RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 IGKV4-1P06312 121 aa9.12□□□□□ -0.95
LINC00476-201ENST00000321517 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
LINC00476-201ENST00000321517 FAM240AA0A1B0GVK7 77 aa9.1□□□□□ -0.95
LINC00476-201ENST00000321517 SIGMAR1Q99720 223 aa9.1□□□□□ -0.95
LINC00476-201ENST00000321517 NDUFB1O75438 58 aa9.08□□□□□ -0.96
LINC00476-201ENST00000321517 J3QR89 54 aa9.06□□□□□ -0.96
LINC00476-201ENST00000321517 Q6ZVQ6 151 aa9.06□□□□□ -0.96
LINC00476-201ENST00000321517 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
LINC00476-201ENST00000321517 A8MWP4 228 aa9.04□□□□□ -0.96
LINC00476-201ENST00000321517 DEFB116Q30KQ4 102 aa9.04□□□□□ -0.96
LINC00476-201ENST00000321517 C8orf87E5RJ46 101 aa9.03□□□□□ -0.96
LINC00476-201ENST00000321517 BPY2O14599 106 aa9.03□□□□□ -0.96
LINC00476-201ENST00000321517 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
LINC00476-201ENST00000321517 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
LINC00476-201ENST00000321517 XP32Q5T750 250 aa9.01□□□□□ -0.97
LINC00476-201ENST00000321517 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
LINC00476-201ENST00000321517 LINC00313P59037 77 aa9□□□□□ -0.97
LINC00476-201ENST00000321517 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
LINC00476-201ENST00000321517 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
LINC00476-201ENST00000321517 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
LINC00476-201ENST00000321517 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
LINC00476-201ENST00000321517 CXCL6P80162 114 aa8.96□□□□□ -0.98
LINC00476-201ENST00000321517 KRTAP19-2Q3LHN2 52 aa8.96□□□□□ -0.98
LINC00476-201ENST00000321517 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
LINC00476-201ENST00000321517 DSCR10P59022 87 aa8.95□□□□□ -0.98
LINC00476-201ENST00000321517 ATP5EP2Q5VTU8 51 aa8.94□□□□□ -0.98
LINC00476-201ENST00000321517 Q75L30 129 aa8.92□□□□□ -0.98
LINC00476-201ENST00000321517 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
LINC00476-201ENST00000321517 K7ERU9 68 aa8.9□□□□□ -0.98
LINC00476-201ENST00000321517 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
LINC00476-201ENST00000321517 K7EQZ3 153 aa8.89□□□□□ -0.99
LINC00476-201ENST00000321517 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
LINC00476-201ENST00000321517 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
LINC00476-201ENST00000321517 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
LINC00476-201ENST00000321517 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
LINC00476-201ENST00000321517 A8MUU9 505 aa8.87□□□□□ -0.99
LINC00476-201ENST00000321517 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
LINC00476-201ENST00000321517 MT1HP80294 61 aa8.85□□□□□ -0.99
LINC00476-201ENST00000321517 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
LINC00476-201ENST00000321517 TMEM254Q8TBM7 123 aa8.84□□□□□ -0.99
LINC00476-201ENST00000321517 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
LINC00476-201ENST00000321517 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
LINC00476-201ENST00000321517 hDV103S1A0JD37 113 aa8.83□□□□□ -1
LINC00476-201ENST00000321517 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
LINC00476-201ENST00000321517 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
LINC00476-201ENST00000321517 Q8N9L7 120 aa8.8□□□□□ -1
LINC00476-201ENST00000321517 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
LINC00476-201ENST00000321517 HCG22E2RYF7 251 aa8.78□□□□□ -1
LINC00476-201ENST00000321517 CASC2Q6XLA1 102 aa8.78□□□□□ -1
LINC00476-201ENST00000321517 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
LINC00476-201ENST00000321517 HIST1H4AP62805 103 aaKnown RBP8.72□□□□□ -1.01
LINC00476-201ENST00000321517 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
LINC00476-201ENST00000321517 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.02
LINC00476-201ENST00000321517 FLGP20930 4061 aaPredicted RBP8.71□□□□□ -1.02
LINC00476-201ENST00000321517 ZCCHC13Q8WW36 166 aaKnown RBP8.69□□□□□ -1.02
LINC00476-201ENST00000321517 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
LINC00476-201ENST00000321517 NDUFS5O43920 106 aa8.68□□□□□ -1.02
LINC00476-201ENST00000321517 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
LINC00476-201ENST00000321517 M0R2T5 61 aa8.58□□□□□ -1.04
LINC00476-201ENST00000321517 A0A087WVE0 104 aa8.57□□□□□ -1.04
LINC00476-201ENST00000321517 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
LINC00476-201ENST00000321517 MT-ATP8P03928 68 aa8.55□□□□□ -1.04
LINC00476-201ENST00000321517 UQCRQO14949 82 aa8.53□□□□□ -1.04
LINC00476-201ENST00000321517 SPINK7P58062 85 aa8.5□□□□□ -1.05
LINC00476-201ENST00000321517 Q5W150 140 aa8.5□□□□□ -1.05
LINC00476-201ENST00000321517 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
LINC00476-201ENST00000321517 C7orf65Q6ZTY9 151 aa8.48□□□□□ -1.05
LINC00476-201ENST00000321517 TRAV22A0A0B4J277 110 aa8.47□□□□□ -1.05
LINC00476-201ENST00000321517 ATOX1O00244 68 aa8.47□□□□□ -1.05
LINC00476-201ENST00000321517 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
LINC00476-201ENST00000321517 OCR1Q9BZK8 76 aa8.44□□□□□ -1.06
LINC00476-201ENST00000321517 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
LINC00476-201ENST00000321517 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
LINC00476-201ENST00000321517 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
LINC00476-201ENST00000321517 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
LINC00476-201ENST00000321517 HRES1P13985 223 aa8.41□□□□□ -1.06
LINC00476-201ENST00000321517 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
LINC00476-201ENST00000321517 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.06
LINC00476-201ENST00000321517 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.06
LINC00476-201ENST00000321517 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.06
LINC00476-201ENST00000321517 MP68P56378 58 aa8.39□□□□□ -1.07
LINC00476-201ENST00000321517 H0Y9P7 68 aa8.38□□□□□ -1.07
LINC00476-201ENST00000321517 H3BPC8 53 aa8.38□□□□□ -1.07
LINC00476-201ENST00000321517 KRTAP9-8Q9BYQ0 159 aa8.37□□□□□ -1.07
LINC00476-201ENST00000321517 USH2AO75445 5202 aa8.34□□□□□ -1.07
LINC00476-201ENST00000321517 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
LINC00476-201ENST00000321517 SSPOA2VEC9 5147 aa8.34□□□□□ -1.07
LINC00476-201ENST00000321517 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
LINC00476-201ENST00000321517 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
LINC00476-201ENST00000321517 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
LINC00476-201ENST00000321517 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
LINC00476-201ENST00000321517 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
LINC00476-201ENST00000321517 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
LINC00476-201ENST00000321517 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
LINC00476-201ENST00000321517 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.1
LINC00476-201ENST00000321517 MT2AP02795 61 aa8.21□□□□□ -1.1
LINC00476-201ENST00000321517 C4orf26Q17RF5 130 aa8.2□□□□□ -1.1
LINC00476-201ENST00000321517 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
LINC00476-201ENST00000321517 LCE2BO14633 110 aa8.15□□□□□ -1.1
LINC00476-201ENST00000321517 MT1FP04733 61 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms