RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
HPS4-201ENST00000336873 DNAH8Q96JB1 4490 aa5.04□□□□□ -1.6
HPS4-201ENST00000336873 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
HPS4-201ENST00000336873 PLECQ15149 4684 aaKnown RBP5.04□□□□□ -1.6
HPS4-201ENST00000336873 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
HPS4-201ENST00000336873 H3BPC8 53 aa5.03□□□□□ -1.6
HPS4-201ENST00000336873 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
HPS4-201ENST00000336873 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
HPS4-201ENST00000336873 DYNC2H1Q8NCM8 4307 aaKnown RBP5.02□□□□□ -1.61
HPS4-201ENST00000336873 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
HPS4-201ENST00000336873 ZNF861PO60384 105 aa5.02□□□□□ -1.61
HPS4-201ENST00000336873 C8orf17Q9NRJ1 99 aa5.02□□□□□ -1.61
HPS4-201ENST00000336873 A0A087X002 238 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 NOTCH2NLQ7Z3S9 236 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 PRR26Q8N8Z3 221 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 LINC00313P59037 77 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 COA5Q86WW8 74 aa5.01□□□□□ -1.61
HPS4-201ENST00000336873 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
HPS4-201ENST00000336873 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
HPS4-201ENST00000336873 PRKDCP78527 4128 aaKnown RBP4.99□□□□□ -1.61
HPS4-201ENST00000336873 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
HPS4-201ENST00000336873 PLA2G1BP04054 148 aaKnown RBP4.98□□□□□ -1.61
HPS4-201ENST00000336873 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
HPS4-201ENST00000336873 STARD9Q9P2P6 4700 aa4.98□□□□□ -1.61
HPS4-201ENST00000336873 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
HPS4-201ENST00000336873 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
HPS4-201ENST00000336873 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
HPS4-201ENST00000336873 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
HPS4-201ENST00000336873 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
HPS4-201ENST00000336873 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
HPS4-201ENST00000336873 A6NN06 94 aa4.95□□□□□ -1.62
HPS4-201ENST00000336873 Q75L30 129 aa4.95□□□□□ -1.62
HPS4-201ENST00000336873 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
HPS4-201ENST00000336873 Q96NJ1 140 aa4.94□□□□□ -1.62
HPS4-201ENST00000336873 TYMSOSQ8TAI1 123 aa4.93□□□□□ -1.62
HPS4-201ENST00000336873 SPANXA2-OT1Q8N9U9 137 aa4.93□□□□□ -1.62
HPS4-201ENST00000336873 SPINK7P58062 85 aa4.91□□□□□ -1.62
HPS4-201ENST00000336873 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
HPS4-201ENST00000336873 Q8N1X5 172 aa4.91□□□□□ -1.62
HPS4-201ENST00000336873 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
HPS4-201ENST00000336873 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
HPS4-201ENST00000336873 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
HPS4-201ENST00000336873 Q5W150 140 aa4.88□□□□□ -1.63
HPS4-201ENST00000336873 SPRR1BP22528 89 aa4.88□□□□□ -1.63
HPS4-201ENST00000336873 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
HPS4-201ENST00000336873 A0A1B0GU69 56 aa4.87□□□□□ -1.63
HPS4-201ENST00000336873 KRTAP10-1P60331 282 aa4.87□□□□□ -1.63
HPS4-201ENST00000336873 LCE6AA0A183 80 aa4.86□□□□□ -1.63
HPS4-201ENST00000336873 ACYP2P14621 99 aa4.86□□□□□ -1.63
HPS4-201ENST00000336873 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
HPS4-201ENST00000336873 HRES1P13985 223 aa4.84□□□□□ -1.63
HPS4-201ENST00000336873 PLAC8Q9NZF1 115 aa4.84□□□□□ -1.63
HPS4-201ENST00000336873 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
HPS4-201ENST00000336873 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
HPS4-201ENST00000336873 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
HPS4-201ENST00000336873 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
HPS4-201ENST00000336873 FAM229AH3BQW9 127 aa4.81□□□□□ -1.64
HPS4-201ENST00000336873 Q6ZR54 194 aa4.81□□□□□ -1.64
HPS4-201ENST00000336873 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
HPS4-201ENST00000336873 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
HPS4-201ENST00000336873 HYDINQ4G0P3 5121 aa4.79□□□□□ -1.64
HPS4-201ENST00000336873 LINC00304Q8N9R0 145 aa4.79□□□□□ -1.64
HPS4-201ENST00000336873 PKD1P98161 4303 aa4.78□□□□□ -1.64
HPS4-201ENST00000336873 UQCR11O14957 56 aa4.78□□□□□ -1.64
HPS4-201ENST00000336873 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
HPS4-201ENST00000336873 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
HPS4-201ENST00000336873 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
HPS4-201ENST00000336873 KRTAP13-2Q52LG2 175 aa4.75□□□□□ -1.65
HPS4-201ENST00000336873 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
HPS4-201ENST00000336873 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
HPS4-201ENST00000336873 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
HPS4-201ENST00000336873 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
HPS4-201ENST00000336873 K7ERS5 55 aa4.72□□□□□ -1.65
HPS4-201ENST00000336873 PKHD1P08F94 4074 aa4.71□□□□□ -1.66
HPS4-201ENST00000336873 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
HPS4-201ENST00000336873 A0A0D9SG42 100 aa4.68□□□□□ -1.66
HPS4-201ENST00000336873 ROMO1P60602 79 aa4.64□□□□□ -1.67
HPS4-201ENST00000336873 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
HPS4-201ENST00000336873 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
HPS4-201ENST00000336873 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
HPS4-201ENST00000336873 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
HPS4-201ENST00000336873 KRTAP1-4P0C5Y4 121 aa4.59□□□□□ -1.67
HPS4-201ENST00000336873 SACSQ9NZJ4 4579 aa4.57□□□□□ -1.68
HPS4-201ENST00000336873 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
HPS4-201ENST00000336873 FAT1Q14517 4588 aa4.57□□□□□ -1.68
HPS4-201ENST00000336873 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
HPS4-201ENST00000336873 A0A1B0GU33 70 aa4.54□□□□□ -1.68
HPS4-201ENST00000336873 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
HPS4-201ENST00000336873 Q6ZSA8 131 aa4.52□□□□□ -1.69
HPS4-201ENST00000336873 Q5VSD8 79 aa4.51□□□□□ -1.69
HPS4-201ENST00000336873 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
HPS4-201ENST00000336873 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
HPS4-201ENST00000336873 J3QL48 77 aa4.49□□□□□ -1.69
HPS4-201ENST00000336873 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
HPS4-201ENST00000336873 A8MUU9 505 aa4.48□□□□□ -1.69
HPS4-201ENST00000336873 HSPG2P98160 4391 aa4.46□□□□□ -1.7
HPS4-201ENST00000336873 LPAP08519 4548 aa4.44□□□□□ -1.7
HPS4-201ENST00000336873 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
HPS4-201ENST00000336873 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms