RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
HERC4-202ENST00000373700 SPRR1BP22528 89 aa4.68□□□□□ -1.66
HERC4-202ENST00000373700 A0A1B0GU69 56 aa4.68□□□□□ -1.66
HERC4-202ENST00000373700 C8orf87E5RJ46 101 aa4.66□□□□□ -1.66
HERC4-202ENST00000373700 LINC00304Q8N9R0 145 aa4.66□□□□□ -1.66
HERC4-202ENST00000373700 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.66
HERC4-202ENST00000373700 A0A087X002 238 aa4.65□□□□□ -1.66
HERC4-202ENST00000373700 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.66
HERC4-202ENST00000373700 Q8N1X5 172 aa4.64□□□□□ -1.67
HERC4-202ENST00000373700 LCE6AA0A183 80 aa4.63□□□□□ -1.67
HERC4-202ENST00000373700 CD164Q04900 197 aa4.63□□□□□ -1.67
HERC4-202ENST00000373700 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
HERC4-202ENST00000373700 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
HERC4-202ENST00000373700 CYP4F30PQ9H0H9 118 aa4.61□□□□□ -1.67
HERC4-202ENST00000373700 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
HERC4-202ENST00000373700 IGLV7-46A0A075B6I9 117 aa4.6□□□□□ -1.67
HERC4-202ENST00000373700 HRES1P13985 223 aa4.6□□□□□ -1.67
HERC4-202ENST00000373700 Q1T7F1 81 aa4.58□□□□□ -1.68
HERC4-202ENST00000373700 K7ERS5 55 aa4.57□□□□□ -1.68
HERC4-202ENST00000373700 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
HERC4-202ENST00000373700 ZCCHC13Q8WW36 166 aaKnown RBP4.57□□□□□ -1.68
HERC4-202ENST00000373700 Q5W150 140 aa4.56□□□□□ -1.68
HERC4-202ENST00000373700 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
HERC4-202ENST00000373700 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
HERC4-202ENST00000373700 J3QL48 77 aa4.53□□□□□ -1.68
HERC4-202ENST00000373700 DNHD1Q96M86 4753 aa4.53□□□□□ -1.68
HERC4-202ENST00000373700 Q5VSD8 79 aa4.53□□□□□ -1.69
HERC4-202ENST00000373700 Q5VV11 94 aa4.53□□□□□ -1.69
HERC4-202ENST00000373700 UQCR11O14957 56 aa4.52□□□□□ -1.69
HERC4-202ENST00000373700 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
HERC4-202ENST00000373700 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
HERC4-202ENST00000373700 SPINK7P58062 85 aa4.5□□□□□ -1.69
HERC4-202ENST00000373700 KRTAP21-3Q3LHN1 58 aa4.5□□□□□ -1.69
HERC4-202ENST00000373700 A8MU10 97 aa4.49□□□□□ -1.69
HERC4-202ENST00000373700 ANK2Q01484 3957 aa4.48□□□□□ -1.69
HERC4-202ENST00000373700 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
HERC4-202ENST00000373700 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
HERC4-202ENST00000373700 Q75L30 129 aa4.45□□□□□ -1.7
HERC4-202ENST00000373700 DNAH9Q9NYC9 4486 aa4.44□□□□□ -1.7
HERC4-202ENST00000373700 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
HERC4-202ENST00000373700 A0A0D9SG42 100 aa4.43□□□□□ -1.7
HERC4-202ENST00000373700 Q6ZSA8 131 aa4.42□□□□□ -1.7
HERC4-202ENST00000373700 PRKDCP78527 4128 aaKnown RBP4.41□□□□□ -1.7
HERC4-202ENST00000373700 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
HERC4-202ENST00000373700 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
HERC4-202ENST00000373700 LCA10Q71F78 164 aa4.41□□□□□ -1.7
HERC4-202ENST00000373700 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
HERC4-202ENST00000373700 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
HERC4-202ENST00000373700 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
HERC4-202ENST00000373700 A0A1B0GU33 70 aa4.36□□□□□ -1.71
HERC4-202ENST00000373700 LYSTQ99698 3801 aa4.36□□□□□ -1.71
HERC4-202ENST00000373700 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
HERC4-202ENST00000373700 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
HERC4-202ENST00000373700 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
HERC4-202ENST00000373700 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
HERC4-202ENST00000373700 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
HERC4-202ENST00000373700 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
HERC4-202ENST00000373700 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
HERC4-202ENST00000373700 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
HERC4-202ENST00000373700 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
HERC4-202ENST00000373700 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
HERC4-202ENST00000373700 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
HERC4-202ENST00000373700 A0A1B0GVY2 172 aa4.26□□□□□ -1.73
HERC4-202ENST00000373700 CSAG1Q6PB30 78 aa4.26□□□□□ -1.73
HERC4-202ENST00000373700 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
HERC4-202ENST00000373700 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
HERC4-202ENST00000373700 S4R3F8 94 aa4.24□□□□□ -1.73
HERC4-202ENST00000373700 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
HERC4-202ENST00000373700 FAT1Q14517 4588 aa4.21□□□□□ -1.73
HERC4-202ENST00000373700 DNAH7Q8WXX0 4024 aa4.21□□□□□ -1.74
HERC4-202ENST00000373700 A6NN06 94 aa4.21□□□□□ -1.74
HERC4-202ENST00000373700 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
HERC4-202ENST00000373700 RPS29P62273 56 aaKnown RBP4.2□□□□□ -1.74
HERC4-202ENST00000373700 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
HERC4-202ENST00000373700 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
HERC4-202ENST00000373700 A8MUU9 505 aa4.18□□□□□ -1.74
HERC4-202ENST00000373700 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
HERC4-202ENST00000373700 C20orf166-AS1Q96NR2 134 aa4.16□□□□□ -1.74
HERC4-202ENST00000373700 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.75
HERC4-202ENST00000373700 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.75
HERC4-202ENST00000373700 M0R2T5 61 aa4.14□□□□□ -1.75
HERC4-202ENST00000373700 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
HERC4-202ENST00000373700 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
HERC4-202ENST00000373700 SEC61BP60468 96 aaKnown RBP4.13□□□□□ -1.75
HERC4-202ENST00000373700 XP32Q5T750 250 aa4.13□□□□□ -1.75
HERC4-202ENST00000373700 R4GN34 69 aa4.13□□□□□ -1.75
HERC4-202ENST00000373700 KRTAP10-8P60410 259 aa4.1□□□□□ -1.75
HERC4-202ENST00000373700 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
HERC4-202ENST00000373700 M0QZ58 72 aa4.1□□□□□ -1.75
HERC4-202ENST00000373700 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.76
HERC4-202ENST00000373700 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.76
HERC4-202ENST00000373700 DNAH2Q9P225 4427 aa4.09□□□□□ -1.76
HERC4-202ENST00000373700 HYDINQ4G0P3 5121 aa4.08□□□□□ -1.76
HERC4-202ENST00000373700 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
HERC4-202ENST00000373700 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
HERC4-202ENST00000373700 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
HERC4-202ENST00000373700 H0YAA0 97 aa4.07□□□□□ -1.76
HERC4-202ENST00000373700 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
HERC4-202ENST00000373700 ROMO1P60602 79 aa4.06□□□□□ -1.76
HERC4-202ENST00000373700 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms