RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
RNF40-202ENST00000357890 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
RNF40-202ENST00000357890 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
RNF40-202ENST00000357890 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
RNF40-202ENST00000357890 KRTAP11-1Q8IUC1 163 aa6.09□□□□□ -1.43
RNF40-202ENST00000357890 COL7A1Q02388 2944 aa6.08□□□□□ -1.44
RNF40-202ENST00000357890 LYSTQ99698 3801 aa6.07□□□□□ -1.44
RNF40-202ENST00000357890 SPRR1BP22528 89 aa6.06□□□□□ -1.44
RNF40-202ENST00000357890 RTL8CO15255 209 aa6.05□□□□□ -1.44
RNF40-202ENST00000357890 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
RNF40-202ENST00000357890 PANO1I0J062 215 aa6.04□□□□□ -1.44
RNF40-202ENST00000357890 IGLV5-52A0A0A0MRZ9 124 aa6.03□□□□□ -1.44
RNF40-202ENST00000357890 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
RNF40-202ENST00000357890 A0A087X002 238 aa6.01□□□□□ -1.45
RNF40-202ENST00000357890 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
RNF40-202ENST00000357890 A0A087WTM6 91 aa6.01□□□□□ -1.45
RNF40-202ENST00000357890 LY6G6CO95867 125 aa6□□□□□ -1.45
RNF40-202ENST00000357890 K7ERS5 55 aa6□□□□□ -1.45
RNF40-202ENST00000357890 C1orf134Q5TEV5 83 aa6□□□□□ -1.45
RNF40-202ENST00000357890 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
RNF40-202ENST00000357890 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
RNF40-202ENST00000357890 DNAH10Q8IVF4 4471 aa5.98□□□□□ -1.45
RNF40-202ENST00000357890 ZNF861PO60384 105 aa5.98□□□□□ -1.45
RNF40-202ENST00000357890 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
RNF40-202ENST00000357890 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
RNF40-202ENST00000357890 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
RNF40-202ENST00000357890 Q5W150 140 aa5.96□□□□□ -1.46
RNF40-202ENST00000357890 Q6ZR54 194 aa5.95□□□□□ -1.46
RNF40-202ENST00000357890 Q8N1X5 172 aa5.94□□□□□ -1.46
RNF40-202ENST00000357890 PLA2G1BP04054 148 aaKnown RBP5.94□□□□□ -1.46
RNF40-202ENST00000357890 Q6ZRN7 208 aaPredicted RBP5.94□□□□□ -1.46
RNF40-202ENST00000357890 TGP01266 2768 aa5.92□□□□□ -1.46
RNF40-202ENST00000357890 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
RNF40-202ENST00000357890 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
RNF40-202ENST00000357890 LINC00483Q53H64 154 aa5.9□□□□□ -1.47
RNF40-202ENST00000357890 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
RNF40-202ENST00000357890 IGLV7-43P04211 117 aa5.89□□□□□ -1.47
RNF40-202ENST00000357890 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
RNF40-202ENST00000357890 Q96NJ1 140 aa5.87□□□□□ -1.47
RNF40-202ENST00000357890 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
RNF40-202ENST00000357890 HUWE1Q7Z6Z7 4374 aaKnown RBP5.85□□□□□ -1.47
RNF40-202ENST00000357890 DNAH9Q9NYC9 4486 aa5.82□□□□□ -1.48
RNF40-202ENST00000357890 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
RNF40-202ENST00000357890 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
RNF40-202ENST00000357890 CMYA5Q8N3K9 4069 aa5.79□□□□□ -1.48
RNF40-202ENST00000357890 A0A1B0GU33 70 aa5.76□□□□□ -1.49
RNF40-202ENST00000357890 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
RNF40-202ENST00000357890 A0A0D9SG42 100 aa5.76□□□□□ -1.49
RNF40-202ENST00000357890 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
RNF40-202ENST00000357890 FBN3Q75N90 2809 aa5.75□□□□□ -1.49
RNF40-202ENST00000357890 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
RNF40-202ENST00000357890 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
RNF40-202ENST00000357890 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
RNF40-202ENST00000357890 DNAH3Q8TD57 4116 aa5.72□□□□□ -1.49
RNF40-202ENST00000357890 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.49
RNF40-202ENST00000357890 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
RNF40-202ENST00000357890 ROMO1P60602 79 aa5.71□□□□□ -1.5
RNF40-202ENST00000357890 KRTAP10-1P60331 282 aa5.66□□□□□ -1.5
RNF40-202ENST00000357890 A8MUU9 505 aa5.64□□□□□ -1.51
RNF40-202ENST00000357890 SMR3BP02814 79 aaPredicted RBP5.64□□□□□ -1.51
RNF40-202ENST00000357890 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
RNF40-202ENST00000357890 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
RNF40-202ENST00000357890 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
RNF40-202ENST00000357890 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
RNF40-202ENST00000357890 Q6ZSA8 131 aa5.59□□□□□ -1.51
RNF40-202ENST00000357890 NDUFAF8A1L188 74 aa5.59□□□□□ -1.52
RNF40-202ENST00000357890 H0YAA0 97 aa5.57□□□□□ -1.52
RNF40-202ENST00000357890 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
RNF40-202ENST00000357890 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
RNF40-202ENST00000357890 KMT2AQ03164 3969 aa5.53□□□□□ -1.52
RNF40-202ENST00000357890 VPS13DQ5THJ4 4388 aa5.53□□□□□ -1.52
RNF40-202ENST00000357890 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
RNF40-202ENST00000357890 DNHD1Q96M86 4753 aa5.52□□□□□ -1.53
RNF40-202ENST00000357890 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
RNF40-202ENST00000357890 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
RNF40-202ENST00000357890 DYNC2H1Q8NCM8 4307 aaKnown RBP5.49□□□□□ -1.53
RNF40-202ENST00000357890 KRTAP16-1A8MUX0 517 aa5.49□□□□□ -1.53
RNF40-202ENST00000357890 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
RNF40-202ENST00000357890 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
RNF40-202ENST00000357890 HECTD4Q9Y4D8 3996 aa5.47□□□□□ -1.53
RNF40-202ENST00000357890 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.54
RNF40-202ENST00000357890 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
RNF40-202ENST00000357890 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
RNF40-202ENST00000357890 RPS29P62273 56 aaKnown RBP5.44□□□□□ -1.54
RNF40-202ENST00000357890 PRKDCP78527 4128 aaKnown RBP5.43□□□□□ -1.54
RNF40-202ENST00000357890 P0C880 135 aa5.41□□□□□ -1.54
RNF40-202ENST00000357890 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
RNF40-202ENST00000357890 DNAH11Q96DT5 4516 aa5.38□□□□□ -1.55
RNF40-202ENST00000357890 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
RNF40-202ENST00000357890 A0A1B0GVY2 172 aa5.34□□□□□ -1.55
RNF40-202ENST00000357890 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
RNF40-202ENST00000357890 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
RNF40-202ENST00000357890 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
RNF40-202ENST00000357890 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
RNF40-202ENST00000357890 S4R3F8 94 aa5.28□□□□□ -1.56
RNF40-202ENST00000357890 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
RNF40-202ENST00000357890 DNAH5Q8TE73 4624 aa5.26□□□□□ -1.57
RNF40-202ENST00000357890 Q5VSD8 79 aa5.23□□□□□ -1.57
RNF40-202ENST00000357890 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
RNF40-202ENST00000357890 HYDINQ4G0P3 5121 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms