RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
PCDHGA1-201ENST00000378105 HSPG2P98160 4391 aa6.87□□□□□ -1.31
PCDHGA1-201ENST00000378105 Q9BRP9 147 aa6.87□□□□□ -1.31
PCDHGA1-201ENST00000378105 H0Y9P7 68 aa6.86□□□□□ -1.31
PCDHGA1-201ENST00000378105 A0A087WTM6 91 aa6.86□□□□□ -1.31
PCDHGA1-201ENST00000378105 A0A0G2JQZ4 141 aa6.85□□□□□ -1.31
PCDHGA1-201ENST00000378105 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
PCDHGA1-201ENST00000378105 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
PCDHGA1-201ENST00000378105 A0A087WSZ3 146 aa6.82□□□□□ -1.32
PCDHGA1-201ENST00000378105 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
PCDHGA1-201ENST00000378105 TNP2Q05952 138 aa6.81□□□□□ -1.32
PCDHGA1-201ENST00000378105 RPL37AP61513 92 aaKnown RBP6.81□□□□□ -1.32
PCDHGA1-201ENST00000378105 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
PCDHGA1-201ENST00000378105 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
PCDHGA1-201ENST00000378105 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 TNXBP22105 4242 aa6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 LCE6AA0A183 80 aa6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 IGLV8-61A0A075B6I0 122 aa6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 P0C880 135 aa6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
PCDHGA1-201ENST00000378105 IGLV1-50A0A075B6I6 118 aa6.79□□□□□ -1.32
PCDHGA1-201ENST00000378105 DSCR10P59022 87 aa6.78□□□□□ -1.32
PCDHGA1-201ENST00000378105 Q6ZRX8 168 aa6.78□□□□□ -1.32
PCDHGA1-201ENST00000378105 KRTAP1-5Q9BYS1 174 aa6.77□□□□□ -1.33
PCDHGA1-201ENST00000378105 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
PCDHGA1-201ENST00000378105 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
PCDHGA1-201ENST00000378105 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
PCDHGA1-201ENST00000378105 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
PCDHGA1-201ENST00000378105 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
PCDHGA1-201ENST00000378105 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
PCDHGA1-201ENST00000378105 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
PCDHGA1-201ENST00000378105 A8MWP4 228 aa6.73□□□□□ -1.33
PCDHGA1-201ENST00000378105 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
PCDHGA1-201ENST00000378105 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
PCDHGA1-201ENST00000378105 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
PCDHGA1-201ENST00000378105 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.34
PCDHGA1-201ENST00000378105 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.69□□□□□ -1.34
PCDHGA1-201ENST00000378105 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
PCDHGA1-201ENST00000378105 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
PCDHGA1-201ENST00000378105 HRES1P13985 223 aa6.68□□□□□ -1.34
PCDHGA1-201ENST00000378105 PSORS1C2Q9UIG4 136 aa6.68□□□□□ -1.34
PCDHGA1-201ENST00000378105 TLX1NBP0CAT3 122 aa6.67□□□□□ -1.34
PCDHGA1-201ENST00000378105 TYMSOSQ8TAI1 123 aa6.66□□□□□ -1.34
PCDHGA1-201ENST00000378105 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
PCDHGA1-201ENST00000378105 SPINT4Q6UDR6 99 aa6.64□□□□□ -1.35
PCDHGA1-201ENST00000378105 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
PCDHGA1-201ENST00000378105 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
PCDHGA1-201ENST00000378105 A0A1B0GU69 56 aa6.63□□□□□ -1.35
PCDHGA1-201ENST00000378105 ZNF861PO60384 105 aa6.63□□□□□ -1.35
PCDHGA1-201ENST00000378105 Q8NBF4 154 aa6.61□□□□□ -1.35
PCDHGA1-201ENST00000378105 Q8N377 158 aa6.61□□□□□ -1.35
PCDHGA1-201ENST00000378105 A8MUU9 505 aa6.59□□□□□ -1.35
PCDHGA1-201ENST00000378105 KRTAP26-1Q6PEX3 210 aa6.59□□□□□ -1.35
PCDHGA1-201ENST00000378105 SSBP3-AS1Q7Z2R9 100 aa6.59□□□□□ -1.36
PCDHGA1-201ENST00000378105 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
PCDHGA1-201ENST00000378105 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
PCDHGA1-201ENST00000378105 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
PCDHGA1-201ENST00000378105 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
PCDHGA1-201ENST00000378105 RYR1P21817 5038 aa6.56□□□□□ -1.36
PCDHGA1-201ENST00000378105 IGFL1Q6UW32 110 aa6.56□□□□□ -1.36
PCDHGA1-201ENST00000378105 LINC00483Q53H64 154 aa6.55□□□□□ -1.36
PCDHGA1-201ENST00000378105 FAT1Q14517 4588 aa6.55□□□□□ -1.36
PCDHGA1-201ENST00000378105 J3QL48 77 aa6.54□□□□□ -1.36
PCDHGA1-201ENST00000378105 UQCR11O14957 56 aa6.53□□□□□ -1.36
PCDHGA1-201ENST00000378105 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
PCDHGA1-201ENST00000378105 PANO1I0J062 215 aa6.53□□□□□ -1.36
PCDHGA1-201ENST00000378105 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
PCDHGA1-201ENST00000378105 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
PCDHGA1-201ENST00000378105 SPRR4Q96PI1 79 aa6.51□□□□□ -1.37
PCDHGA1-201ENST00000378105 MYCBP2O75592 4640 aa6.51□□□□□ -1.37
PCDHGA1-201ENST00000378105 IGLV5-37A0A075B6J1 123 aa6.51□□□□□ -1.37
PCDHGA1-201ENST00000378105 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
PCDHGA1-201ENST00000378105 HERC2O95714 4834 aa6.5□□□□□ -1.37
PCDHGA1-201ENST00000378105 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
PCDHGA1-201ENST00000378105 IGKV2D-30A0A075B6S6 120 aa6.49□□□□□ -1.37
PCDHGA1-201ENST00000378105 IGKV2-30P06310 120 aa6.49□□□□□ -1.37
PCDHGA1-201ENST00000378105 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
PCDHGA1-201ENST00000378105 IGLV5-48A0A075B6I7 105 aa6.47□□□□□ -1.37
PCDHGA1-201ENST00000378105 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
PCDHGA1-201ENST00000378105 H3BPC8 53 aa6.47□□□□□ -1.37
PCDHGA1-201ENST00000378105 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
PCDHGA1-201ENST00000378105 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
PCDHGA1-201ENST00000378105 C9orf92A6NGG3 77 aa6.44□□□□□ -1.38
PCDHGA1-201ENST00000378105 Q96NJ1 140 aa6.44□□□□□ -1.38
PCDHGA1-201ENST00000378105 SPINK1P00995 79 aa6.41□□□□□ -1.38
PCDHGA1-201ENST00000378105 Q6ZRN7 208 aaPredicted RBP6.41□□□□□ -1.38
PCDHGA1-201ENST00000378105 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
PCDHGA1-201ENST00000378105 A0A1B0GW54 56 aa6.4□□□□□ -1.39
PCDHGA1-201ENST00000378105 SPRR1AP35321 89 aa6.39□□□□□ -1.39
PCDHGA1-201ENST00000378105 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
PCDHGA1-201ENST00000378105 LPAP08519 4548 aa6.38□□□□□ -1.39
PCDHGA1-201ENST00000378105 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
PCDHGA1-201ENST00000378105 ACYP2P14621 99 aa6.35□□□□□ -1.39
PCDHGA1-201ENST00000378105 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
PCDHGA1-201ENST00000378105 Q5VSD8 79 aa6.34□□□□□ -1.39
PCDHGA1-201ENST00000378105 MRPL34Q9BQ48 92 aaKnown RBP6.32□□□□□ -1.4
PCDHGA1-201ENST00000378105 A0A1B0GVX0 72 aa6.32□□□□□ -1.4
PCDHGA1-201ENST00000378105 KRTAP7-1Q8IUC3 87 aa6.31□□□□□ -1.4
PCDHGA1-201ENST00000378105 K7ERS5 55 aa6.3□□□□□ -1.4
PCDHGA1-201ENST00000378105 MMP24-AS1A0A0U1RRL7 71 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms