.29
R3HDM2-203ENST00000393811 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
R3HDM2-203ENST00000393811 C1orf134Q5TEV5 83 aa6.97□□□□□ -1.29
R3HDM2-203ENST00000393811 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
R3HDM2-203ENST00000393811 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
R3HDM2-203ENST00000393811 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
R3HDM2-203ENST00000393811 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
R3HDM2-203ENST00000393811 UQCR11O14957 56 aa6.93□□□□□ -1.3
R3HDM2-203ENST00000393811 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
R3HDM2-203ENST00000393811 DMAC1Q96GE9 116 aa6.88□□□□□ -1.31
R3HDM2-203ENST00000393811 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
R3HDM2-203ENST00000393811 ADM2Q7Z4H4 148 aa6.87□□□□□ -1.31
R3HDM2-203ENST00000393811 TGP01266 2768 aa6.86□□□□□ -1.31
R3HDM2-203ENST00000393811 Q8N1X5 172 aa6.84□□□□□ -1.31
R3HDM2-203ENST00000393811 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
R3HDM2-203ENST00000393811 ANK2Q01484 3957 aa6.81□□□□□ -1.32
R3HDM2-203ENST00000393811 TYMSOSQ8TAI1 123 aa6.79□□□□□ -1.32
R3HDM2-203ENST00000393811 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
R3HDM2-203ENST00000393811 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
R3HDM2-203ENST00000393811 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
R3HDM2-203ENST00000393811 FBN3Q75N90 2809 aa6.76□□□□□ -1.33
R3HDM2-203ENST00000393811 CMYA5Q8N3K9 4069 aa6.76□□□□□ -1.33
R3HDM2-203ENST00000393811 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
R3HDM2-203ENST00000393811 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
R3HDM2-203ENST00000393811 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
R3HDM2-203ENST00000393811 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
R3HDM2-203ENST00000393811 KRTAP13-2Q52LG2 175 aa6.72□□□□□ -1.33
R3HDM2-203ENST00000393811 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
R3HDM2-203ENST00000393811 FLG2Q5D862 2391 aaPredicted RBP6.69□□□□□ -1.34
R3HDM2-203ENST00000393811 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
R3HDM2-203ENST00000393811 K7ERS5 55 aa6.67□□□□□ -1.34
R3HDM2-203ENST00000393811 KRTAP21-3Q3LHN1 58 aa6.66□□□□□ -1.34
R3HDM2-203ENST00000393811 KRTAP10-1P60331 282 aa6.65□□□□□ -1.34
R3HDM2-203ENST00000393811 LYSTQ99698 3801 aa6.65□□□□□ -1.35
R3HDM2-203ENST00000393811 LINC00304Q8N9R0 145 aa6.64□□□□□ -1.35
R3HDM2-203ENST00000393811 DNAH9Q9NYC9 4486 aa6.63□□□□□ -1.35
R3HDM2-203ENST00000393811 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
R3HDM2-203ENST00000393811 A0A1B0GU33 70 aa6.6□□□□□ -1.35
R3HDM2-203ENST00000393811 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
R3HDM2-203ENST00000393811 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
R3HDM2-203ENST00000393811 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
R3HDM2-203ENST00000393811 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
R3HDM2-203ENST00000393811 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
R3HDM2-203ENST00000393811 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
R3HDM2-203ENST00000393811 H3BS24 57 aa6.56□□□□□ -1.36
R3HDM2-203ENST00000393811 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
R3HDM2-203ENST00000393811 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
R3HDM2-203ENST00000393811 Q6ZSA8 131 aa6.5□□□□□ -1.37
R3HDM2-203ENST00000393811 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
R3HDM2-203ENST00000393811 A0A0D9SG42 100 aa6.46□□□□□ -1.38
R3HDM2-203ENST00000393811 H0YAA0 97 aa6.46□□□□□ -1.38
R3HDM2-203ENST00000393811 DNAH7Q8WXX0 4024 aa6.45□□□□□ -1.38
R3HDM2-203ENST00000393811 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
R3HDM2-203ENST00000393811 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
R3HDM2-203ENST00000393811 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
R3HDM2-203ENST00000393811 A8MUU9 505 aa6.4□□□□□ -1.38
R3HDM2-203ENST00000393811 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
R3HDM2-203ENST00000393811 STARD9Q9P2P6 4700 aa6.37□□□□□ -1.39
R3HDM2-203ENST00000393811 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
R3HDM2-203ENST00000393811 KMT2AQ03164 3969 aa6.33□□□□□ -1.4
R3HDM2-203ENST00000393811 DNAH17Q9UFH2 4485 aa6.32□□□□□ -1.4
R3HDM2-203ENST00000393811 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
R3HDM2-203ENST00000393811 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
R3HDM2-203ENST00000393811 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
R3HDM2-203ENST00000393811 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
R3HDM2-203ENST00000393811 ROMO1P60602 79 aa6.31□□□□□ -1.4
R3HDM2-203ENST00000393811 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
R3HDM2-203ENST00000393811 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
R3HDM2-203ENST00000393811 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
R3HDM2-203ENST00000393811 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
R3HDM2-203ENST00000393811 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
R3HDM2-203ENST00000393811 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
R3HDM2-203ENST00000393811 S4R3F8 94 aa6.2□□□□□ -1.42
R3HDM2-203ENST00000393811 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
R3HDM2-203ENST00000393811 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
R3HDM2-203ENST00000393811 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
R3HDM2-203ENST00000393811 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
R3HDM2-203ENST00000393811 HYDINQ4G0P3 5121 aa6.12□□□□□ -1.43
R3HDM2-203ENST00000393811 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
R3HDM2-203ENST00000393811 SACSQ9NZJ4 4579 aa6.08□□□□□ -1.44
R3HDM2-203ENST00000393811 P0C880 135 aa6.07□□□□□ -1.44
R3HDM2-203ENST00000393811 VPS13BQ7Z7G8 4022 aa6.07□□□□□ -1.44
R3HDM2-203ENST00000393811 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
R3HDM2-203ENST00000393811 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
R3HDM2-203ENST00000393811 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms