RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 HAMPP81172 84 aa6.01□□□□□ -1.45
SCNM1-202ENST00000368905 APLNQ9ULZ1 77 aa6.01□□□□□ -1.45
SCNM1-202ENST00000368905 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
SCNM1-202ENST00000368905 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
SCNM1-202ENST00000368905 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
SCNM1-202ENST00000368905 SPRR4Q96PI1 79 aa5.99□□□□□ -1.45
SCNM1-202ENST00000368905 PRKDCP78527 4128 aaKnown RBP5.98□□□□□ -1.45
SCNM1-202ENST00000368905 IGLV5-48A0A075B6I7 105 aa5.98□□□□□ -1.45
SCNM1-202ENST00000368905 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
SCNM1-202ENST00000368905 DEFB105AQ8NG35 78 aa5.98□□□□□ -1.45
SCNM1-202ENST00000368905 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
SCNM1-202ENST00000368905 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
SCNM1-202ENST00000368905 M0R2N4 97 aa5.97□□□□□ -1.45
SCNM1-202ENST00000368905 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.45
SCNM1-202ENST00000368905 KRTAP7-1Q8IUC3 87 aa5.95□□□□□ -1.46
SCNM1-202ENST00000368905 KRTAP1-5Q9BYS1 174 aa5.95□□□□□ -1.46
SCNM1-202ENST00000368905 STAB2Q8WWQ8 2551 aa5.95□□□□□ -1.46
SCNM1-202ENST00000368905 DNAH1Q9P2D7 4330 aa5.95□□□□□ -1.46
SCNM1-202ENST00000368905 A0A096LNI7 61 aa5.94□□□□□ -1.46
SCNM1-202ENST00000368905 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
SCNM1-202ENST00000368905 ST20-AS1Q8NBB2 130 aa5.94□□□□□ -1.46
SCNM1-202ENST00000368905 IGKV2-24A0A0C4DH68 120 aa5.93□□□□□ -1.46
SCNM1-202ENST00000368905 NBDYA0A0U1RRE5 68 aa5.93□□□□□ -1.46
SCNM1-202ENST00000368905 ZNF861PO60384 105 aa5.93□□□□□ -1.46
SCNM1-202ENST00000368905 COL7A1Q02388 2944 aa5.9□□□□□ -1.46
SCNM1-202ENST00000368905 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.47
SCNM1-202ENST00000368905 TYMSOSQ8TAI1 123 aa5.9□□□□□ -1.47
SCNM1-202ENST00000368905 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
SCNM1-202ENST00000368905 DYNC2H1Q8NCM8 4307 aaKnown RBP5.89□□□□□ -1.47
SCNM1-202ENST00000368905 COA5Q86WW8 74 aa5.87□□□□□ -1.47
SCNM1-202ENST00000368905 IGKV4-1P06312 121 aa5.86□□□□□ -1.47
SCNM1-202ENST00000368905 PRLHP81277 87 aa5.86□□□□□ -1.47
SCNM1-202ENST00000368905 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
SCNM1-202ENST00000368905 A0A087WTM6 91 aa5.85□□□□□ -1.47
SCNM1-202ENST00000368905 SPRR1BP22528 89 aa5.84□□□□□ -1.48
SCNM1-202ENST00000368905 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
SCNM1-202ENST00000368905 TGP01266 2768 aa5.82□□□□□ -1.48
SCNM1-202ENST00000368905 Q8N9L7 120 aa5.81□□□□□ -1.48
SCNM1-202ENST00000368905 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
SCNM1-202ENST00000368905 SPACA4Q8TDM5 124 aa5.8□□□□□ -1.48
SCNM1-202ENST00000368905 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
SCNM1-202ENST00000368905 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
SCNM1-202ENST00000368905 DNAH10Q8IVF4 4471 aa5.79□□□□□ -1.48
SCNM1-202ENST00000368905 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
SCNM1-202ENST00000368905 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
SCNM1-202ENST00000368905 DSCR10P59022 87 aa5.77□□□□□ -1.49
SCNM1-202ENST00000368905 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
SCNM1-202ENST00000368905 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
SCNM1-202ENST00000368905 RPL37AP61513 92 aaKnown RBP5.76□□□□□ -1.49
SCNM1-202ENST00000368905 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
SCNM1-202ENST00000368905 PSORS1C2Q9UIG4 136 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 LYSTQ99698 3801 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 R4GN34 69 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
SCNM1-202ENST00000368905 K7EQZ3 153 aa5.74□□□□□ -1.49
SCNM1-202ENST00000368905 Q96NJ1 140 aa5.72□□□□□ -1.49
SCNM1-202ENST00000368905 A0A1B0GU69 56 aa5.71□□□□□ -1.5
SCNM1-202ENST00000368905 A0A0G2JQZ4 141 aa5.7□□□□□ -1.5
SCNM1-202ENST00000368905 LY6G6CO95867 125 aa5.69□□□□□ -1.5
SCNM1-202ENST00000368905 LCE2BO14633 110 aa5.68□□□□□ -1.5
SCNM1-202ENST00000368905 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
SCNM1-202ENST00000368905 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
SCNM1-202ENST00000368905 LINC00304Q8N9R0 145 aa5.65□□□□□ -1.5
SCNM1-202ENST00000368905 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
SCNM1-202ENST00000368905 HECTD4Q9Y4D8 3996 aa5.63□□□□□ -1.51
SCNM1-202ENST00000368905 DNAH17Q9UFH2 4485 aa5.63□□□□□ -1.51
SCNM1-202ENST00000368905 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
SCNM1-202ENST00000368905 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
SCNM1-202ENST00000368905 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
SCNM1-202ENST00000368905 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
SCNM1-202ENST00000368905 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.51
SCNM1-202ENST00000368905 DNAH2Q9P225 4427 aa5.59□□□□□ -1.51
SCNM1-202ENST00000368905 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
SCNM1-202ENST00000368905 SSBP3-AS1Q7Z2R9 100 aa5.58□□□□□ -1.52
SCNM1-202ENST00000368905 KMT2AQ03164 3969 aa5.58□□□□□ -1.52
SCNM1-202ENST00000368905 ACYP2P14621 99 aa5.57□□□□□ -1.52
SCNM1-202ENST00000368905 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
SCNM1-202ENST00000368905 KMT2CQ8NEZ4 4911 aaKnown RBP5.55□□□□□ -1.52
SCNM1-202ENST00000368905 HYDINQ4G0P3 5121 aa5.55□□□□□ -1.52
SCNM1-202ENST00000368905 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
SCNM1-202ENST00000368905 Q6ZSA8 131 aa5.54□□□□□ -1.52
SCNM1-202ENST00000368905 ANAPC11Q9NYG5 84 aa5.53□□□□□ -1.52
SCNM1-202ENST00000368905 HRES1P13985 223 aa5.53□□□□□ -1.52
SCNM1-202ENST00000368905 RYR2Q92736 4967 aa5.52□□□□□ -1.53
SCNM1-202ENST00000368905 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
SCNM1-202ENST00000368905 DNAH8Q96JB1 4490 aa5.51□□□□□ -1.53
SCNM1-202ENST00000368905 KRTAP10-1P60331 282 aa5.5□□□□□ -1.53
SCNM1-202ENST00000368905 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
SCNM1-202ENST00000368905 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
SCNM1-202ENST00000368905 RYR3Q15413 4870 aa5.47□□□□□ -1.53
SCNM1-202ENST00000368905 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
SCNM1-202ENST00000368905 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
SCNM1-202ENST00000368905 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
SCNM1-202ENST00000368905 KRTAP13-2Q52LG2 175 aa5.41□□□□□ -1.54
SCNM1-202ENST00000368905 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
SCNM1-202ENST00000368905 PCOTHQ58A44 107 aa5.39□□□□□ -1.55
SCNM1-202ENST00000368905 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
SCNM1-202ENST00000368905 SPINK1P00995 79 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms