RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
CALD1-203ENST00000393118 IGLV7-43P04211 117 aa6.41□□□□□ -1.38
CALD1-203ENST00000393118 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
CALD1-203ENST00000393118 UQCR11O14957 56 aa6.4□□□□□ -1.38
CALD1-203ENST00000393118 SPRR1BP22528 89 aa6.4□□□□□ -1.38
CALD1-203ENST00000393118 A0A1B0GVX0 72 aa6.4□□□□□ -1.39
CALD1-203ENST00000393118 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
CALD1-203ENST00000393118 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
CALD1-203ENST00000393118 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
CALD1-203ENST00000393118 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
CALD1-203ENST00000393118 HRES1P13985 223 aa6.37□□□□□ -1.39
CALD1-203ENST00000393118 K7ERS5 55 aa6.36□□□□□ -1.39
CALD1-203ENST00000393118 LCE6AA0A183 80 aa6.36□□□□□ -1.39
CALD1-203ENST00000393118 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
CALD1-203ENST00000393118 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CALD1-203ENST00000393118 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
CALD1-203ENST00000393118 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
CALD1-203ENST00000393118 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.39
CALD1-203ENST00000393118 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
CALD1-203ENST00000393118 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
CALD1-203ENST00000393118 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
CALD1-203ENST00000393118 KRTAP10-2P60368 255 aa6.32□□□□□ -1.4
CALD1-203ENST00000393118 SMR3BP02814 79 aaPredicted RBP6.31□□□□□ -1.4
CALD1-203ENST00000393118 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
CALD1-203ENST00000393118 Q6ZR54 194 aa6.3□□□□□ -1.4
CALD1-203ENST00000393118 KRTAP29-1A8MX34 341 aaPredicted RBP6.29□□□□□ -1.4
CALD1-203ENST00000393118 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
CALD1-203ENST00000393118 COL7A1Q02388 2944 aa6.27□□□□□ -1.41
CALD1-203ENST00000393118 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
CALD1-203ENST00000393118 Q96NJ1 140 aa6.25□□□□□ -1.41
CALD1-203ENST00000393118 A0A087X002 238 aa6.25□□□□□ -1.41
CALD1-203ENST00000393118 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
CALD1-203ENST00000393118 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
CALD1-203ENST00000393118 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
CALD1-203ENST00000393118 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
CALD1-203ENST00000393118 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
CALD1-203ENST00000393118 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
CALD1-203ENST00000393118 HUWE1Q7Z6Z7 4374 aaKnown RBP6.19□□□□□ -1.42
CALD1-203ENST00000393118 LINC00304Q8N9R0 145 aa6.18□□□□□ -1.42
CALD1-203ENST00000393118 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
CALD1-203ENST00000393118 MEGF8Q7Z7M0 2845 aa6.17□□□□□ -1.42
CALD1-203ENST00000393118 ANK2Q01484 3957 aa6.15□□□□□ -1.42
CALD1-203ENST00000393118 Q5W150 140 aa6.13□□□□□ -1.43
CALD1-203ENST00000393118 Q8N1X5 172 aa6.11□□□□□ -1.43
CALD1-203ENST00000393118 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
CALD1-203ENST00000393118 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
CALD1-203ENST00000393118 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
CALD1-203ENST00000393118 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
CALD1-203ENST00000393118 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
CALD1-203ENST00000393118 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
CALD1-203ENST00000393118 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
CALD1-203ENST00000393118 ROMO1P60602 79 aa6.01□□□□□ -1.45
CALD1-203ENST00000393118 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
CALD1-203ENST00000393118 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
CALD1-203ENST00000393118 A0A0D9SG42 100 aa5.98□□□□□ -1.45
CALD1-203ENST00000393118 A0A1B0GU33 70 aa5.98□□□□□ -1.45
CALD1-203ENST00000393118 Q6ZSA8 131 aa5.96□□□□□ -1.46
CALD1-203ENST00000393118 J3QL48 77 aa5.96□□□□□ -1.46
CALD1-203ENST00000393118 LYSTQ99698 3801 aa5.95□□□□□ -1.46
CALD1-203ENST00000393118 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
CALD1-203ENST00000393118 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
CALD1-203ENST00000393118 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
CALD1-203ENST00000393118 A8MUU9 505 aa5.88□□□□□ -1.47
CALD1-203ENST00000393118 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
CALD1-203ENST00000393118 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
CALD1-203ENST00000393118 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
CALD1-203ENST00000393118 DNAH3Q8TD57 4116 aa5.85□□□□□ -1.47
CALD1-203ENST00000393118 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.47
CALD1-203ENST00000393118 A0A0A0MQY5 61 aa5.82□□□□□ -1.48
CALD1-203ENST00000393118 Q5VSD8 79 aa5.82□□□□□ -1.48
CALD1-203ENST00000393118 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
CALD1-203ENST00000393118 H1FX-AS1Q4G0G2 97 aa5.79□□□□□ -1.48
CALD1-203ENST00000393118 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
CALD1-203ENST00000393118 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
CALD1-203ENST00000393118 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
CALD1-203ENST00000393118 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
CALD1-203ENST00000393118 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
CALD1-203ENST00000393118 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
CALD1-203ENST00000393118 H0YAA0 97 aa5.72□□□□□ -1.49
CALD1-203ENST00000393118 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.49
CALD1-203ENST00000393118 LUZP6Q538Z0 58 aa5.71□□□□□ -1.5
CALD1-203ENST00000393118 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
CALD1-203ENST00000393118 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
CALD1-203ENST00000393118 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
CALD1-203ENST00000393118 DNAH17Q9UFH2 4485 aa5.67□□□□□ -1.5
CALD1-203ENST00000393118 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
CALD1-203ENST00000393118 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
CALD1-203ENST00000393118 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
CALD1-203ENST00000393118 P0C880 135 aa5.63□□□□□ -1.51
CALD1-203ENST00000393118 LRP1BQ9NZR2 4599 aa5.63□□□□□ -1.51
CALD1-203ENST00000393118 DNAH2Q9P225 4427 aa5.63□□□□□ -1.51
CALD1-203ENST00000393118 S4R3F8 94 aa5.61□□□□□ -1.51
CALD1-203ENST00000393118 DNAH5Q8TE73 4624 aa5.61□□□□□ -1.51
CALD1-203ENST00000393118 DNAH6Q9C0G6 4158 aa5.59□□□□□ -1.51
CALD1-203ENST00000393118 HECTD4Q9Y4D8 3996 aa5.58□□□□□ -1.52
CALD1-203ENST00000393118 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
CALD1-203ENST00000393118 FAT1Q14517 4588 aa5.56□□□□□ -1.52
CALD1-203ENST00000393118 XP32Q5T750 250 aa5.52□□□□□ -1.53
CALD1-203ENST00000393118 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
CALD1-203ENST00000393118 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms