RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NBDYA0A0U1RRE5 68 aa7.2□□□□□ -1.26
LDLRAD3-201ENST00000315571 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
LDLRAD3-201ENST00000315571 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
LDLRAD3-201ENST00000315571 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
LDLRAD3-201ENST00000315571 ASB16-AS1Q495Z4 193 aa7.18□□□□□ -1.26
LDLRAD3-201ENST00000315571 RTL8CO15255 209 aa7.18□□□□□ -1.26
LDLRAD3-201ENST00000315571 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
LDLRAD3-201ENST00000315571 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
LDLRAD3-201ENST00000315571 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
LDLRAD3-201ENST00000315571 ROMO1P60602 79 aa7.16□□□□□ -1.26
LDLRAD3-201ENST00000315571 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
LDLRAD3-201ENST00000315571 PLAC8Q9NZF1 115 aa7.16□□□□□ -1.26
LDLRAD3-201ENST00000315571 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
LDLRAD3-201ENST00000315571 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
LDLRAD3-201ENST00000315571 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
LDLRAD3-201ENST00000315571 MRPL34Q9BQ48 92 aaKnown RBP7.14□□□□□ -1.27
LDLRAD3-201ENST00000315571 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
LDLRAD3-201ENST00000315571 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
LDLRAD3-201ENST00000315571 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
LDLRAD3-201ENST00000315571 VPS13DQ5THJ4 4388 aa7.11□□□□□ -1.27
LDLRAD3-201ENST00000315571 LYSTQ99698 3801 aa7.09□□□□□ -1.27
LDLRAD3-201ENST00000315571 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
LDLRAD3-201ENST00000315571 K7ERS5 55 aa7.08□□□□□ -1.28
LDLRAD3-201ENST00000315571 SPRR1AP35321 89 aa7.08□□□□□ -1.28
LDLRAD3-201ENST00000315571 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
LDLRAD3-201ENST00000315571 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
LDLRAD3-201ENST00000315571 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
LDLRAD3-201ENST00000315571 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD3-201ENST00000315571 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
LDLRAD3-201ENST00000315571 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
LDLRAD3-201ENST00000315571 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
LDLRAD3-201ENST00000315571 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
LDLRAD3-201ENST00000315571 A0A087WTM6 91 aa7.02□□□□□ -1.29
LDLRAD3-201ENST00000315571 ZNF861PO60384 105 aa7.02□□□□□ -1.29
LDLRAD3-201ENST00000315571 PLA2G2DQ9UNK4 145 aa7.01□□□□□ -1.29
LDLRAD3-201ENST00000315571 KMT2AQ03164 3969 aa6.98□□□□□ -1.29
LDLRAD3-201ENST00000315571 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
LDLRAD3-201ENST00000315571 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
LDLRAD3-201ENST00000315571 CHTF8P0CG12 524 aa6.96□□□□□ -1.29
LDLRAD3-201ENST00000315571 A0A087X002 238 aa6.96□□□□□ -1.3
LDLRAD3-201ENST00000315571 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
LDLRAD3-201ENST00000315571 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
LDLRAD3-201ENST00000315571 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 Q5W150 140 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 A8MUU9 505 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
LDLRAD3-201ENST00000315571 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
LDLRAD3-201ENST00000315571 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
LDLRAD3-201ENST00000315571 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
LDLRAD3-201ENST00000315571 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
LDLRAD3-201ENST00000315571 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
LDLRAD3-201ENST00000315571 CIRBP-AS1Q8TBR5 109 aa6.91□□□□□ -1.3
LDLRAD3-201ENST00000315571 KMT2CQ8NEZ4 4911 aaKnown RBP6.9□□□□□ -1.31
LDLRAD3-201ENST00000315571 RYR2Q92736 4967 aa6.9□□□□□ -1.31
LDLRAD3-201ENST00000315571 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
LDLRAD3-201ENST00000315571 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
LDLRAD3-201ENST00000315571 DNAH17Q9UFH2 4485 aa6.88□□□□□ -1.31
LDLRAD3-201ENST00000315571 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
LDLRAD3-201ENST00000315571 LINC00483Q53H64 154 aa6.85□□□□□ -1.31
LDLRAD3-201ENST00000315571 P0C880 135 aa6.83□□□□□ -1.32
LDLRAD3-201ENST00000315571 Q8N1X5 172 aa6.83□□□□□ -1.32
LDLRAD3-201ENST00000315571 LINC00304Q8N9R0 145 aa6.83□□□□□ -1.32
LDLRAD3-201ENST00000315571 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
LDLRAD3-201ENST00000315571 FRAS1Q86XX4 4008 aa6.81□□□□□ -1.32
LDLRAD3-201ENST00000315571 A0A1B0GVY2 172 aa6.81□□□□□ -1.32
LDLRAD3-201ENST00000315571 PANO1I0J062 215 aa6.8□□□□□ -1.32
LDLRAD3-201ENST00000315571 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
LDLRAD3-201ENST00000315571 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
LDLRAD3-201ENST00000315571 A0A1B0GU33 70 aa6.8□□□□□ -1.32
LDLRAD3-201ENST00000315571 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
LDLRAD3-201ENST00000315571 SPRR1BP22528 89 aa6.79□□□□□ -1.32
LDLRAD3-201ENST00000315571 Q96NJ1 140 aa6.79□□□□□ -1.32
LDLRAD3-201ENST00000315571 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
LDLRAD3-201ENST00000315571 RYR3Q15413 4870 aa6.77□□□□□ -1.33
LDLRAD3-201ENST00000315571 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
LDLRAD3-201ENST00000315571 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
LDLRAD3-201ENST00000315571 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
LDLRAD3-201ENST00000315571 PSORS1C2Q9UIG4 136 aa6.74□□□□□ -1.33
LDLRAD3-201ENST00000315571 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
LDLRAD3-201ENST00000315571 Q6ZSA8 131 aa6.73□□□□□ -1.33
LDLRAD3-201ENST00000315571 PKD1P98161 4303 aa6.73□□□□□ -1.33
LDLRAD3-201ENST00000315571 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
LDLRAD3-201ENST00000315571 A0A0D9SG42 100 aa6.68□□□□□ -1.34
LDLRAD3-201ENST00000315571 H0YAA0 97 aa6.67□□□□□ -1.34
LDLRAD3-201ENST00000315571 PKHD1P08F94 4074 aa6.65□□□□□ -1.34
LDLRAD3-201ENST00000315571 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
LDLRAD3-201ENST00000315571 LRP1BQ9NZR2 4599 aa6.64□□□□□ -1.35
LDLRAD3-201ENST00000315571 SMR3BP02814 79 aaPredicted RBP6.63□□□□□ -1.35
LDLRAD3-201ENST00000315571 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
LDLRAD3-201ENST00000315571 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
LDLRAD3-201ENST00000315571 TYMSOSQ8TAI1 123 aa6.59□□□□□ -1.35
LDLRAD3-201ENST00000315571 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
LDLRAD3-201ENST00000315571 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
LDLRAD3-201ENST00000315571 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
LDLRAD3-201ENST00000315571 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
LDLRAD3-201ENST00000315571 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
LDLRAD3-201ENST00000315571 Q5VSD8 79 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms