RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MEGF8Q7Z7M0 2845 aa6.39□□□□□ -1.39
CAPN3-203ENST00000349748 Q5W150 140 aa6.39□□□□□ -1.39
CAPN3-203ENST00000349748 Q96NJ1 140 aa6.39□□□□□ -1.39
CAPN3-203ENST00000349748 P0C880 135 aa6.36□□□□□ -1.39
CAPN3-203ENST00000349748 TGP01266 2768 aa6.36□□□□□ -1.39
CAPN3-203ENST00000349748 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
CAPN3-203ENST00000349748 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
CAPN3-203ENST00000349748 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
CAPN3-203ENST00000349748 STAB2Q8WWQ8 2551 aa6.35□□□□□ -1.39
CAPN3-203ENST00000349748 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
CAPN3-203ENST00000349748 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-203ENST00000349748 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
CAPN3-203ENST00000349748 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
CAPN3-203ENST00000349748 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
CAPN3-203ENST00000349748 FBN3Q75N90 2809 aa6.33□□□□□ -1.4
CAPN3-203ENST00000349748 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
CAPN3-203ENST00000349748 LINC01556Q5JQF7 62 aa6.31□□□□□ -1.4
CAPN3-203ENST00000349748 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
CAPN3-203ENST00000349748 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
CAPN3-203ENST00000349748 PRKDCP78527 4128 aaKnown RBP6.3□□□□□ -1.4
CAPN3-203ENST00000349748 IGLV9-49A0A0B4J1Y8 123 aa6.3□□□□□ -1.4
CAPN3-203ENST00000349748 H3BNG1 76 aa6.3□□□□□ -1.4
CAPN3-203ENST00000349748 IGLV5-52A0A0A0MRZ9 124 aa6.29□□□□□ -1.4
CAPN3-203ENST00000349748 SPRR1BP22528 89 aa6.29□□□□□ -1.4
CAPN3-203ENST00000349748 A8MUU9 505 aa6.28□□□□□ -1.4
CAPN3-203ENST00000349748 CDK2AP2O75956 126 aa6.28□□□□□ -1.4
CAPN3-203ENST00000349748 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
CAPN3-203ENST00000349748 DNAH3Q8TD57 4116 aa6.28□□□□□ -1.4
CAPN3-203ENST00000349748 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
CAPN3-203ENST00000349748 LYSTQ99698 3801 aa6.27□□□□□ -1.41
CAPN3-203ENST00000349748 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
CAPN3-203ENST00000349748 HUWE1Q7Z6Z7 4374 aaKnown RBP6.24□□□□□ -1.41
CAPN3-203ENST00000349748 IGLV7-43P04211 117 aa6.23□□□□□ -1.41
CAPN3-203ENST00000349748 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
CAPN3-203ENST00000349748 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.41
CAPN3-203ENST00000349748 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
CAPN3-203ENST00000349748 DNAH9Q9NYC9 4486 aa6.21□□□□□ -1.42
CAPN3-203ENST00000349748 SPINK1P00995 79 aa6.17□□□□□ -1.42
CAPN3-203ENST00000349748 H0YAA0 97 aa6.16□□□□□ -1.42
CAPN3-203ENST00000349748 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
CAPN3-203ENST00000349748 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
CAPN3-203ENST00000349748 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
CAPN3-203ENST00000349748 UBE2DNLQ8IWF7 75 aa6.12□□□□□ -1.43
CAPN3-203ENST00000349748 Q6ZSA8 131 aa6.12□□□□□ -1.43
CAPN3-203ENST00000349748 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
CAPN3-203ENST00000349748 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
CAPN3-203ENST00000349748 KRTAP1-5Q9BYS1 174 aa6.1□□□□□ -1.43
CAPN3-203ENST00000349748 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
CAPN3-203ENST00000349748 NUPR2A6NF83 97 aa6.09□□□□□ -1.44
CAPN3-203ENST00000349748 LCE2BO14633 110 aa6.09□□□□□ -1.44
CAPN3-203ENST00000349748 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
CAPN3-203ENST00000349748 APLNQ9ULZ1 77 aa6.08□□□□□ -1.44
CAPN3-203ENST00000349748 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
CAPN3-203ENST00000349748 FRAS1Q86XX4 4008 aa6.07□□□□□ -1.44
CAPN3-203ENST00000349748 LY6G6CO95867 125 aa6.06□□□□□ -1.44
CAPN3-203ENST00000349748 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
CAPN3-203ENST00000349748 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
CAPN3-203ENST00000349748 PSORS1C2Q9UIG4 136 aa6.06□□□□□ -1.44
CAPN3-203ENST00000349748 WWC2-AS2Q96NR7 200 aa6.05□□□□□ -1.44
CAPN3-203ENST00000349748 PANO1I0J062 215 aa6.05□□□□□ -1.44
CAPN3-203ENST00000349748 PLECQ15149 4684 aaKnown RBP6.04□□□□□ -1.44
CAPN3-203ENST00000349748 A0A087WTM6 91 aa6.03□□□□□ -1.44
CAPN3-203ENST00000349748 C14orf177Q52M58 125 aa6.03□□□□□ -1.44
CAPN3-203ENST00000349748 STARD9Q9P2P6 4700 aa6.03□□□□□ -1.44
CAPN3-203ENST00000349748 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
CAPN3-203ENST00000349748 LCE2CQ5TA81 110 aa6.01□□□□□ -1.45
CAPN3-203ENST00000349748 Q8N1X5 172 aa6.01□□□□□ -1.45
CAPN3-203ENST00000349748 DYNC2H1Q8NCM8 4307 aaKnown RBP6□□□□□ -1.45
CAPN3-203ENST00000349748 A0A1B0GU33 70 aa5.99□□□□□ -1.45
CAPN3-203ENST00000349748 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
CAPN3-203ENST00000349748 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
CAPN3-203ENST00000349748 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.46
CAPN3-203ENST00000349748 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
CAPN3-203ENST00000349748 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
CAPN3-203ENST00000349748 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
CAPN3-203ENST00000349748 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
CAPN3-203ENST00000349748 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
CAPN3-203ENST00000349748 C10orf95Q9H7T3 257 aa5.91□□□□□ -1.46
CAPN3-203ENST00000349748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-203ENST00000349748 K7ERS5 55 aa5.9□□□□□ -1.46
CAPN3-203ENST00000349748 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-203ENST00000349748 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.47
CAPN3-203ENST00000349748 KMT2CQ8NEZ4 4911 aaKnown RBP5.89□□□□□ -1.47
CAPN3-203ENST00000349748 KMT2AQ03164 3969 aa5.89□□□□□ -1.47
CAPN3-203ENST00000349748 VPS13DQ5THJ4 4388 aa5.89□□□□□ -1.47
CAPN3-203ENST00000349748 DNAH2Q9P225 4427 aa5.88□□□□□ -1.47
CAPN3-203ENST00000349748 Q6ZRN7 208 aaPredicted RBP5.85□□□□□ -1.47
CAPN3-203ENST00000349748 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
CAPN3-203ENST00000349748 SPACA4Q8TDM5 124 aa5.83□□□□□ -1.48
CAPN3-203ENST00000349748 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
CAPN3-203ENST00000349748 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
CAPN3-203ENST00000349748 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
CAPN3-203ENST00000349748 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
CAPN3-203ENST00000349748 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
CAPN3-203ENST00000349748 RYR3Q15413 4870 aa5.75□□□□□ -1.49
CAPN3-203ENST00000349748 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
CAPN3-203ENST00000349748 A0A0D9SG42 100 aa5.75□□□□□ -1.49
CAPN3-203ENST00000349748 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
CAPN3-203ENST00000349748 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
CAPN3-203ENST00000349748 RYR2Q92736 4967 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms