RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SPINK6Q6UWN8 80 aa10.49□□□□□ -0.73
CHTOP-201ENST00000368686 FAM229AH3BQW9 127 aa10.47□□□□□ -0.73
CHTOP-201ENST00000368686 PANO1I0J062 215 aa10.45□□□□□ -0.74
CHTOP-201ENST00000368686 IGKV2-30P06310 120 aa10.45□□□□□ -0.74
CHTOP-201ENST00000368686 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
CHTOP-201ENST00000368686 ANK2Q01484 3957 aa10.44□□□□□ -0.74
CHTOP-201ENST00000368686 DNAH10Q8IVF4 4471 aa10.42□□□□□ -0.74
CHTOP-201ENST00000368686 IGLV7-43P04211 117 aa10.4□□□□□ -0.74
CHTOP-201ENST00000368686 FBN1P35555 2871 aaKnown RBP10.38□□□□□ -0.75
CHTOP-201ENST00000368686 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
CHTOP-201ENST00000368686 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
CHTOP-201ENST00000368686 ANAPC11Q9NYG5 84 aa10.37□□□□□ -0.75
CHTOP-201ENST00000368686 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
CHTOP-201ENST00000368686 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
CHTOP-201ENST00000368686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
CHTOP-201ENST00000368686 IGLV5-52A0A0A0MRZ9 124 aa10.31□□□□□ -0.76
CHTOP-201ENST00000368686 PSORS1C2Q9UIG4 136 aa10.31□□□□□ -0.76
CHTOP-201ENST00000368686 KRTAP25-1Q3LHN0 102 aa10.29□□□□□ -0.76
CHTOP-201ENST00000368686 LYSTQ99698 3801 aa10.29□□□□□ -0.76
CHTOP-201ENST00000368686 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
CHTOP-201ENST00000368686 ROMO1P60602 79 aa10.27□□□□□ -0.77
CHTOP-201ENST00000368686 DNAH9Q9NYC9 4486 aa10.26□□□□□ -0.77
CHTOP-201ENST00000368686 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
CHTOP-201ENST00000368686 A8MUU9 505 aa10.25□□□□□ -0.77
CHTOP-201ENST00000368686 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
CHTOP-201ENST00000368686 LY6G6CO95867 125 aa10.22□□□□□ -0.77
CHTOP-201ENST00000368686 APLNQ9ULZ1 77 aa10.21□□□□□ -0.77
CHTOP-201ENST00000368686 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
CHTOP-201ENST00000368686 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
CHTOP-201ENST00000368686 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
CHTOP-201ENST00000368686 KRTAP24-1Q3LI83 254 aa10.17□□□□□ -0.78
CHTOP-201ENST00000368686 NBDYA0A0U1RRE5 68 aa10.17□□□□□ -0.78
CHTOP-201ENST00000368686 KRTAP16-1A8MUX0 517 aa10.17□□□□□ -0.78
CHTOP-201ENST00000368686 LINC00304Q8N9R0 145 aa10.16□□□□□ -0.78
CHTOP-201ENST00000368686 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
CHTOP-201ENST00000368686 H0YAA0 97 aa10.14□□□□□ -0.79
CHTOP-201ENST00000368686 SPINK1P00995 79 aa10.13□□□□□ -0.79
CHTOP-201ENST00000368686 Q6ZSA8 131 aa10.12□□□□□ -0.79
CHTOP-201ENST00000368686 CMYA5Q8N3K9 4069 aa10.12□□□□□ -0.79
CHTOP-201ENST00000368686 DNAH8Q96JB1 4490 aa10.1□□□□□ -0.79
CHTOP-201ENST00000368686 NBEAL1Q6ZS30 2694 aa10.06□□□□□ -0.8
CHTOP-201ENST00000368686 A0A087WTM6 91 aa10.04□□□□□ -0.8
CHTOP-201ENST00000368686 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
CHTOP-201ENST00000368686 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
CHTOP-201ENST00000368686 A0A1B0GU33 70 aa10□□□□□ -0.81
CHTOP-201ENST00000368686 Q8N1X5 172 aa10□□□□□ -0.81
CHTOP-201ENST00000368686 FRAS1Q86XX4 4008 aa9.99□□□□□ -0.81
CHTOP-201ENST00000368686 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
CHTOP-201ENST00000368686 P0C880 135 aa9.94□□□□□ -0.82
CHTOP-201ENST00000368686 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
CHTOP-201ENST00000368686 K7ERS5 55 aa9.92□□□□□ -0.82
CHTOP-201ENST00000368686 KRTAP21-3Q3LHN1 58 aa9.91□□□□□ -0.82
CHTOP-201ENST00000368686 STAB1Q9NY15 2570 aa9.91□□□□□ -0.82
CHTOP-201ENST00000368686 MEGF8Q7Z7M0 2845 aa9.9□□□□□ -0.82
CHTOP-201ENST00000368686 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
CHTOP-201ENST00000368686 NUPR2A6NF83 97 aa9.88□□□□□ -0.83
CHTOP-201ENST00000368686 DYNC2H1Q8NCM8 4307 aaKnown RBP9.88□□□□□ -0.83
CHTOP-201ENST00000368686 DNAH7Q8WXX0 4024 aa9.87□□□□□ -0.83
CHTOP-201ENST00000368686 STAB2Q8WWQ8 2551 aa9.87□□□□□ -0.83
CHTOP-201ENST00000368686 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
CHTOP-201ENST00000368686 DNAH17Q9UFH2 4485 aa9.82□□□□□ -0.84
CHTOP-201ENST00000368686 DNHD1Q96M86 4753 aa9.81□□□□□ -0.84
CHTOP-201ENST00000368686 TGP01266 2768 aa9.81□□□□□ -0.84
CHTOP-201ENST00000368686 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
CHTOP-201ENST00000368686 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
CHTOP-201ENST00000368686 VPS13DQ5THJ4 4388 aa9.74□□□□□ -0.85
CHTOP-201ENST00000368686 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
CHTOP-201ENST00000368686 SPINT4Q6UDR6 99 aa9.7□□□□□ -0.86
CHTOP-201ENST00000368686 COX6B2Q6YFQ2 88 aa9.7□□□□□ -0.86
CHTOP-201ENST00000368686 KRTAP3-1Q9BYR8 98 aa9.68□□□□□ -0.86
CHTOP-201ENST00000368686 KRTAP1-4P0C5Y4 121 aa9.65□□□□□ -0.87
CHTOP-201ENST00000368686 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
CHTOP-201ENST00000368686 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
CHTOP-201ENST00000368686 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
CHTOP-201ENST00000368686 FBN3Q75N90 2809 aa9.54□□□□□ -0.88
CHTOP-201ENST00000368686 NDUFAF8A1L188 74 aa9.54□□□□□ -0.88
CHTOP-201ENST00000368686 KRTAP15-1Q3LI76 137 aa9.54□□□□□ -0.88
CHTOP-201ENST00000368686 PRKDCP78527 4128 aaKnown RBP9.53□□□□□ -0.88
CHTOP-201ENST00000368686 MGAM2Q2M2H8 2515 aa9.53□□□□□ -0.88
CHTOP-201ENST00000368686 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
CHTOP-201ENST00000368686 RPS29P62273 56 aaKnown RBP9.51□□□□□ -0.89
CHTOP-201ENST00000368686 DNAH11Q96DT5 4516 aa9.5□□□□□ -0.89
CHTOP-201ENST00000368686 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.89
CHTOP-201ENST00000368686 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
CHTOP-201ENST00000368686 KRTAP10-2P60368 255 aa9.44□□□□□ -0.9
CHTOP-201ENST00000368686 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.9
CHTOP-201ENST00000368686 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
CHTOP-201ENST00000368686 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
CHTOP-201ENST00000368686 A0A0D9SG42 100 aa9.38□□□□□ -0.91
CHTOP-201ENST00000368686 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
CHTOP-201ENST00000368686 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
CHTOP-201ENST00000368686 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
CHTOP-201ENST00000368686 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
CHTOP-201ENST00000368686 LRP1BQ9NZR2 4599 aa9.3□□□□□ -0.92
CHTOP-201ENST00000368686 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
CHTOP-201ENST00000368686 S4R3F8 94 aa9.25□□□□□ -0.93
CHTOP-201ENST00000368686 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
CHTOP-201ENST00000368686 VPS13BQ7Z7G8 4022 aa9.19□□□□□ -0.94
CHTOP-201ENST00000368686 A0A0A0MQY5 61 aa9.16□□□□□ -0.94
CHTOP-201ENST00000368686 KRTAP12-2P59991 146 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms