RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
SMARCAL1-202ENST00000358207 KRTAP1-5Q9BYS1 174 aa5.74□□□□□ -1.49
SMARCAL1-202ENST00000358207 A0A087WSZ3 146 aa5.73□□□□□ -1.49
SMARCAL1-202ENST00000358207 Q6ZRX8 168 aa5.72□□□□□ -1.49
SMARCAL1-202ENST00000358207 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
SMARCAL1-202ENST00000358207 PRR34Q9NV39 138 aa5.72□□□□□ -1.49
SMARCAL1-202ENST00000358207 KRTAP4-16G5E9R7 235 aaPredicted RBP5.71□□□□□ -1.49
SMARCAL1-202ENST00000358207 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.49
SMARCAL1-202ENST00000358207 CAMK2N2Q96S95 79 aa5.71□□□□□ -1.5
SMARCAL1-202ENST00000358207 DHRS4-AS1Q9P1J3 65 aa5.71□□□□□ -1.5
SMARCAL1-202ENST00000358207 H3BNG1 76 aa5.7□□□□□ -1.5
SMARCAL1-202ENST00000358207 ROMO1P60602 79 aa5.7□□□□□ -1.5
SMARCAL1-202ENST00000358207 LINC01556Q5JQF7 62 aa5.7□□□□□ -1.5
SMARCAL1-202ENST00000358207 RPL37AP8A6NKH3 93 aa5.69□□□□□ -1.5
SMARCAL1-202ENST00000358207 C15orf56Q8N910 161 aa5.68□□□□□ -1.5
SMARCAL1-202ENST00000358207 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
SMARCAL1-202ENST00000358207 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
SMARCAL1-202ENST00000358207 IGKV2-24A0A0C4DH68 120 aa5.67□□□□□ -1.5
SMARCAL1-202ENST00000358207 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
SMARCAL1-202ENST00000358207 KRTAP26-1Q6PEX3 210 aa5.67□□□□□ -1.5
SMARCAL1-202ENST00000358207 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
SMARCAL1-202ENST00000358207 LY6G6CO95867 125 aa5.66□□□□□ -1.5
SMARCAL1-202ENST00000358207 A8MWP4 228 aa5.66□□□□□ -1.5
SMARCAL1-202ENST00000358207 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
SMARCAL1-202ENST00000358207 RYR1P21817 5038 aa5.65□□□□□ -1.51
SMARCAL1-202ENST00000358207 ZNF861PO60384 105 aa5.64□□□□□ -1.51
SMARCAL1-202ENST00000358207 SPRR1AP35321 89 aa5.64□□□□□ -1.51
SMARCAL1-202ENST00000358207 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
SMARCAL1-202ENST00000358207 CDK2AP2O75956 126 aa5.64□□□□□ -1.51
SMARCAL1-202ENST00000358207 REG3GQ6UW15 175 aa5.64□□□□□ -1.51
SMARCAL1-202ENST00000358207 P0C880 135 aa5.63□□□□□ -1.51
SMARCAL1-202ENST00000358207 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
SMARCAL1-202ENST00000358207 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
SMARCAL1-202ENST00000358207 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
SMARCAL1-202ENST00000358207 PKHD1P08F94 4074 aa5.62□□□□□ -1.51
SMARCAL1-202ENST00000358207 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
SMARCAL1-202ENST00000358207 DNAH8Q96JB1 4490 aa5.6□□□□□ -1.51
SMARCAL1-202ENST00000358207 CHTF8P0CG12 524 aa5.6□□□□□ -1.51
SMARCAL1-202ENST00000358207 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
SMARCAL1-202ENST00000358207 HSPG2P98160 4391 aa5.6□□□□□ -1.51
SMARCAL1-202ENST00000358207 A0A1B0GU69 56 aa5.59□□□□□ -1.51
SMARCAL1-202ENST00000358207 APOBP04114 4563 aaKnown RBP5.59□□□□□ -1.51
SMARCAL1-202ENST00000358207 NBDYA0A0U1RRE5 68 aa5.59□□□□□ -1.52
SMARCAL1-202ENST00000358207 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
SMARCAL1-202ENST00000358207 IGLV8-61A0A075B6I0 122 aa5.58□□□□□ -1.52
SMARCAL1-202ENST00000358207 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
SMARCAL1-202ENST00000358207 UQCR11O14957 56 aa5.56□□□□□ -1.52
SMARCAL1-202ENST00000358207 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
SMARCAL1-202ENST00000358207 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
SMARCAL1-202ENST00000358207 A0A096LNI7 61 aa5.54□□□□□ -1.52
SMARCAL1-202ENST00000358207 PANO1I0J062 215 aa5.53□□□□□ -1.52
SMARCAL1-202ENST00000358207 KIAA1109Q2LD37 5005 aa5.52□□□□□ -1.53
SMARCAL1-202ENST00000358207 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
SMARCAL1-202ENST00000358207 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
SMARCAL1-202ENST00000358207 ACYP2P14621 99 aa5.51□□□□□ -1.53
SMARCAL1-202ENST00000358207 Q6ZRN7 208 aaPredicted RBP5.51□□□□□ -1.53
SMARCAL1-202ENST00000358207 IGLV5-52A0A0A0MRZ9 124 aa5.51□□□□□ -1.53
SMARCAL1-202ENST00000358207 PRLHP81277 87 aa5.51□□□□□ -1.53
SMARCAL1-202ENST00000358207 A8MUU9 505 aa5.5□□□□□ -1.53
SMARCAL1-202ENST00000358207 Q8N1X5 172 aa5.5□□□□□ -1.53
SMARCAL1-202ENST00000358207 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
SMARCAL1-202ENST00000358207 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
SMARCAL1-202ENST00000358207 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
SMARCAL1-202ENST00000358207 Q96NJ1 140 aa5.49□□□□□ -1.53
SMARCAL1-202ENST00000358207 Q5W150 140 aa5.48□□□□□ -1.53
SMARCAL1-202ENST00000358207 A0A087WTM6 91 aa5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 LINC00483Q53H64 154 aa5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 NOTCH2NLQ7Z3S9 236 aa5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 KRTAP11-1Q8IUC1 163 aa5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.53
SMARCAL1-202ENST00000358207 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
SMARCAL1-202ENST00000358207 LINC00304Q8N9R0 145 aa5.44□□□□□ -1.54
SMARCAL1-202ENST00000358207 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
SMARCAL1-202ENST00000358207 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
SMARCAL1-202ENST00000358207 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
SMARCAL1-202ENST00000358207 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
SMARCAL1-202ENST00000358207 C14orf177Q52M58 125 aa5.4□□□□□ -1.54
SMARCAL1-202ENST00000358207 A0A1B0GVX0 72 aa5.4□□□□□ -1.55
SMARCAL1-202ENST00000358207 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
SMARCAL1-202ENST00000358207 SPRR1BP22528 89 aa5.38□□□□□ -1.55
SMARCAL1-202ENST00000358207 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
SMARCAL1-202ENST00000358207 Q6ZSA8 131 aa5.38□□□□□ -1.55
SMARCAL1-202ENST00000358207 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
SMARCAL1-202ENST00000358207 FAT1Q14517 4588 aa5.35□□□□□ -1.55
SMARCAL1-202ENST00000358207 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
SMARCAL1-202ENST00000358207 H0YAA0 97 aa5.34□□□□□ -1.55
SMARCAL1-202ENST00000358207 C20orf166-AS1Q96NR2 134 aa5.34□□□□□ -1.55
SMARCAL1-202ENST00000358207 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
SMARCAL1-202ENST00000358207 KRTAP10-1P60331 282 aa5.33□□□□□ -1.56
SMARCAL1-202ENST00000358207 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
SMARCAL1-202ENST00000358207 CIRBP-AS1Q8TBR5 109 aa5.31□□□□□ -1.56
SMARCAL1-202ENST00000358207 MYCBP2O75592 4640 aa5.31□□□□□ -1.56
SMARCAL1-202ENST00000358207 SMR3BP02814 79 aaPredicted RBP5.31□□□□□ -1.56
SMARCAL1-202ENST00000358207 PSORS1C2Q9UIG4 136 aa5.31□□□□□ -1.56
SMARCAL1-202ENST00000358207 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
SMARCAL1-202ENST00000358207 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
SMARCAL1-202ENST00000358207 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
SMARCAL1-202ENST00000358207 Q5VSD8 79 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms