RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 MGAM2Q2M2H8 2515 aa5.87□□□□□ -1.47
RBFOX1-201ENST00000311745 IGLV5-48A0A075B6I7 105 aa5.86□□□□□ -1.47
RBFOX1-201ENST00000311745 A0A087WSZ3 146 aa5.86□□□□□ -1.47
RBFOX1-201ENST00000311745 PKD1P98161 4303 aa5.86□□□□□ -1.47
RBFOX1-201ENST00000311745 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
RBFOX1-201ENST00000311745 A0A1B0GU69 56 aa5.86□□□□□ -1.47
RBFOX1-201ENST00000311745 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
RBFOX1-201ENST00000311745 IGLV8-61A0A075B6I0 122 aa5.84□□□□□ -1.47
RBFOX1-201ENST00000311745 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
RBFOX1-201ENST00000311745 P0C880 135 aa5.84□□□□□ -1.48
RBFOX1-201ENST00000311745 FAT2Q9NYQ8 4349 aa5.83□□□□□ -1.48
RBFOX1-201ENST00000311745 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
RBFOX1-201ENST00000311745 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
RBFOX1-201ENST00000311745 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
RBFOX1-201ENST00000311745 Q6ZRX8 168 aa5.82□□□□□ -1.48
RBFOX1-201ENST00000311745 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
RBFOX1-201ENST00000311745 A0A096LNI7 61 aa5.81□□□□□ -1.48
RBFOX1-201ENST00000311745 A8MWP4 228 aa5.81□□□□□ -1.48
RBFOX1-201ENST00000311745 A0A1B0GW54 56 aa5.8□□□□□ -1.48
RBFOX1-201ENST00000311745 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
RBFOX1-201ENST00000311745 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
RBFOX1-201ENST00000311745 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
RBFOX1-201ENST00000311745 SPRR4Q96PI1 79 aa5.8□□□□□ -1.48
RBFOX1-201ENST00000311745 UQCR11O14957 56 aa5.79□□□□□ -1.48
RBFOX1-201ENST00000311745 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
RBFOX1-201ENST00000311745 PANO1I0J062 215 aa5.78□□□□□ -1.48
RBFOX1-201ENST00000311745 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
RBFOX1-201ENST00000311745 ZNF861PO60384 105 aa5.77□□□□□ -1.49
RBFOX1-201ENST00000311745 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
RBFOX1-201ENST00000311745 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
RBFOX1-201ENST00000311745 IGKV2-24A0A0C4DH68 120 aa5.74□□□□□ -1.49
RBFOX1-201ENST00000311745 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
RBFOX1-201ENST00000311745 NBDYA0A0U1RRE5 68 aa5.73□□□□□ -1.49
RBFOX1-201ENST00000311745 IGFL1Q6UW32 110 aa5.73□□□□□ -1.49
RBFOX1-201ENST00000311745 A0A087X002 238 aa5.72□□□□□ -1.49
RBFOX1-201ENST00000311745 A8MUU9 505 aa5.72□□□□□ -1.49
RBFOX1-201ENST00000311745 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
RBFOX1-201ENST00000311745 LINC00483Q53H64 154 aa5.7□□□□□ -1.5
RBFOX1-201ENST00000311745 PRLHP81277 87 aa5.69□□□□□ -1.5
RBFOX1-201ENST00000311745 SSBP3-AS1Q7Z2R9 100 aa5.69□□□□□ -1.5
RBFOX1-201ENST00000311745 ACYP2P14621 99 aa5.68□□□□□ -1.5
RBFOX1-201ENST00000311745 NUPR2A6NF83 97 aa5.68□□□□□ -1.5
RBFOX1-201ENST00000311745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.68□□□□□ -1.5
RBFOX1-201ENST00000311745 IGLV5-52A0A0A0MRZ9 124 aa5.68□□□□□ -1.5
RBFOX1-201ENST00000311745 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
RBFOX1-201ENST00000311745 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
RBFOX1-201ENST00000311745 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
RBFOX1-201ENST00000311745 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
RBFOX1-201ENST00000311745 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
RBFOX1-201ENST00000311745 SPRR1BP22528 89 aa5.65□□□□□ -1.5
RBFOX1-201ENST00000311745 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
RBFOX1-201ENST00000311745 A0A087WTM6 91 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 TP53AIP1Q9HCN2 124 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 TGP01266 2768 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 PKHD1P08F94 4074 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
RBFOX1-201ENST00000311745 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
RBFOX1-201ENST00000311745 LINC00472Q9H8W2 130 aa5.6□□□□□ -1.51
RBFOX1-201ENST00000311745 LINC00304Q8N9R0 145 aa5.57□□□□□ -1.52
RBFOX1-201ENST00000311745 SPINK1P00995 79 aa5.56□□□□□ -1.52
RBFOX1-201ENST00000311745 Q96NJ1 140 aa5.55□□□□□ -1.52
RBFOX1-201ENST00000311745 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
RBFOX1-201ENST00000311745 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
RBFOX1-201ENST00000311745 C8orf17Q9NRJ1 99 aa5.54□□□□□ -1.52
RBFOX1-201ENST00000311745 PSORS1C2Q9UIG4 136 aa5.53□□□□□ -1.52
RBFOX1-201ENST00000311745 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
RBFOX1-201ENST00000311745 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
RBFOX1-201ENST00000311745 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
RBFOX1-201ENST00000311745 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
RBFOX1-201ENST00000311745 DMBT1Q9UGM3 2413 aaPredicted RBP5.51□□□□□ -1.53
RBFOX1-201ENST00000311745 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
RBFOX1-201ENST00000311745 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
RBFOX1-201ENST00000311745 Q5W150 140 aa5.49□□□□□ -1.53
RBFOX1-201ENST00000311745 K7ERS5 55 aa5.49□□□□□ -1.53
RBFOX1-201ENST00000311745 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
RBFOX1-201ENST00000311745 APOBP04114 4563 aaKnown RBP5.48□□□□□ -1.53
RBFOX1-201ENST00000311745 DYNC1H1Q14204 4646 aaKnown RBP5.48□□□□□ -1.53
RBFOX1-201ENST00000311745 RYR2Q92736 4967 aa5.47□□□□□ -1.53
RBFOX1-201ENST00000311745 Q6ZSA8 131 aa5.47□□□□□ -1.53
RBFOX1-201ENST00000311745 SPINK6Q6UWN8 80 aa5.45□□□□□ -1.54
RBFOX1-201ENST00000311745 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
RBFOX1-201ENST00000311745 LY6G6CO95867 125 aa5.44□□□□□ -1.54
RBFOX1-201ENST00000311745 KRTAP21-3Q3LHN1 58 aa5.43□□□□□ -1.54
RBFOX1-201ENST00000311745 CIRBP-AS1Q8TBR5 109 aa5.43□□□□□ -1.54
RBFOX1-201ENST00000311745 A0A1B0GVX0 72 aa5.43□□□□□ -1.54
RBFOX1-201ENST00000311745 KRTAP10-1P60331 282 aa5.43□□□□□ -1.54
RBFOX1-201ENST00000311745 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
RBFOX1-201ENST00000311745 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
RBFOX1-201ENST00000311745 H0YAA0 97 aa5.4□□□□□ -1.54
RBFOX1-201ENST00000311745 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
RBFOX1-201ENST00000311745 KRTAP3-3Q9BYR6 98 aa5.38□□□□□ -1.55
RBFOX1-201ENST00000311745 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
RBFOX1-201ENST00000311745 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
RBFOX1-201ENST00000311745 FAT1Q14517 4588 aa5.37□□□□□ -1.55
RBFOX1-201ENST00000311745 KRTAP1-4P0C5Y4 121 aa5.36□□□□□ -1.55
RBFOX1-201ENST00000311745 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
RBFOX1-201ENST00000311745 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
RBFOX1-201ENST00000311745 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
RBFOX1-201ENST00000311745 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms