RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 LCE2BO14633 110 aa2.6□□□□□ -1.99
ITCH-202ENST00000374864 H3BNG1 76 aa2.6□□□□□ -1.99
ITCH-202ENST00000374864 IGLV5-37A0A075B6J1 123 aa2.59□□□□□ -1.99
ITCH-202ENST00000374864 A0A1B0GU69 56 aa2.59□□□□□ -1.99
ITCH-202ENST00000374864 Q5VV11 94 aa2.59□□□□□ -1.99
ITCH-202ENST00000374864 MRPL34Q9BQ48 92 aaKnown RBP2.59□□□□□ -1.99
ITCH-202ENST00000374864 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -2
ITCH-202ENST00000374864 FLG2Q5D862 2391 aaPredicted RBP2.59□□□□□ -2
ITCH-202ENST00000374864 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -2
ITCH-202ENST00000374864 KRTAP23-1A1A580 65 aa2.59□□□□□ -2
ITCH-202ENST00000374864 SPRR4Q96PI1 79 aa2.58□□□□□ -2
ITCH-202ENST00000374864 A0A0D9SG42 100 aa2.58□□□□□ -2
ITCH-202ENST00000374864 Q5W150 140 aa2.58□□□□□ -2
ITCH-202ENST00000374864 C9orf163Q8N9P6 203 aa2.58□□□□□ -2
ITCH-202ENST00000374864 MMP24-AS1A0A0U1RRL7 71 aa2.58□□□□□ -2
ITCH-202ENST00000374864 A0A1B0GVX0 72 aa2.58□□□□□ -2
ITCH-202ENST00000374864 ATP11AUNQ6ZP68 121 aa2.58□□□□□ -2
ITCH-202ENST00000374864 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
ITCH-202ENST00000374864 TLX1NBP0CAT3 122 aa2.57□□□□□ -2
ITCH-202ENST00000374864 HRES1P13985 223 aa2.57□□□□□ -2
ITCH-202ENST00000374864 LIMD2Q9BT23 127 aa2.57□□□□□ -2
ITCH-202ENST00000374864 HECTD4Q9Y4D8 3996 aa2.57□□□□□ -2
ITCH-202ENST00000374864 DNHD1Q96M86 4753 aa2.57□□□□□ -2
ITCH-202ENST00000374864 ZNF861PO60384 105 aa2.56□□□□□ -2
ITCH-202ENST00000374864 SPRR1AP35321 89 aa2.56□□□□□ -2
ITCH-202ENST00000374864 ZNF706Q9Y5V0 76 aaPredicted RBP2.56□□□□□ -2
ITCH-202ENST00000374864 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
ITCH-202ENST00000374864 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
ITCH-202ENST00000374864 F8WDY8 70 aa2.55□□□□□ -2
ITCH-202ENST00000374864 LINC00472Q9H8W2 130 aa2.55□□□□□ -2
ITCH-202ENST00000374864 DNAH1Q9P2D7 4330 aa2.55□□□□□ -2
ITCH-202ENST00000374864 IGLV7-43P04211 117 aa2.55□□□□□ -2
ITCH-202ENST00000374864 LCA10Q71F78 164 aa2.55□□□□□ -2
ITCH-202ENST00000374864 MEGF8Q7Z7M0 2845 aa2.55□□□□□ -2
ITCH-202ENST00000374864 IGLV7-46A0A075B6I9 117 aa2.55□□□□□ -2
ITCH-202ENST00000374864 LCE2CQ5TA81 110 aa2.54□□□□□ -2
ITCH-202ENST00000374864 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
ITCH-202ENST00000374864 ACYP2P14621 99 aa2.54□□□□□ -2
ITCH-202ENST00000374864 STARD9Q9P2P6 4700 aa2.53□□□□□ -2
ITCH-202ENST00000374864 LOC101927531A0A1B0GV80 90 aa2.53□□□□□ -2
ITCH-202ENST00000374864 KRTAP10-1P60331 282 aa2.53□□□□□ -2
ITCH-202ENST00000374864 RBM12B-AS1Q9P1G2 102 aa2.53□□□□□ -2
ITCH-202ENST00000374864 VPS13DQ5THJ4 4388 aa2.53□□□□□ -2
ITCH-202ENST00000374864 Q1T7F1 81 aa2.53□□□□□ -2
ITCH-202ENST00000374864 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2
ITCH-202ENST00000374864 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
ITCH-202ENST00000374864 SSBP3-AS1Q7Z2R9 100 aa2.51□□□□□ -2.01
ITCH-202ENST00000374864 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
ITCH-202ENST00000374864 KRTAP29-1A8MX34 341 aaPredicted RBP2.51□□□□□ -2.01
ITCH-202ENST00000374864 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
ITCH-202ENST00000374864 CYP4F30PQ9H0H9 118 aa2.51□□□□□ -2.01
ITCH-202ENST00000374864 LINC01554Q52M75 96 aa2.5□□□□□ -2.01
ITCH-202ENST00000374864 CSAG1Q6PB30 78 aa2.5□□□□□ -2.01
ITCH-202ENST00000374864 ZCCHC13Q8WW36 166 aaKnown RBP2.5□□□□□ -2.01
ITCH-202ENST00000374864 TP53AIP1Q9HCN2 124 aa2.49□□□□□ -2.01
ITCH-202ENST00000374864 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
ITCH-202ENST00000374864 VPS13BQ7Z7G8 4022 aa2.49□□□□□ -2.01
ITCH-202ENST00000374864 Q6ZR54 194 aa2.49□□□□□ -2.01
ITCH-202ENST00000374864 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
ITCH-202ENST00000374864 FAT2Q9NYQ8 4349 aa2.48□□□□□ -2.01
ITCH-202ENST00000374864 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
ITCH-202ENST00000374864 DNAH3Q8TD57 4116 aa2.48□□□□□ -2.01
ITCH-202ENST00000374864 Q6ZRN7 208 aaPredicted RBP2.47□□□□□ -2.01
ITCH-202ENST00000374864 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
ITCH-202ENST00000374864 LINC00304Q8N9R0 145 aa2.47□□□□□ -2.01
ITCH-202ENST00000374864 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
ITCH-202ENST00000374864 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.01
ITCH-202ENST00000374864 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
ITCH-202ENST00000374864 Q75L30 129 aa2.46□□□□□ -2.02
ITCH-202ENST00000374864 C8orf87E5RJ46 101 aa2.45□□□□□ -2.02
ITCH-202ENST00000374864 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
ITCH-202ENST00000374864 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
ITCH-202ENST00000374864 PLAC8Q9NZF1 115 aa2.44□□□□□ -2.02
ITCH-202ENST00000374864 UQCR11O14957 56 aa2.44□□□□□ -2.02
ITCH-202ENST00000374864 H3BPC8 53 aa2.43□□□□□ -2.02
ITCH-202ENST00000374864 A0A1B0GW54 56 aa2.43□□□□□ -2.02
ITCH-202ENST00000374864 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
ITCH-202ENST00000374864 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
ITCH-202ENST00000374864 LCE6AA0A183 80 aa2.42□□□□□ -2.02
ITCH-202ENST00000374864 A6NN06 94 aa2.41□□□□□ -2.02
ITCH-202ENST00000374864 SPRR1BP22528 89 aa2.41□□□□□ -2.02
ITCH-202ENST00000374864 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.02
ITCH-202ENST00000374864 LINC00483Q53H64 154 aa2.4□□□□□ -2.02
ITCH-202ENST00000374864 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.03
ITCH-202ENST00000374864 C10orf95Q9H7T3 257 aa2.39□□□□□ -2.03
ITCH-202ENST00000374864 K7ERS5 55 aa2.39□□□□□ -2.03
ITCH-202ENST00000374864 A0A1B0GU33 70 aa2.38□□□□□ -2.03
ITCH-202ENST00000374864 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
ITCH-202ENST00000374864 FAT1Q14517 4588 aa2.37□□□□□ -2.03
ITCH-202ENST00000374864 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
ITCH-202ENST00000374864 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
ITCH-202ENST00000374864 DNAH5Q8TE73 4624 aa2.36□□□□□ -2.03
ITCH-202ENST00000374864 LPAP08519 4548 aa2.36□□□□□ -2.03
ITCH-202ENST00000374864 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
ITCH-202ENST00000374864 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
ITCH-202ENST00000374864 KRTAP16-1A8MUX0 517 aa2.35□□□□□ -2.03
ITCH-202ENST00000374864 KRTAP1-4P0C5Y4 121 aa2.34□□□□□ -2.04
ITCH-202ENST00000374864 Q5VSD8 79 aa2.34□□□□□ -2.04
ITCH-202ENST00000374864 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
ITCH-202ENST00000374864 H0YAA0 97 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms