RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 STARD9Q9P2P6 4700 aa3.16□□□□□ -1.9
UBE3D-202ENST00000369746 SPAG11AQ6PDA7 123 aa3.15□□□□□ -1.9
UBE3D-202ENST00000369746 ST20-AS1Q8NBB2 130 aa3.15□□□□□ -1.9
UBE3D-202ENST00000369746 KRTAP4-5Q9BYR2 181 aa3.15□□□□□ -1.9
UBE3D-202ENST00000369746 A0A087WSZ3 146 aa3.15□□□□□ -1.91
UBE3D-202ENST00000369746 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.91
UBE3D-202ENST00000369746 SPRR4Q96PI1 79 aa3.14□□□□□ -1.91
UBE3D-202ENST00000369746 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 DEFB131BA0A096LNP1 70 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 Q8N9L7 120 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 DEFB104AQ8WTQ1 72 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 LINC00959A0A1B0GUT2 108 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
UBE3D-202ENST00000369746 COL7A1Q02388 2944 aa3.12□□□□□ -1.91
UBE3D-202ENST00000369746 DSCR10P59022 87 aa3.12□□□□□ -1.91
UBE3D-202ENST00000369746 TENM2Q9NT68 2774 aa3.12□□□□□ -1.91
UBE3D-202ENST00000369746 FRAS1Q86XX4 4008 aa3.12□□□□□ -1.91
UBE3D-202ENST00000369746 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
UBE3D-202ENST00000369746 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
UBE3D-202ENST00000369746 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
UBE3D-202ENST00000369746 TOMM7Q9P0U1 55 aa3.11□□□□□ -1.91
UBE3D-202ENST00000369746 PANO1I0J062 215 aa3.1□□□□□ -1.91
UBE3D-202ENST00000369746 HSPG2P98160 4391 aa3.1□□□□□ -1.91
UBE3D-202ENST00000369746 GVQW2A0A096LPI5 108 aaPredicted RBP3.09□□□□□ -1.91
UBE3D-202ENST00000369746 IGKV3-20P01619 116 aa3.09□□□□□ -1.91
UBE3D-202ENST00000369746 KLK12Q9UKR0 248 aa3.09□□□□□ -1.91
UBE3D-202ENST00000369746 IGLV10-54A0A075B6I4 117 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 UQCR11O14957 56 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 C1orf137Q5JT78 98 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 RHPN1-AS1Q9BWJ2 59 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 PRR34Q9NV39 138 aa3.09□□□□□ -1.92
UBE3D-202ENST00000369746 A0A0J9YWU9 116 aa3.08□□□□□ -1.92
UBE3D-202ENST00000369746 KRTAP26-1Q6PEX3 210 aa3.08□□□□□ -1.92
UBE3D-202ENST00000369746 Q5VSD8 79 aa3.08□□□□□ -1.92
UBE3D-202ENST00000369746 TP53AIP1Q9HCN2 124 aa3.08□□□□□ -1.92
UBE3D-202ENST00000369746 A0A1B0GUV1 79 aa3.07□□□□□ -1.92
UBE3D-202ENST00000369746 H3BNG1 76 aa3.07□□□□□ -1.92
UBE3D-202ENST00000369746 C16orf74Q96GX8 76 aa3.07□□□□□ -1.92
UBE3D-202ENST00000369746 K7EQZ3 153 aa3.07□□□□□ -1.92
UBE3D-202ENST00000369746 PRB3Q04118 309 aaPredicted RBP3.07□□□□□ -1.92
UBE3D-202ENST00000369746 Q8N377 158 aa3.07□□□□□ -1.92
UBE3D-202ENST00000369746 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
UBE3D-202ENST00000369746 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
UBE3D-202ENST00000369746 IGKV3-7A0A075B6H7 116 aa3.06□□□□□ -1.92
UBE3D-202ENST00000369746 ZNF861PO60384 105 aa3.06□□□□□ -1.92
UBE3D-202ENST00000369746 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
UBE3D-202ENST00000369746 HRES1P13985 223 aa3.05□□□□□ -1.92
UBE3D-202ENST00000369746 SPINK13Q1W4C9 94 aa3.05□□□□□ -1.92
UBE3D-202ENST00000369746 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
UBE3D-202ENST00000369746 PKD1P98161 4303 aa3.04□□□□□ -1.92
UBE3D-202ENST00000369746 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
UBE3D-202ENST00000369746 DEFB1P60022 68 aa3.04□□□□□ -1.92
UBE3D-202ENST00000369746 C10orf99Q6UWK7 81 aa3.04□□□□□ -1.92
UBE3D-202ENST00000369746 SORL1Q92673 2214 aa3.04□□□□□ -1.92
UBE3D-202ENST00000369746 CSMD3Q7Z407 3707 aa3.02□□□□□ -1.93
UBE3D-202ENST00000369746 WNK2Q9Y3S1 2297 aa3.02□□□□□ -1.93
UBE3D-202ENST00000369746 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
UBE3D-202ENST00000369746 DEFB136Q30KP8 78 aa3.01□□□□□ -1.93
UBE3D-202ENST00000369746 Q6ZSA8 131 aa3.01□□□□□ -1.93
UBE3D-202ENST00000369746 STAB2Q8WWQ8 2551 aa3□□□□□ -1.93
UBE3D-202ENST00000369746 A0A1B0GU69 56 aa3□□□□□ -1.93
UBE3D-202ENST00000369746 G3V318 75 aa3□□□□□ -1.93
UBE3D-202ENST00000369746 ACYP2P14621 99 aa3□□□□□ -1.93
UBE3D-202ENST00000369746 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
UBE3D-202ENST00000369746 DEFB131AP59861 70 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 KRTAP15-1Q3LI76 137 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 ANGP03950 147 aaKnown RBP2.99□□□□□ -1.93
UBE3D-202ENST00000369746 UBE2DNLQ8IWF7 75 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 SPART-AS1P0CW21 52 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 Q5W150 140 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 TYMSOSQ8TAI1 123 aa2.99□□□□□ -1.93
UBE3D-202ENST00000369746 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
UBE3D-202ENST00000369746 IGKV2-24A0A0C4DH68 120 aa2.98□□□□□ -1.93
UBE3D-202ENST00000369746 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
UBE3D-202ENST00000369746 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
UBE3D-202ENST00000369746 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
UBE3D-202ENST00000369746 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
UBE3D-202ENST00000369746 Q6ZRN7 208 aaPredicted RBP2.97□□□□□ -1.93
UBE3D-202ENST00000369746 WFDC10BQ8IUB3 73 aa2.96□□□□□ -1.94
UBE3D-202ENST00000369746 A0A087WTM6 91 aa2.96□□□□□ -1.94
UBE3D-202ENST00000369746 IGLV7-43P04211 117 aa2.96□□□□□ -1.94
UBE3D-202ENST00000369746 LINC00472Q9H8W2 130 aa2.96□□□□□ -1.94
UBE3D-202ENST00000369746 A0A1B0GU33 70 aa2.95□□□□□ -1.94
UBE3D-202ENST00000369746 LORP23490 312 aaPredicted RBP2.95□□□□□ -1.94
UBE3D-202ENST00000369746 KRTAP10-4P60372 401 aaPredicted RBP2.95□□□□□ -1.94
UBE3D-202ENST00000369746 MMP24-AS1A0A0U1RRL7 71 aa2.95□□□□□ -1.94
UBE3D-202ENST00000369746 SPRR1AP35321 89 aa2.95□□□□□ -1.94
UBE3D-202ENST00000369746 Q6ZRX8 168 aa2.95□□□□□ -1.94
UBE3D-202ENST00000369746 ANAPC11Q9NYG5 84 aa2.95□□□□□ -1.94
UBE3D-202ENST00000369746 FAT1Q14517 4588 aa2.94□□□□□ -1.94
UBE3D-202ENST00000369746 DEFB135Q30KP9 77 aa2.94□□□□□ -1.94
UBE3D-202ENST00000369746 UNQ6190/PRO20217Q6UXQ8 127 aa2.93□□□□□ -1.94
UBE3D-202ENST00000369746 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
UBE3D-202ENST00000369746 CLPSL2Q6UWE3 100 aa2.93□□□□□ -1.94
UBE3D-202ENST00000369746 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms