RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SPATA8Q6RVD6 105 aa12.3□□□□□ -0.44
TMEFF1-201ENST00000374879 A0A1B0GU69 56 aa12.28□□□□□ -0.44
TMEFF1-201ENST00000374879 CDK2AP2O75956 126 aa12.27□□□□□ -0.45
TMEFF1-201ENST00000374879 COL7A1Q02388 2944 aa12.26□□□□□ -0.45
TMEFF1-201ENST00000374879 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
TMEFF1-201ENST00000374879 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
TMEFF1-201ENST00000374879 KRTAP13-3Q3SY46 172 aa12.22□□□□□ -0.45
TMEFF1-201ENST00000374879 CSAG1Q6PB30 78 aa12.22□□□□□ -0.45
TMEFF1-201ENST00000374879 MIR22HGQ0VDD5 57 aa12.21□□□□□ -0.45
TMEFF1-201ENST00000374879 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.46
TMEFF1-201ENST00000374879 KRTAP13-1Q8IUC0 172 aa12.19□□□□□ -0.46
TMEFF1-201ENST00000374879 DMAC1Q96GE9 116 aa12.17□□□□□ -0.46
TMEFF1-201ENST00000374879 APLNQ9ULZ1 77 aa12.16□□□□□ -0.46
TMEFF1-201ENST00000374879 UQCR11O14957 56 aa12.14□□□□□ -0.47
TMEFF1-201ENST00000374879 RETNLBQ9BQ08 111 aa12.14□□□□□ -0.47
TMEFF1-201ENST00000374879 DNAH7Q8WXX0 4024 aa12.14□□□□□ -0.47
TMEFF1-201ENST00000374879 C14orf177Q52M58 125 aa12.13□□□□□ -0.47
TMEFF1-201ENST00000374879 PANO1I0J062 215 aa12.08□□□□□ -0.47
TMEFF1-201ENST00000374879 SPINK6Q6UWN8 80 aa12.08□□□□□ -0.48
TMEFF1-201ENST00000374879 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
TMEFF1-201ENST00000374879 ANAPC11Q9NYG5 84 aa12.06□□□□□ -0.48
TMEFF1-201ENST00000374879 WWC2-AS2Q96NR7 200 aa12.04□□□□□ -0.48
TMEFF1-201ENST00000374879 NBDYA0A0U1RRE5 68 aa12□□□□□ -0.49
TMEFF1-201ENST00000374879 ZNF861PO60384 105 aa11.99□□□□□ -0.49
TMEFF1-201ENST00000374879 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
TMEFF1-201ENST00000374879 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
TMEFF1-201ENST00000374879 PLECQ15149 4684 aaKnown RBP11.93□□□□□ -0.5
TMEFF1-201ENST00000374879 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
TMEFF1-201ENST00000374879 NUPR2A6NF83 97 aa11.9□□□□□ -0.5
TMEFF1-201ENST00000374879 ZNF706Q9Y5V0 76 aaPredicted RBP11.9□□□□□ -0.5
TMEFF1-201ENST00000374879 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.51
TMEFF1-201ENST00000374879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.9□□□□□ -0.51
TMEFF1-201ENST00000374879 IGKV2-30P06310 120 aa11.89□□□□□ -0.51
TMEFF1-201ENST00000374879 SPACA4Q8TDM5 124 aa11.86□□□□□ -0.51
TMEFF1-201ENST00000374879 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
TMEFF1-201ENST00000374879 DNAH8Q96JB1 4490 aa11.86□□□□□ -0.51
TMEFF1-201ENST00000374879 IGLV7-43P04211 117 aa11.83□□□□□ -0.52
TMEFF1-201ENST00000374879 PSORS1C2Q9UIG4 136 aa11.8□□□□□ -0.52
TMEFF1-201ENST00000374879 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
TMEFF1-201ENST00000374879 A0A087WTM6 91 aa11.79□□□□□ -0.52
TMEFF1-201ENST00000374879 STARD9Q9P2P6 4700 aa11.77□□□□□ -0.53
TMEFF1-201ENST00000374879 IGLV5-52A0A0A0MRZ9 124 aa11.74□□□□□ -0.53
TMEFF1-201ENST00000374879 ROMO1P60602 79 aa11.73□□□□□ -0.53
TMEFF1-201ENST00000374879 KRTAP25-1Q3LHN0 102 aa11.73□□□□□ -0.53
TMEFF1-201ENST00000374879 PRKDCP78527 4128 aaKnown RBP11.73□□□□□ -0.53
TMEFF1-201ENST00000374879 KMT2AQ03164 3969 aa11.73□□□□□ -0.53
TMEFF1-201ENST00000374879 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
TMEFF1-201ENST00000374879 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
TMEFF1-201ENST00000374879 SPINK1P00995 79 aa11.7□□□□□ -0.54
TMEFF1-201ENST00000374879 A8MUU9 505 aa11.69□□□□□ -0.54
TMEFF1-201ENST00000374879 MEGF8Q7Z7M0 2845 aa11.65□□□□□ -0.54
TMEFF1-201ENST00000374879 LINC00304Q8N9R0 145 aa11.65□□□□□ -0.54
TMEFF1-201ENST00000374879 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
TMEFF1-201ENST00000374879 TGP01266 2768 aa11.63□□□□□ -0.55
TMEFF1-201ENST00000374879 H0YAA0 97 aa11.63□□□□□ -0.55
TMEFF1-201ENST00000374879 DNHD1Q96M86 4753 aa11.62□□□□□ -0.55
TMEFF1-201ENST00000374879 Q6ZSA8 131 aa11.61□□□□□ -0.55
TMEFF1-201ENST00000374879 KRTAP16-1A8MUX0 517 aa11.6□□□□□ -0.55
TMEFF1-201ENST00000374879 DNAH2Q9P225 4427 aa11.6□□□□□ -0.55
TMEFF1-201ENST00000374879 DNAH17Q9UFH2 4485 aa11.59□□□□□ -0.55
TMEFF1-201ENST00000374879 LY6G6CO95867 125 aa11.57□□□□□ -0.56
TMEFF1-201ENST00000374879 Q8N1X5 172 aa11.54□□□□□ -0.56
TMEFF1-201ENST00000374879 SSBP3-AS1Q7Z2R9 100 aa11.53□□□□□ -0.56
TMEFF1-201ENST00000374879 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
TMEFF1-201ENST00000374879 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
TMEFF1-201ENST00000374879 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
TMEFF1-201ENST00000374879 P0C880 135 aa11.47□□□□□ -0.57
TMEFF1-201ENST00000374879 TYMSOSQ8TAI1 123 aa11.46□□□□□ -0.58
TMEFF1-201ENST00000374879 DNAH6Q9C0G6 4158 aa11.42□□□□□ -0.58
TMEFF1-201ENST00000374879 A0A1B0GU33 70 aa11.4□□□□□ -0.58
TMEFF1-201ENST00000374879 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
TMEFF1-201ENST00000374879 KRTAP13-2Q52LG2 175 aa11.35□□□□□ -0.59
TMEFF1-201ENST00000374879 DNAH11Q96DT5 4516 aa11.33□□□□□ -0.6
TMEFF1-201ENST00000374879 H1FX-AS1Q4G0G2 97 aa11.32□□□□□ -0.6
TMEFF1-201ENST00000374879 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
TMEFF1-201ENST00000374879 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
TMEFF1-201ENST00000374879 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
TMEFF1-201ENST00000374879 K7ERS5 55 aa11.19□□□□□ -0.62
TMEFF1-201ENST00000374879 LRP1BQ9NZR2 4599 aa11.16□□□□□ -0.62
TMEFF1-201ENST00000374879 KRTAP3-1Q9BYR8 98 aa11.15□□□□□ -0.62
TMEFF1-201ENST00000374879 PKD1P98161 4303 aa11.11□□□□□ -0.63
TMEFF1-201ENST00000374879 SPINT4Q6UDR6 99 aa11.1□□□□□ -0.63
TMEFF1-201ENST00000374879 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
TMEFF1-201ENST00000374879 COX6B2Q6YFQ2 88 aa11.09□□□□□ -0.63
TMEFF1-201ENST00000374879 FAT2Q9NYQ8 4349 aa11.06□□□□□ -0.64
TMEFF1-201ENST00000374879 TPRXLQ17RH7 258 aa11.04□□□□□ -0.64
TMEFF1-201ENST00000374879 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
TMEFF1-201ENST00000374879 NDUFAF8A1L188 74 aa10.99□□□□□ -0.65
TMEFF1-201ENST00000374879 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
TMEFF1-201ENST00000374879 KRTAP15-1Q3LI76 137 aa10.91□□□□□ -0.66
TMEFF1-201ENST00000374879 C20orf166-AS1Q96NR2 134 aa10.91□□□□□ -0.66
TMEFF1-201ENST00000374879 C10orf95Q9H7T3 257 aa10.91□□□□□ -0.66
TMEFF1-201ENST00000374879 RPL37P61927 97 aaKnown RBP10.91□□□□□ -0.66
TMEFF1-201ENST00000374879 C9orf92A6NGG3 77 aa10.86□□□□□ -0.67
TMEFF1-201ENST00000374879 A0A0D9SG42 100 aa10.84□□□□□ -0.67
TMEFF1-201ENST00000374879 KRTAP13-4Q3LI77 160 aa10.82□□□□□ -0.68
TMEFF1-201ENST00000374879 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
TMEFF1-201ENST00000374879 KRTAP10-6P60371 365 aaPredicted RBP10.77□□□□□ -0.69
TMEFF1-201ENST00000374879 SMR3BP02814 79 aaPredicted RBP10.74□□□□□ -0.69
TMEFF1-201ENST00000374879 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms