RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 COL7A1Q02388 2944 aa5.4□□□□□ -1.54
ATG4A-203ENST00000372232 A0A087WSZ3 146 aa5.4□□□□□ -1.55
ATG4A-203ENST00000372232 SPRR1AP35321 89 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 TP53AIP1Q9HCN2 124 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
ATG4A-203ENST00000372232 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
ATG4A-203ENST00000372232 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
ATG4A-203ENST00000372232 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
ATG4A-203ENST00000372232 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
ATG4A-203ENST00000372232 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
ATG4A-203ENST00000372232 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
ATG4A-203ENST00000372232 KRTAP1-5Q9BYS1 174 aa5.36□□□□□ -1.55
ATG4A-203ENST00000372232 A0A0G2JQZ4 141 aa5.36□□□□□ -1.55
ATG4A-203ENST00000372232 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
ATG4A-203ENST00000372232 ZNF861PO60384 105 aa5.36□□□□□ -1.55
ATG4A-203ENST00000372232 DNAH10Q8IVF4 4471 aa5.35□□□□□ -1.55
ATG4A-203ENST00000372232 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
ATG4A-203ENST00000372232 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
ATG4A-203ENST00000372232 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
ATG4A-203ENST00000372232 A0A1B0GU69 56 aa5.34□□□□□ -1.55
ATG4A-203ENST00000372232 APLNQ9ULZ1 77 aa5.34□□□□□ -1.55
ATG4A-203ENST00000372232 PRKDCP78527 4128 aaKnown RBP5.34□□□□□ -1.55
ATG4A-203ENST00000372232 UQCR11O14957 56 aa5.34□□□□□ -1.56
ATG4A-203ENST00000372232 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
ATG4A-203ENST00000372232 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
ATG4A-203ENST00000372232 UBE2DNLQ8IWF7 75 aa5.32□□□□□ -1.56
ATG4A-203ENST00000372232 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
ATG4A-203ENST00000372232 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
ATG4A-203ENST00000372232 PLECQ15149 4684 aaKnown RBP5.31□□□□□ -1.56
ATG4A-203ENST00000372232 TGP01266 2768 aa5.31□□□□□ -1.56
ATG4A-203ENST00000372232 A0A096LNI7 61 aa5.3□□□□□ -1.56
ATG4A-203ENST00000372232 ACYP2P14621 99 aa5.3□□□□□ -1.56
ATG4A-203ENST00000372232 ALMS1Q8TCU4 4167 aa5.3□□□□□ -1.56
ATG4A-203ENST00000372232 P0C880 135 aa5.29□□□□□ -1.56
ATG4A-203ENST00000372232 C14orf177Q52M58 125 aa5.27□□□□□ -1.57
ATG4A-203ENST00000372232 NBDYA0A0U1RRE5 68 aa5.26□□□□□ -1.57
ATG4A-203ENST00000372232 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
ATG4A-203ENST00000372232 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
ATG4A-203ENST00000372232 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
ATG4A-203ENST00000372232 CHTF8P0CG12 524 aa5.23□□□□□ -1.57
ATG4A-203ENST00000372232 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-203ENST00000372232 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
ATG4A-203ENST00000372232 PRLHP81277 87 aa5.23□□□□□ -1.57
ATG4A-203ENST00000372232 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
ATG4A-203ENST00000372232 LINC00483Q53H64 154 aa5.21□□□□□ -1.58
ATG4A-203ENST00000372232 VPS13DQ5THJ4 4388 aa5.2□□□□□ -1.58
ATG4A-203ENST00000372232 A8MUU9 505 aa5.2□□□□□ -1.58
ATG4A-203ENST00000372232 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
ATG4A-203ENST00000372232 SPRR1BP22528 89 aa5.19□□□□□ -1.58
ATG4A-203ENST00000372232 Q96NJ1 140 aa5.19□□□□□ -1.58
ATG4A-203ENST00000372232 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
ATG4A-203ENST00000372232 PANO1I0J062 215 aa5.18□□□□□ -1.58
ATG4A-203ENST00000372232 HECTD4Q9Y4D8 3996 aa5.18□□□□□ -1.58
ATG4A-203ENST00000372232 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
ATG4A-203ENST00000372232 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
ATG4A-203ENST00000372232 IGLV7-43P04211 117 aa5.17□□□□□ -1.58
ATG4A-203ENST00000372232 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
ATG4A-203ENST00000372232 A0A087WTM6 91 aa5.15□□□□□ -1.58
ATG4A-203ENST00000372232 A0A1B0GVX0 72 aa5.15□□□□□ -1.59
ATG4A-203ENST00000372232 SPACA4Q8TDM5 124 aa5.14□□□□□ -1.59
ATG4A-203ENST00000372232 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
ATG4A-203ENST00000372232 LINC00304Q8N9R0 145 aa5.14□□□□□ -1.59
ATG4A-203ENST00000372232 KRTAP13-1Q8IUC0 172 aa5.13□□□□□ -1.59
ATG4A-203ENST00000372232 Q5W150 140 aa5.12□□□□□ -1.59
ATG4A-203ENST00000372232 KRTAP16-1A8MUX0 517 aa5.12□□□□□ -1.59
ATG4A-203ENST00000372232 C20orf166-AS1Q96NR2 134 aa5.09□□□□□ -1.59
ATG4A-203ENST00000372232 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
ATG4A-203ENST00000372232 XP32Q5T750 250 aa5.08□□□□□ -1.6
ATG4A-203ENST00000372232 FRAS1Q86XX4 4008 aa5.07□□□□□ -1.6
ATG4A-203ENST00000372232 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
ATG4A-203ENST00000372232 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
ATG4A-203ENST00000372232 DNAH8Q96JB1 4490 aa5.05□□□□□ -1.6
ATG4A-203ENST00000372232 LY6G6CO95867 125 aa5.05□□□□□ -1.6
ATG4A-203ENST00000372232 H0YAA0 97 aa5.04□□□□□ -1.6
ATG4A-203ENST00000372232 KMT2CQ8NEZ4 4911 aaKnown RBP5.03□□□□□ -1.6
ATG4A-203ENST00000372232 DNAH6Q9C0G6 4158 aa5.02□□□□□ -1.61
ATG4A-203ENST00000372232 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
ATG4A-203ENST00000372232 DNAH5Q8TE73 4624 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 Q6ZSA8 131 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 ANAPC11Q9NYG5 84 aa5□□□□□ -1.61
ATG4A-203ENST00000372232 DNAH11Q96DT5 4516 aa4.99□□□□□ -1.61
ATG4A-203ENST00000372232 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
ATG4A-203ENST00000372232 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
ATG4A-203ENST00000372232 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
ATG4A-203ENST00000372232 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
ATG4A-203ENST00000372232 SSBP3-AS1Q7Z2R9 100 aa4.97□□□□□ -1.61
ATG4A-203ENST00000372232 RYR3Q15413 4870 aa4.96□□□□□ -1.62
ATG4A-203ENST00000372232 CIRBP-AS1Q8TBR5 109 aa4.96□□□□□ -1.62
ATG4A-203ENST00000372232 RYR2Q92736 4967 aa4.95□□□□□ -1.62
ATG4A-203ENST00000372232 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
ATG4A-203ENST00000372232 PKD1P98161 4303 aa4.94□□□□□ -1.62
ATG4A-203ENST00000372232 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
ATG4A-203ENST00000372232 KRTAP10-1P60331 282 aa4.92□□□□□ -1.62
ATG4A-203ENST00000372232 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms