RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
CDHR3-201ENST00000317716 K7ERS5 55 aa4.62□□□□□ -1.67
CDHR3-201ENST00000317716 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP21-3Q3LHN1 58 aa4.61□□□□□ -1.67
CDHR3-201ENST00000317716 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
CDHR3-201ENST00000317716 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
CDHR3-201ENST00000317716 Q8N1X5 172 aa4.61□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP7-1Q8IUC3 87 aa4.61□□□□□ -1.67
CDHR3-201ENST00000317716 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
CDHR3-201ENST00000317716 NBDYA0A0U1RRE5 68 aa4.6□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-201ENST00000317716 C1orf134Q5TEV5 83 aa4.6□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP1-5Q9BYS1 174 aa4.6□□□□□ -1.67
CDHR3-201ENST00000317716 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
CDHR3-201ENST00000317716 A0A087X002 238 aa4.59□□□□□ -1.67
CDHR3-201ENST00000317716 NOTCH2NLQ7Z3S9 236 aa4.59□□□□□ -1.67
CDHR3-201ENST00000317716 PSORS1C2Q9UIG4 136 aa4.59□□□□□ -1.67
CDHR3-201ENST00000317716 LINC01554Q52M75 96 aa4.59□□□□□ -1.68
CDHR3-201ENST00000317716 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
CDHR3-201ENST00000317716 SSBP3-AS1Q7Z2R9 100 aa4.58□□□□□ -1.68
CDHR3-201ENST00000317716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-201ENST00000317716 PANO1I0J062 215 aa4.57□□□□□ -1.68
CDHR3-201ENST00000317716 Q96NJ1 140 aa4.57□□□□□ -1.68
CDHR3-201ENST00000317716 LCE6AA0A183 80 aa4.56□□□□□ -1.68
CDHR3-201ENST00000317716 APLNQ9ULZ1 77 aa4.56□□□□□ -1.68
CDHR3-201ENST00000317716 A6NN06 94 aa4.56□□□□□ -1.68
CDHR3-201ENST00000317716 FAM229AH3BQW9 127 aa4.56□□□□□ -1.68
CDHR3-201ENST00000317716 CMYA5Q8N3K9 4069 aa4.54□□□□□ -1.68
CDHR3-201ENST00000317716 ZNF861PO60384 105 aa4.54□□□□□ -1.68
CDHR3-201ENST00000317716 Q5W150 140 aa4.53□□□□□ -1.68
CDHR3-201ENST00000317716 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
CDHR3-201ENST00000317716 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
CDHR3-201ENST00000317716 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-201ENST00000317716 DNAH9Q9NYC9 4486 aa4.51□□□□□ -1.69
CDHR3-201ENST00000317716 C9orf92A6NGG3 77 aa4.5□□□□□ -1.69
CDHR3-201ENST00000317716 A0A087WTM6 91 aa4.49□□□□□ -1.69
CDHR3-201ENST00000317716 A0A0D9SG42 100 aa4.49□□□□□ -1.69
CDHR3-201ENST00000317716 SPRR1BP22528 89 aa4.47□□□□□ -1.69
CDHR3-201ENST00000317716 TYMSOSQ8TAI1 123 aa4.47□□□□□ -1.69
CDHR3-201ENST00000317716 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
CDHR3-201ENST00000317716 IGLV7-43P04211 117 aa4.46□□□□□ -1.7
CDHR3-201ENST00000317716 LYSTQ99698 3801 aa4.45□□□□□ -1.7
CDHR3-201ENST00000317716 Q6ZR54 194 aa4.45□□□□□ -1.7
CDHR3-201ENST00000317716 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
CDHR3-201ENST00000317716 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
CDHR3-201ENST00000317716 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
CDHR3-201ENST00000317716 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
CDHR3-201ENST00000317716 A0A1B0GU33 70 aa4.39□□□□□ -1.71
CDHR3-201ENST00000317716 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
CDHR3-201ENST00000317716 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
CDHR3-201ENST00000317716 KMT2AQ03164 3969 aa4.35□□□□□ -1.71
CDHR3-201ENST00000317716 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.72
CDHR3-201ENST00000317716 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
CDHR3-201ENST00000317716 LINC00304Q8N9R0 145 aa4.33□□□□□ -1.72
CDHR3-201ENST00000317716 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
CDHR3-201ENST00000317716 KRTAP10-1P60331 282 aa4.31□□□□□ -1.72
CDHR3-201ENST00000317716 LINC00483Q53H64 154 aa4.31□□□□□ -1.72
CDHR3-201ENST00000317716 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
CDHR3-201ENST00000317716 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
CDHR3-201ENST00000317716 Q6ZRN7 208 aaPredicted RBP4.29□□□□□ -1.72
CDHR3-201ENST00000317716 HYDINQ4G0P3 5121 aa4.28□□□□□ -1.72
CDHR3-201ENST00000317716 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
CDHR3-201ENST00000317716 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
CDHR3-201ENST00000317716 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
CDHR3-201ENST00000317716 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
CDHR3-201ENST00000317716 ROMO1P60602 79 aa4.22□□□□□ -1.73
CDHR3-201ENST00000317716 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
CDHR3-201ENST00000317716 DNAH1Q9P2D7 4330 aa4.22□□□□□ -1.73
CDHR3-201ENST00000317716 VPS13DQ5THJ4 4388 aa4.21□□□□□ -1.74
CDHR3-201ENST00000317716 A8MUU9 505 aa4.21□□□□□ -1.74
CDHR3-201ENST00000317716 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
CDHR3-201ENST00000317716 Q6ZSA8 131 aa4.2□□□□□ -1.74
CDHR3-201ENST00000317716 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
CDHR3-201ENST00000317716 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
CDHR3-201ENST00000317716 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
CDHR3-201ENST00000317716 H0YAA0 97 aa4.18□□□□□ -1.74
CDHR3-201ENST00000317716 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
CDHR3-201ENST00000317716 Q5VSD8 79 aa4.17□□□□□ -1.74
CDHR3-201ENST00000317716 RYR3Q15413 4870 aa4.17□□□□□ -1.74
CDHR3-201ENST00000317716 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
CDHR3-201ENST00000317716 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
CDHR3-201ENST00000317716 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
CDHR3-201ENST00000317716 FAT1Q14517 4588 aa4.14□□□□□ -1.75
CDHR3-201ENST00000317716 J3QL48 77 aa4.14□□□□□ -1.75
CDHR3-201ENST00000317716 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
CDHR3-201ENST00000317716 DNAH5Q8TE73 4624 aa4.14□□□□□ -1.75
CDHR3-201ENST00000317716 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
CDHR3-201ENST00000317716 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
CDHR3-201ENST00000317716 RYR2Q92736 4967 aa4.12□□□□□ -1.75
CDHR3-201ENST00000317716 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
CDHR3-201ENST00000317716 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
CDHR3-201ENST00000317716 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
CDHR3-201ENST00000317716 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
CDHR3-201ENST00000317716 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.76
CDHR3-201ENST00000317716 S4R3F8 94 aa4.08□□□□□ -1.76
CDHR3-201ENST00000317716 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
CDHR3-201ENST00000317716 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
CDHR3-201ENST00000317716 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
CDHR3-201ENST00000317716 KRTAP4-5Q9BYR2 181 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms