RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 Q8N1X5 172 aa2.95□□□□□ -1.94
UBR1-201ENST00000290650 IGLV5-37A0A075B6J1 123 aa2.94□□□□□ -1.94
UBR1-201ENST00000290650 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 KRTAP10-2P60368 255 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 FAM229AH3BQW9 127 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 PRR26Q8N8Z3 221 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 LINC00304Q8N9R0 145 aa2.93□□□□□ -1.94
UBR1-201ENST00000290650 DMBT1Q9UGM3 2413 aaPredicted RBP2.92□□□□□ -1.94
UBR1-201ENST00000290650 CRIPTQ9P021 101 aa2.91□□□□□ -1.94
UBR1-201ENST00000290650 KRTAP7-1Q8IUC3 87 aa2.91□□□□□ -1.94
UBR1-201ENST00000290650 SPRR1AP35321 89 aa2.91□□□□□ -1.94
UBR1-201ENST00000290650 Q75L30 129 aa2.9□□□□□ -1.95
UBR1-201ENST00000290650 Q8N9P0 234 aaPredicted RBP2.89□□□□□ -1.95
UBR1-201ENST00000290650 KRTAP10-1P60331 282 aa2.89□□□□□ -1.95
UBR1-201ENST00000290650 KRTAP16-1A8MUX0 517 aa2.89□□□□□ -1.95
UBR1-201ENST00000290650 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
UBR1-201ENST00000290650 KRTAP4-16G5E9R7 235 aaPredicted RBP2.88□□□□□ -1.95
UBR1-201ENST00000290650 SRRM2Q9UQ35 2752 aaKnown RBP2.88□□□□□ -1.95
UBR1-201ENST00000290650 A0A087X002 238 aa2.88□□□□□ -1.95
UBR1-201ENST00000290650 NOTCH2NLQ7Z3S9 236 aa2.88□□□□□ -1.95
UBR1-201ENST00000290650 SPANXA2-OT1Q8N9U9 137 aa2.87□□□□□ -1.95
UBR1-201ENST00000290650 DMAC1Q96GE9 116 aa2.87□□□□□ -1.95
UBR1-201ENST00000290650 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
UBR1-201ENST00000290650 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
UBR1-201ENST00000290650 RYR2Q92736 4967 aa2.87□□□□□ -1.95
UBR1-201ENST00000290650 LINC00472Q9H8W2 130 aa2.86□□□□□ -1.95
UBR1-201ENST00000290650 A0A0D9SG42 100 aa2.86□□□□□ -1.95
UBR1-201ENST00000290650 PLAC8Q9NZF1 115 aa2.86□□□□□ -1.95
UBR1-201ENST00000290650 COL7A1Q02388 2944 aa2.86□□□□□ -1.95
UBR1-201ENST00000290650 HRES1P13985 223 aa2.85□□□□□ -1.95
UBR1-201ENST00000290650 ASB16-AS1Q495Z4 193 aa2.85□□□□□ -1.95
UBR1-201ENST00000290650 SEC61BP60468 96 aaKnown RBP2.85□□□□□ -1.95
UBR1-201ENST00000290650 A8MU10 97 aa2.84□□□□□ -1.96
UBR1-201ENST00000290650 J3QL48 77 aa2.84□□□□□ -1.96
UBR1-201ENST00000290650 ZCCHC13Q8WW36 166 aaKnown RBP2.84□□□□□ -1.96
UBR1-201ENST00000290650 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
UBR1-201ENST00000290650 Q5VV11 94 aa2.82□□□□□ -1.96
UBR1-201ENST00000290650 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
UBR1-201ENST00000290650 Q5W150 140 aa2.82□□□□□ -1.96
UBR1-201ENST00000290650 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
UBR1-201ENST00000290650 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
UBR1-201ENST00000290650 IGLV7-46A0A075B6I9 117 aa2.81□□□□□ -1.96
UBR1-201ENST00000290650 KRTAP29-1A8MX34 341 aaPredicted RBP2.81□□□□□ -1.96
UBR1-201ENST00000290650 SPINK7P58062 85 aa2.8□□□□□ -1.96
UBR1-201ENST00000290650 SPRR1BP22528 89 aa2.8□□□□□ -1.96
UBR1-201ENST00000290650 ANK2Q01484 3957 aa2.8□□□□□ -1.96
UBR1-201ENST00000290650 LCE6AA0A183 80 aa2.79□□□□□ -1.96
UBR1-201ENST00000290650 Q6ZR54 194 aa2.79□□□□□ -1.96
UBR1-201ENST00000290650 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
UBR1-201ENST00000290650 LYSTQ99698 3801 aa2.79□□□□□ -1.96
UBR1-201ENST00000290650 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
UBR1-201ENST00000290650 LINC00483Q53H64 154 aa2.77□□□□□ -1.97
UBR1-201ENST00000290650 Q5VSD8 79 aa2.77□□□□□ -1.97
UBR1-201ENST00000290650 A6NN06 94 aa2.76□□□□□ -1.97
UBR1-201ENST00000290650 MEGF8Q7Z7M0 2845 aa2.76□□□□□ -1.97
UBR1-201ENST00000290650 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
UBR1-201ENST00000290650 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
UBR1-201ENST00000290650 HUWE1Q7Z6Z7 4374 aaKnown RBP2.75□□□□□ -1.97
UBR1-201ENST00000290650 KRTAP13-1Q8IUC0 172 aa2.74□□□□□ -1.97
UBR1-201ENST00000290650 Q6ZSA8 131 aa2.73□□□□□ -1.97
UBR1-201ENST00000290650 DNAH10Q8IVF4 4471 aa2.73□□□□□ -1.97
UBR1-201ENST00000290650 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
UBR1-201ENST00000290650 EPPK1P58107 5090 aaKnown RBP2.72□□□□□ -1.97
UBR1-201ENST00000290650 A0A1B0GU33 70 aa2.72□□□□□ -1.97
UBR1-201ENST00000290650 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
UBR1-201ENST00000290650 S4R3F8 94 aa2.69□□□□□ -1.98
UBR1-201ENST00000290650 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
UBR1-201ENST00000290650 FRAS1Q86XX4 4008 aa2.68□□□□□ -1.98
UBR1-201ENST00000290650 CMYA5Q8N3K9 4069 aa2.68□□□□□ -1.98
UBR1-201ENST00000290650 ROMO1P60602 79 aa2.68□□□□□ -1.98
UBR1-201ENST00000290650 ADM2Q7Z4H4 148 aa2.68□□□□□ -1.98
UBR1-201ENST00000290650 KMT2AQ03164 3969 aa2.67□□□□□ -1.98
UBR1-201ENST00000290650 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
UBR1-201ENST00000290650 M0R2T5 61 aa2.66□□□□□ -1.98
UBR1-201ENST00000290650 DNAH7Q8WXX0 4024 aa2.65□□□□□ -1.98
UBR1-201ENST00000290650 KRTAP1-4P0C5Y4 121 aa2.63□□□□□ -1.99
UBR1-201ENST00000290650 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
UBR1-201ENST00000290650 DNAH9Q9NYC9 4486 aa2.61□□□□□ -1.99
UBR1-201ENST00000290650 PRKDCP78527 4128 aaKnown RBP2.61□□□□□ -1.99
UBR1-201ENST00000290650 R4GN34 69 aa2.61□□□□□ -1.99
UBR1-201ENST00000290650 M0QZ58 72 aa2.6□□□□□ -1.99
UBR1-201ENST00000290650 PLECQ15149 4684 aaKnown RBP2.59□□□□□ -1.99
UBR1-201ENST00000290650 RPL37P61927 97 aaKnown RBP2.59□□□□□ -2
UBR1-201ENST00000290650 RYR3Q15413 4870 aa2.58□□□□□ -2
UBR1-201ENST00000290650 DNAH1Q9P2D7 4330 aa2.58□□□□□ -2
UBR1-201ENST00000290650 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
UBR1-201ENST00000290650 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
UBR1-201ENST00000290650 HERC2O95714 4834 aa2.57□□□□□ -2
UBR1-201ENST00000290650 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
UBR1-201ENST00000290650 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
UBR1-201ENST00000290650 A8MUU9 505 aa2.55□□□□□ -2
UBR1-201ENST00000290650 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
UBR1-201ENST00000290650 A0A1B0GVY2 172 aa2.53□□□□□ -2
UBR1-201ENST00000290650 XP32Q5T750 250 aa2.53□□□□□ -2
UBR1-201ENST00000290650 RPS29P62273 56 aaKnown RBP2.52□□□□□ -2.01
UBR1-201ENST00000290650 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 DNAH11Q96DT5 4516 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 VPS13BQ7Z7G8 4022 aa2.51□□□□□ -2.01
UBR1-201ENST00000290650 DNAH3Q8TD57 4116 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms