RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
LIMK2-202ENST00000333611 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
LIMK2-202ENST00000333611 PANO1I0J062 215 aa7.18□□□□□ -1.26
LIMK2-202ENST00000333611 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
LIMK2-202ENST00000333611 A0A087X002 238 aa7.16□□□□□ -1.26
LIMK2-202ENST00000333611 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
LIMK2-202ENST00000333611 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.26
LIMK2-202ENST00000333611 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
LIMK2-202ENST00000333611 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
LIMK2-202ENST00000333611 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
LIMK2-202ENST00000333611 LYSTQ99698 3801 aa7.12□□□□□ -1.27
LIMK2-202ENST00000333611 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
LIMK2-202ENST00000333611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
LIMK2-202ENST00000333611 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
LIMK2-202ENST00000333611 Q5W150 140 aa7.1□□□□□ -1.27
LIMK2-202ENST00000333611 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
LIMK2-202ENST00000333611 CIRBP-AS1Q8TBR5 109 aa7.06□□□□□ -1.28
LIMK2-202ENST00000333611 APLNQ9ULZ1 77 aa7.06□□□□□ -1.28
LIMK2-202ENST00000333611 TGP01266 2768 aa7.06□□□□□ -1.28
LIMK2-202ENST00000333611 NBDYA0A0U1RRE5 68 aa7.06□□□□□ -1.28
LIMK2-202ENST00000333611 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
LIMK2-202ENST00000333611 ROMO1P60602 79 aa7.05□□□□□ -1.28
LIMK2-202ENST00000333611 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
LIMK2-202ENST00000333611 SPRR1BP22528 89 aa7.04□□□□□ -1.28
LIMK2-202ENST00000333611 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.29
LIMK2-202ENST00000333611 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
LIMK2-202ENST00000333611 ZNF861PO60384 105 aa6.99□□□□□ -1.29
LIMK2-202ENST00000333611 Q96NJ1 140 aa6.99□□□□□ -1.29
LIMK2-202ENST00000333611 Q8N1X5 172 aa6.97□□□□□ -1.29
LIMK2-202ENST00000333611 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
LIMK2-202ENST00000333611 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
LIMK2-202ENST00000333611 CMYA5Q8N3K9 4069 aa6.95□□□□□ -1.3
LIMK2-202ENST00000333611 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
LIMK2-202ENST00000333611 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
LIMK2-202ENST00000333611 A0A087WTM6 91 aa6.94□□□□□ -1.3
LIMK2-202ENST00000333611 FBN3Q75N90 2809 aa6.94□□□□□ -1.3
LIMK2-202ENST00000333611 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
LIMK2-202ENST00000333611 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
LIMK2-202ENST00000333611 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
LIMK2-202ENST00000333611 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
LIMK2-202ENST00000333611 NUPR2A6NF83 97 aa6.91□□□□□ -1.3
LIMK2-202ENST00000333611 A8MUU9 505 aa6.91□□□□□ -1.3
LIMK2-202ENST00000333611 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
LIMK2-202ENST00000333611 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
LIMK2-202ENST00000333611 K7ERS5 55 aa6.89□□□□□ -1.31
LIMK2-202ENST00000333611 DNAH7Q8WXX0 4024 aa6.87□□□□□ -1.31
LIMK2-202ENST00000333611 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
LIMK2-202ENST00000333611 LY6G6CO95867 125 aa6.86□□□□□ -1.31
LIMK2-202ENST00000333611 IGLV7-43P04211 117 aa6.86□□□□□ -1.31
LIMK2-202ENST00000333611 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
LIMK2-202ENST00000333611 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
LIMK2-202ENST00000333611 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
LIMK2-202ENST00000333611 LINC00483Q53H64 154 aa6.85□□□□□ -1.31
LIMK2-202ENST00000333611 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.32
LIMK2-202ENST00000333611 P0C880 135 aa6.83□□□□□ -1.32
LIMK2-202ENST00000333611 DNAH3Q8TD57 4116 aa6.81□□□□□ -1.32
LIMK2-202ENST00000333611 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
LIMK2-202ENST00000333611 A0A0D9SG42 100 aa6.78□□□□□ -1.32
LIMK2-202ENST00000333611 A0A1B0GU33 70 aa6.77□□□□□ -1.33
LIMK2-202ENST00000333611 H0YAA0 97 aa6.74□□□□□ -1.33
LIMK2-202ENST00000333611 DNAH8Q96JB1 4490 aa6.73□□□□□ -1.33
LIMK2-202ENST00000333611 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
LIMK2-202ENST00000333611 Q6ZSA8 131 aa6.73□□□□□ -1.33
LIMK2-202ENST00000333611 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
LIMK2-202ENST00000333611 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
LIMK2-202ENST00000333611 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
LIMK2-202ENST00000333611 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
LIMK2-202ENST00000333611 KMT2AQ03164 3969 aa6.68□□□□□ -1.34
LIMK2-202ENST00000333611 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
LIMK2-202ENST00000333611 KRTAP13-2Q52LG2 175 aa6.66□□□□□ -1.34
LIMK2-202ENST00000333611 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.35
LIMK2-202ENST00000333611 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.35
LIMK2-202ENST00000333611 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
LIMK2-202ENST00000333611 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
LIMK2-202ENST00000333611 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
LIMK2-202ENST00000333611 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
LIMK2-202ENST00000333611 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
LIMK2-202ENST00000333611 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
LIMK2-202ENST00000333611 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
LIMK2-202ENST00000333611 DNAH2Q9P225 4427 aa6.57□□□□□ -1.36
LIMK2-202ENST00000333611 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
LIMK2-202ENST00000333611 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
LIMK2-202ENST00000333611 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
LIMK2-202ENST00000333611 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
LIMK2-202ENST00000333611 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
LIMK2-202ENST00000333611 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
LIMK2-202ENST00000333611 KRTAP1-4P0C5Y4 121 aa6.48□□□□□ -1.37
LIMK2-202ENST00000333611 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
LIMK2-202ENST00000333611 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
LIMK2-202ENST00000333611 ALMS1Q8TCU4 4167 aa6.45□□□□□ -1.38
LIMK2-202ENST00000333611 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
LIMK2-202ENST00000333611 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
LIMK2-202ENST00000333611 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
LIMK2-202ENST00000333611 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
LIMK2-202ENST00000333611 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
LIMK2-202ENST00000333611 FAT1Q14517 4588 aa6.26□□□□□ -1.41
LIMK2-202ENST00000333611 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
LIMK2-202ENST00000333611 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
LIMK2-202ENST00000333611 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
LIMK2-202ENST00000333611 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms