RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
DDR1-227ENST00000376570 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
DDR1-227ENST00000376570 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
DDR1-227ENST00000376570 Q6ZR54 194 aa6.94□□□□□ -1.3
DDR1-227ENST00000376570 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
DDR1-227ENST00000376570 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
DDR1-227ENST00000376570 CD164Q04900 197 aa6.93□□□□□ -1.3
DDR1-227ENST00000376570 PLAC8Q9NZF1 115 aa6.93□□□□□ -1.3
DDR1-227ENST00000376570 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
DDR1-227ENST00000376570 Q8N1X5 172 aa6.91□□□□□ -1.3
DDR1-227ENST00000376570 H3BPC8 53 aa6.89□□□□□ -1.31
DDR1-227ENST00000376570 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
DDR1-227ENST00000376570 SPINK7P58062 85 aa6.89□□□□□ -1.31
DDR1-227ENST00000376570 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
DDR1-227ENST00000376570 A0A1B0GU69 56 aa6.86□□□□□ -1.31
DDR1-227ENST00000376570 C7orf65Q6ZTY9 151 aa6.86□□□□□ -1.31
DDR1-227ENST00000376570 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
DDR1-227ENST00000376570 LCA10Q71F78 164 aa6.86□□□□□ -1.31
DDR1-227ENST00000376570 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
DDR1-227ENST00000376570 SPRR1BP22528 89 aa6.85□□□□□ -1.31
DDR1-227ENST00000376570 Q5W150 140 aa6.85□□□□□ -1.31
DDR1-227ENST00000376570 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
DDR1-227ENST00000376570 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
DDR1-227ENST00000376570 HRES1P13985 223 aa6.84□□□□□ -1.31
DDR1-227ENST00000376570 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.31
DDR1-227ENST00000376570 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
DDR1-227ENST00000376570 LINC00304Q8N9R0 145 aa6.83□□□□□ -1.32
DDR1-227ENST00000376570 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
DDR1-227ENST00000376570 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
DDR1-227ENST00000376570 ACYP2P14621 99 aa6.82□□□□□ -1.32
DDR1-227ENST00000376570 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
DDR1-227ENST00000376570 LCE6AA0A183 80 aa6.82□□□□□ -1.32
DDR1-227ENST00000376570 PRKDCP78527 4128 aaKnown RBP6.81□□□□□ -1.32
DDR1-227ENST00000376570 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
DDR1-227ENST00000376570 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
DDR1-227ENST00000376570 DNAH9Q9NYC9 4486 aa6.78□□□□□ -1.32
DDR1-227ENST00000376570 Q75L30 129 aa6.77□□□□□ -1.33
DDR1-227ENST00000376570 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
DDR1-227ENST00000376570 FAM229AH3BQW9 127 aa6.74□□□□□ -1.33
DDR1-227ENST00000376570 DNAH7Q8WXX0 4024 aa6.74□□□□□ -1.33
DDR1-227ENST00000376570 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
DDR1-227ENST00000376570 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
DDR1-227ENST00000376570 LINC00483Q53H64 154 aa6.73□□□□□ -1.33
DDR1-227ENST00000376570 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
DDR1-227ENST00000376570 LINC01558Q9Y6Z2 57 aa6.71□□□□□ -1.34
DDR1-227ENST00000376570 H3BS24 57 aa6.69□□□□□ -1.34
DDR1-227ENST00000376570 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
DDR1-227ENST00000376570 C8orf87E5RJ46 101 aa6.68□□□□□ -1.34
DDR1-227ENST00000376570 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
DDR1-227ENST00000376570 UQCR11O14957 56 aa6.65□□□□□ -1.34
DDR1-227ENST00000376570 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
DDR1-227ENST00000376570 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
DDR1-227ENST00000376570 A6NN06 94 aa6.6□□□□□ -1.35
DDR1-227ENST00000376570 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
DDR1-227ENST00000376570 Q5VSD8 79 aa6.57□□□□□ -1.36
DDR1-227ENST00000376570 FRAS1Q86XX4 4008 aa6.56□□□□□ -1.36
DDR1-227ENST00000376570 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
DDR1-227ENST00000376570 A0A0D9SG42 100 aa6.54□□□□□ -1.36
DDR1-227ENST00000376570 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
DDR1-227ENST00000376570 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
DDR1-227ENST00000376570 FAT1Q14517 4588 aa6.51□□□□□ -1.37
DDR1-227ENST00000376570 Q6ZSA8 131 aa6.5□□□□□ -1.37
DDR1-227ENST00000376570 K7ERS5 55 aa6.49□□□□□ -1.37
DDR1-227ENST00000376570 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
DDR1-227ENST00000376570 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
DDR1-227ENST00000376570 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
DDR1-227ENST00000376570 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
DDR1-227ENST00000376570 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
DDR1-227ENST00000376570 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
DDR1-227ENST00000376570 J3QL48 77 aa6.43□□□□□ -1.38
DDR1-227ENST00000376570 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
DDR1-227ENST00000376570 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
DDR1-227ENST00000376570 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
DDR1-227ENST00000376570 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
DDR1-227ENST00000376570 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
DDR1-227ENST00000376570 KRTAP21-3Q3LHN1 58 aa6.38□□□□□ -1.39
DDR1-227ENST00000376570 A0A1B0GU33 70 aa6.37□□□□□ -1.39
DDR1-227ENST00000376570 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
DDR1-227ENST00000376570 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
DDR1-227ENST00000376570 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
DDR1-227ENST00000376570 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
DDR1-227ENST00000376570 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
DDR1-227ENST00000376570 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
DDR1-227ENST00000376570 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
DDR1-227ENST00000376570 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
DDR1-227ENST00000376570 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
DDR1-227ENST00000376570 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
DDR1-227ENST00000376570 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
DDR1-227ENST00000376570 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
DDR1-227ENST00000376570 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
DDR1-227ENST00000376570 KIAA1109Q2LD37 5005 aa6.22□□□□□ -1.41
DDR1-227ENST00000376570 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
DDR1-227ENST00000376570 KMT2CQ8NEZ4 4911 aaKnown RBP6.19□□□□□ -1.42
DDR1-227ENST00000376570 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
DDR1-227ENST00000376570 S4R3F8 94 aa6.17□□□□□ -1.42
DDR1-227ENST00000376570 H0YAA0 97 aa6.17□□□□□ -1.42
DDR1-227ENST00000376570 A8MUU9 505 aa6.15□□□□□ -1.42
DDR1-227ENST00000376570 XP32Q5T750 250 aa6.13□□□□□ -1.43
DDR1-227ENST00000376570 RYR1P21817 5038 aa6.13□□□□□ -1.43
DDR1-227ENST00000376570 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms